EY663230

Overview
NameEY663230
Unique NameEY663230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9833 contig Csv1_Contig9833:565..1325. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP5_ARATH (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.467e-57
Identity = 79/93 (84.95%), Postives = 90/93 (96.77%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNPHKILQPVAAA 383
            ++ SLPNSRIMIHQPLGGAQGGQ+DID+QANEMLHHKANLNGYL+YHTGQ+LEKIN+DTDRDFFMSA+EAK+YGLIDGV+MNP K LQP+AAA
Sbjct:  206 KRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298

HSP 2 Score: 73.1738 bits (178), Expect = 6.467e-57
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AIFDT+RHI+PDVSTVCVGLAASMGAFLLSAGTKGKR
Sbjct:  171 AIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKR 207
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP2_ANASP (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.293e-36
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ SLP+SRIMIHQPLGGAQG   DI++QA E+L+ KA LN  L+ HTGQ LE+I  DTDRDFFMSA+EAK+YGLID V+
Sbjct:  137 KRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 216

HSP 2 Score: 62.7734 bits (151), Expect = 4.293e-36
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DTI+ I+PDV T+C GLAASMGAFLL+AGTKGKR
Sbjct:  102 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKR 138
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP3_ANAVT (ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP3 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 4.300e-36
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ SLP+SRIMIHQPLGGAQG   DI++QA E+L+ KA LN  L+ HTGQ LE+I  DTDRDFFMSA+EAK+YGLID V+
Sbjct:  119 KRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 198

HSP 2 Score: 62.7734 bits (151), Expect = 4.300e-36
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DTI+ I+PDV T+C GLAASMGAFLL+AGTKGKR
Sbjct:   84 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKR 120
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNP6 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.307e-36
Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ SL +SRIMIHQPLGGAQG   DI++QANE+L+ K NLN  L+  TGQ L +I +DTDRDFFMSA EA +YGLID V+
Sbjct:  109 KRTSLAHSRIMIHQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVEYGLIDRVI 188

HSP 2 Score: 68.5514 bits (166), Expect = 4.307e-36
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    4 IFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKRT 114
            IFDT+ HI+PDVSTVCVGLAASMGAFLL+AG KGKRT
Sbjct:   75 IFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRT 111
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNE7 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.307e-36
Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ SL +SRIMIHQPLGGAQG   DI++QANE+L+ K NLN  L+  TGQ L +I +DTDRDFFMSA EA +YGLID V+
Sbjct:  109 KRTSLAHSRIMIHQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVEYGLIDRVI 188

HSP 2 Score: 68.5514 bits (166), Expect = 4.307e-36
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 1 
Query:    4 IFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKRT 114
            IFDT+ HI+PDVSTVCVGLAASMGAFLL+AG KGKRT
Sbjct:   75 IFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRT 111
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP1_THEEB (ATP-dependent Clp protease proteolytic subunit 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.594e-36
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 3 
Query:  105 EKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVV 344
            ++ +LPN+RIMIHQPLGGAQG   DI++QA E+L+HK  LN  LS HTGQ +E+I  DT+RDFFMSA+EAK YGLID VV
Sbjct:  142 KRMALPNARIMIHQPLGGAQGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAKAYGLIDQVV 221

HSP 2 Score: 62.003 bits (149), Expect = 5.594e-36
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++HI+PDV T+C GLAASMGAFLLS GT GKR
Sbjct:  107 AIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKR 143
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.609e-36
Identity = 53/90 (58.89%), Postives = 68/90 (75.56%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNPHKILQPVAAA 383
            +LP++RIMIHQPLGGAQG  +DI++QA E+L  K +LN  L+YHTGQ LE+I  DTDRD FM+ ++AK+YGLID V+    K  QP  AA
Sbjct:  112 ALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI---SKRPQPTLAA 198

HSP 2 Score: 68.5514 bits (166), Expect = 5.609e-36
Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++HIQPDVST+C+GLAASMGAFLL+ GTKGKR
Sbjct:   74 AIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKR 110
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.304e-36
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 3 
Query:  114 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNPHKILQPVAA 380
            SLPNSRIMIHQPLGGAQG  SDI +QANE+L  K  L+G LS HTGQ  +KI+EDTDRDFFMS  +AK+YGL+D VV +  ++ +  AA
Sbjct:  114 SLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVVASRDELEKAEAA 202

HSP 2 Score: 58.5362 bits (140), Expect = 7.304e-36
Identity = 25/37 (67.57%), Postives = 34/37 (91.89%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            A++DT+++I+PDV+TVC+G AASMGA LL+AG KGKR
Sbjct:   76 AVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKR 112
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.556e-35
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 3 
Query:   99 QREKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNP 353
            Q ++ +LP++RIMIHQPLGGAQG   DI++QA E+L+HK+ LN  L+ HTGQ LEKI  DTDRDFFMS +EAK YGLID V+  P
Sbjct:  143 QGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRP 227

HSP 2 Score: 57.7658 bits (138), Expect = 3.556e-35
Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ + PDV+T+C GLAASMGAFLLS G +GKR
Sbjct:  110 AIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKR 146
[Close]
BLAST of EY663230 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.556e-35
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 3 
Query:   99 QREKNSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAQEAKDYGLIDGVVMNP 353
            Q ++ +LP++RIMIHQPLGGAQG   DI++QA E+L+HK+ LN  L+ HTGQ LEKI  DTDRDFFMS +EAK YGLID V+  P
Sbjct:  143 QGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRP 227

HSP 2 Score: 57.7658 bits (138), Expect = 3.556e-35
Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 AIFDTIRHIQPDVSTVCVGLAASMGAFLLSAGTKGKR 111
            AI+DT++ + PDV+T+C GLAASMGAFLLS G +GKR
Sbjct:  110 AIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKR 146
The following BLAST results are available for this feature:
BLAST of EY663230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP5_ARATH6.467e-5784.95ATP-dependent Clp protease proteolytic subunit 5, ... [more]
CLPP2_ANASP4.293e-3667.50ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_ANAVT4.300e-3667.50ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP1_SYNP64.307e-3663.75ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_SYNE74.307e-3663.75ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_THEEB5.594e-3666.25ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP2_SYNJB5.609e-3658.89ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_DESAH7.304e-3664.04ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNP63.556e-3563.53ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNE73.556e-3563.53ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-052-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663230 ID=EY663230; Name=EY663230; organism=Citrus sinensis; type=EST; length=760bp
GCCATTTTTGATACAATCAGGCACATACAACCGGATGTTTCCACTGTATG
TGTTGGACTGGCAGCCAGTATGGGGGCTTTTCTGCTTAGTGCTGGCACCA
AAGGGAAAAGAACAGTCTTCCAAACTCAAGGATAATGATCCATCAGCCTC
TTGGTGGGGCACAAGGAGGGCAAAGTGATATTGATCTCCAGGCAAATGAG
ATGCTCCATCACAAGGCAAATTTGAATGGGTATCTGTCTTACCATACTGG
TCAAACCCTTGAGAAGATCAACGAGGACACCGATCGCGATTTCTTCATGA
GTGCACAAGAAGCTAAAGACTATGGGCTTATAGATGGTGTCGTCATGAAT
CCGCACAAGATTCTCCAGCCAGTAGCAGCTGCTGCTGGTCAGTGAAAATC
AAGCCAAGTGCGTCAACTTAACTTTGTAACCGTAGCTTTCCCATCCAAAG
GTTTTAGTTTTAGCATTTCTATCAGATACATAGTCCAGTTGGAAAGTTAA
AACACAATGATCAGTAAACCTCTACTGCCTGTTTCATGTACAGATTGGTG
ATTGAATGCTTTTTTAAAACCGTAGGAAAGCCAAAATTATCAACCATTGT
GGGAAATTTCAGTTTTAGGATTCATGTATTGCATGGAATTACATTTTCCC
AATATAATCCATTTTGATGTTGTAAAACCATATGAAGAAATGGCGACACA
AGCTTCATATTGAAATGCTTGAATTGCTCAAAANNAAANCNAANAGGCCC
CAACNAATAA
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