EY662855

Overview
NameEY662855
Unique NameEY662855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13166 contig Csv1_Contig13166:13..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662855 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5)

HSP 1 Score: 94.7449 bits (234), Expect = 7.439e-19
Identity = 64/209 (30.62%), Postives = 96/209 (45.93%), Query Frame = 1
Query:  163 DHRLVYTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKVFFFITS*YVPQIAPSTNVFYFCIFQDEYPWWSFSDFCSWVIKCFCP*LHIIV---DSSWFGWCWPXQWACLLLLVYGICSSFNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 780
            D    +T+DEA+  +GFG+FQ      +G+ W ++AME+M+LS + PA+  EWG        +TT VF+GM++ +  WG I D +GRRK   F T                CI                VI    P  ++++     + FG     Q    + L      +  R K +V+  +FW  G+V EA LA+ VM    WR L+
Sbjct:   62 DSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFST-------------LVACIM--------------GVISGMSPHFYVLLFFRGLTGFGIGGVPQ---SVTLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLAYFVMESFGWRALM 240          
BLAST of EY662855 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18
Identity = 62/201 (30.85%), Postives = 95/201 (47.26%), Query Frame = 1
Query:  178 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKVFFFITS*YVPQIAPSTNVFYFCIFQDEYPWWSFSDFCSWVIKCFCP*LHIIVDSSWFGWCWPXQWACLLLLVYGICSSFNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 780
            + +++A+  +GFGKFQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG +SD YGRR            +I+    ++Y  +        +F+   SW++        ++     FG     Q   L      + S   R K +++   FW  G+V E  LA  VMP L WRWLL
Sbjct:   68 FMVEDAVEAIGFGKFQWKLSMLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMASSSLWGNVSDQYGRRTGL---------KISVIWTLYYGILS-------AFAPVYSWIL--------VLRGLVGFGIGGVPQSVTLYAEFLPMKS---RAKCILLIEIFWALGTVFEVLLAIFVMPTLGWRWLL 241          
BLAST of EY662855 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18
Identity = 61/201 (30.35%), Postives = 95/201 (47.26%), Query Frame = 1
Query:  178 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKVFFFITS*YVPQIAPSTNVFYFCIFQDEYPWWSFSDFCSWVIKCFCP*LHIIVDSSWFGWCWPXQWACLLLLVYGICSSFNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 780
            + +++A+  +GFGKFQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+            +I+    ++Y  +        +F+   SW++        ++     FG     Q   L      + +   R K +++   FW  G+V E  LA  VMP L WRWLL
Sbjct:   68 FMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGL---------KISVLWTLYYGILS-------AFAPVYSWIL--------VLRGLVGFGIGGVPQSVTLYAEFLPMKA---RAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLL 241          
BLAST of EY662855 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18
Identity = 61/201 (30.35%), Postives = 95/201 (47.26%), Query Frame = 1
Query:  178 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKVFFFITS*YVPQIAPSTNVFYFCIFQDEYPWWSFSDFCSWVIKCFCP*LHIIVDSSWFGWCWPXQWACLLLLVYGICSSFNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 780
            + +++A+  +GFGKFQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+            +I+    ++Y  +        +F+   SW++        ++     FG     Q   L      + +   R K +++   FW  G+V E  LA  VMP L WRWLL
Sbjct:   68 FMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGL---------KISVLWTLYYGILS-------AFAPVYSWIL--------VLRGLVGFGIGGVPQSVTLYAEFLPMKA---RAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLL 241          
BLAST of EY662855 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18
Identity = 61/201 (30.35%), Postives = 95/201 (47.26%), Query Frame = 1
Query:  178 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKVFFFITS*YVPQIAPSTNVFYFCIFQDEYPWWSFSDFCSWVIKCFCP*LHIIVDSSWFGWCWPXQWACLLLLVYGICSSFNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 780
            + +++A+  +GFGKFQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+            +I+    ++Y  +        +F+   SW++        ++     FG     Q   L      + +   R K +++   FW  G+V E  LA  VMP L WRWLL
Sbjct:   68 FMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGL---------KISVLWTLYYGILS-------AFAPVYSWIL--------VLRGLVGFGIGGVPQSVTLYAEFLPMKA---RAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLL 241          
BLAST of EY662855 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 63/204 (30.88%), Postives = 95/204 (46.57%), Query Frame = 1
Query:  178 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRR---KVFFFITS*YVPQIAPSTNVFYFCIFQDEYPWWSFSDFCSWVIKCFCP*LHIIVDSSWFGWCWPXQWACLLLLVYGICSSFNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 780
            + +++A+  +GFG+FQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+   K+  F T              Y+ I        +F+   SW++        ++     FG     Q   L      + +   R K +++   FW  G+V E  LA  VMP L WRWLL
Sbjct:   68 FMVEDAVEAIGFGRFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMSSSTLWGNISDQYGRKTGLKISVFWT-------------LYYGILS------AFAPVYSWIL--------VLRGLVGFGIGGVPQSVTLYAEFLPMKA---RAKCILLIEVFWAIGTVFEVLLAVFVMPSLGWRWLL 241          
BLAST of EY662855 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 60/201 (29.85%), Postives = 95/201 (47.26%), Query Frame = 1
Query:  178 YTLDEALTFMGFGKFQGLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRKVFFFITS*YVPQIAPSTNVFYFCIFQDEYPWWSFSDFCSWVIKCFCP*LHIIVDSSWFGWCWPXQWACLLLLVYGICSSFNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLL 780
            + +++A+  +GFG+FQ      +GL W ++AME+MILS + P +  EW         +T+VVF GM+  +  WG ISD YGR+            +I+    ++Y  +        +F+   SW++        ++     FG     Q   L      + +   R K +++   FW  G+V E  LA  VMP L WRWLL
Sbjct:   68 FMVEDAVEAIGFGRFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMSSSTLWGNISDQYGRKTGL---------KISVLWTLYYGILS-------AFAPVYSWIL--------VLRGLVGFGIGGVPQSVTLYAEFLPMKA---RAKCILLIEVFWAIGTVFEVLLAVFVMPSLGWRWLL 241          
The following BLAST results are available for this feature:
BLAST of EY662855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
YOU1_CAEEL7.439e-1930.62Putative transporter ZK637.1 OS=Caenorhabditis ele... [more]
SVOP_XENLA2.827e-1830.85Synaptic vesicle 2-related protein OS=Xenopus laev... [more]
SVOP_PONAB8.225e-1830.35Synaptic vesicle 2-related protein OS=Pongo abelii... [more]
SVOP_HUMAN8.225e-1830.35Synaptic vesicle 2-related protein OS=Homo sapiens... [more]
SVOP_BOVIN8.225e-1830.35Synaptic vesicle 2-related protein OS=Bos taurus G... [more]
SVOP_RAT1.074e-1730.88Synaptic vesicle 2-related protein OS=Rattus norve... [more]
SVOP_MOUSE3.126e-1729.85Synaptic vesicle 2-related protein OS=Mus musculus... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-048-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662855 ID=EY662855; Name=EY662855; organism=Citrus sinensis; type=EST; length=897bp
TTTCGTCAACCCACGCGTCCGGAGCCTCCTTTTCTAGAATTTATGTTTTT
CATATGATTTTCTGCTGTATAGCTTTAAGAATTGAGCTAGGACGTGCCCG
TGACTCTGTGAAGGCAATAATTTCAAATTAATCTGCATGATACTTGCTAT
TCAAAGATGGATGATCATAGACTTGTGTACACGCTGGATGAAGCACTTAC
ATTCATGGGGTTTGGGAAGTTCCAAGGTCTCGCGCTTGCTTATTCTGGGC
TCGGTTGGTTTTCAGAAGCAATGGAGGTTATGATTCTCTCCTTTGTGGGA
CCTGCAGTGAAGTCTGAGTGGGGATTGTCCTCAAGTGAAGAGAGCCTTAT
AACAACTGTTGTTTTTGCTGGAATGTTAGTTGGCGCATATTCATGGGGCC
TTATATCTGACATATATGGAAGAAGGAAGGTTTTCTTCTTTATTACATCC
TGATATGTGCCCCAAATTGCTCCTTCAACCAATGTATTTTATTTTTGCAT
TTTCCAGGATGAGTATCCTTGGTGGAGCTTTAGTGACTTTTGTAGCTGGG
TTATTAAGTGCTTTTGCCCCTAACTACATATCATTGTTGATTCTTCGTGG
TTTGGCTGGTGCTGGCCTGNGCAGTGGGCATGTCTTCTTCTCCTGGTTTA
TGGAATTTGTTCCTCCTTCAATCGAGGAAAGTGGATGGTCGTCTTTTCAA
CTTTCTGGACATTTGGGTCGGTTTCTGAGGCTGCACTTGCTTGGATCGTC
ATGCCAATATTGACTTGGAGGTGGCTACTTGCTTTGTCTGCATACCTGCA
TTTGTTCTGCTTATTTTTATTGNTTTCATGCCAGAAGTCTCCAGATATCT
ATGTACAAAAGGTAGAATACTGATGCGCATAATATTCTGGATAAATA
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