EY663271

Overview
NameEY663271
Unique NameEY663271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663271 vs. ExPASy Swiss-Prot
Match: HA22I_ARATH (HVA22-like protein i OS=Arabidopsis thaliana GN=HVA22I PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.294e-26
Identity = 84/245 (34.29%), Postives = 122/245 (49.80%), Query Frame = 3
Query:   12 TYVFASFFRPYVARHENEIDQNLLELRTRAGDMATIYWQRVASYGQTRVFEVLQFIASQSTXXXXXXXXXXXXXXXXXSVPNRXXXXXXXXXXXXXXXXXXXXXXXXXXKETAEEVGPPQVPEGAPGKRIILQKANSTPSTSQ-----RATSAVSVSQKT-TSAASNSQKATSAASTPKPNAVTDITSQP-TPTEAEGMQIDLISPPA---NENSDPP-PKEIVMKET-RVTRGRSMRNRAASNQ 710
            TYV+ SFFRPY+++HEN+ID +LLELRTRAGDMA IYWQRVASYGQTR+ E+LQ++A+QST                 + P +                                     VP+  P +  +   ++S+ S ++     R  S  S  + T TS  +   K        + +  + I + P + T+ E MQI+ +   A   NEN +P  PKE VM+ET R+TRGR  + R+  ++
Sbjct:   87 TYVYESFFRPYLSQHENDIDHSLLELRTRAGDMAVIYWQRVASYGQTRILEILQYVAAQSTPRPQPPQKRGGRANQAPAKPKK-----------------------------------APVPQSEPEEVSLSSSSSSSSSENEGNEPTRKVSGPSRPRPTVTSVPAADPKNAGTTQIAQKSVASPIVNPPQSTTQVEPMQIEEVEGEAESGNENPNPEGPKETVMEETIRMTRGRLRKTRSEESR 296          
BLAST of EY663271 vs. ExPASy Swiss-Prot
Match: HA22H_ARATH (HVA22-like protein h OS=Arabidopsis thaliana GN=HVA22H PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.876e-20
Identity = 80/242 (33.06%), Postives = 115/242 (47.52%), Query Frame = 3
Query:   12 TYVFASFFRPYVARHENEIDQNLLELRTRAGDMATIYWQRVASYGQTRVFEVLQFIASQSTXXXXXXXXXXXXXXXXXSVPNRXXXXXXXXXXXXXXXXXXXXXXXXXXKE---TAEEVGPPQVPEGAPGKRIILQKANSTPSTSQRATSAVSVSQKTTSAASN-----SQKATSAASTPKPNAVTDITSQPTPTEAE--GMQIDLISPPANE-NSDPPPKEIVMKET-RVTRGRSMRNRAA 701
            TYV+ SFF+PYVA+HENEID++L+ELRT+AGD+A IY ++  SYGQTR+ E+L F+A QST                 + P                            K    T E + P   P  +P K+  LQ      + ++ A ++VS ++ TT               S  +  K NA     +QP+PTEAE     +  +  PA+E       KE +M+ET R+TRG   + R+A
Sbjct:   87 TYVYDSFFQPYVAKHENEIDRSLIELRTKAGDLAVIYCRKAVSYGQTRIVEILHFVALQST------PKPKPKEKKQAAAPEEEEQKQPDLKATSQAASSNPQVRLQSKKPQLVTKEPISPK--PLSSPRKQQQLQ------TETKEAKASVSQTKLTTLTPPGPPPPPPPPPPSPTTAAKRNA---DPAQPSPTEAEEASQTVAALPEPASEIQRASSSKETIMEETLRITRGSLRKARSA 311          
BLAST of EY663271 vs. ExPASy Swiss-Prot
Match: HA22G_ARATH (Putative HVA22-like protein g OS=Arabidopsis thaliana GN=HVA22G PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 38/61 (62.30%), Postives = 51/61 (83.61%), Query Frame = 3
Query:   12 TYVFASFFRPYVARHENEIDQNLLELRTRAGDMATIYWQRVASYGQTRVFEVLQFIASQST 194
            TYV+ SFFRPY+A+HENEID+NL++++TRA DMA IY Q+  + GQT+ FE+LQ+I  QST
Sbjct:   76 TYVYDSFFRPYIAKHENEIDRNLVKVKTRAKDMAMIYLQKAINQGQTKFFEILQYITEQST 136          
The following BLAST results are available for this feature:
BLAST of EY663271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
HA22I_ARATH1.294e-2634.29HVA22-like protein i OS=Arabidopsis thaliana GN=HV... [more]
HA22H_ARATH6.876e-2033.06HVA22-like protein h OS=Arabidopsis thaliana GN=HV... [more]
HA22G_ARATH2.070e-1662.30Putative HVA22-like protein g OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-053-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663271 ID=EY663271; Name=EY663271; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGACATATGTTTTTGCTTCTTTCTTTAGACCATATGTTGCA
AGGCATGAGAATGAGATTGATCAGAACTTGTTGGAACTGAGGACTAGAGC
CGGAGATATGGCAACTATATATTGGCAAAGAGTGGCCAGCTACGGCCAGA
CAAGAGTTTTTGAGGTTTTGCAGTTCATTGCTTCACAGTCGACACCTAGG
CCTCGCCCTGCCCAGCCACAACAAAATGCTAGGGCTCGCCAACCCTCTGT
TCCCAACCGCCAACCACCTACCACAACACAACCAGAAACTGAAGAACCAC
CTTCGCCTGAATCTAGCATGTCTTCAAGTCAGCACCAAAAGGAGACAGCT
GAAGAAGTGGGTCCCCCACAAGTGCCTGAAGGAGCTCCAGGAAAGAGAAT
CATTCTGCAAAAAGCAAATTCTACACCTTCAACATCTCAAAGAGCTACTT
CTGCGGTCTCAGTCTCTCAAAAAACTACTTCTGCAGCCTCAAACTCTCAA
AAAGCTACTTCTGCGGCCTCAACCCCAAAACCAAATGCTGTGACAGATAT
TACCAGTCAGCCTACACCAACTGAAGCAGAAGGAATGCAGATTGATCTAA
TATCTCCTCCAGCGAATGAAAACTCGGATCCTCCTCCAAAGGAGATCGTC
ATGAAAGAAACCCGTGTAACACGTGGCAGATCGATGAGAAACCGCGCAGC
ATCAAACCAAAAAGAGTGATGTTTAATCTTTCCCAGTTTTAATATAAAGA
GCTAGCATTTAATCTGTAGGTGAATGTTGATATTACCCTGGTAGATATTG
ACGGAATTTGNTCAATTTCATTGNTGCTTTATTTTTTGAATTTGAGACGC
CGATTAATTGCAAATGTGGGTTGTACCGGGTANGGAAACTGACTTATCAA
ACTAAAGGACG
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