EY662851

Overview
NameEY662851
Unique NameEY662851
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig710 contig Csv1_Contig710:1..922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY662851 vs. ExPASy Swiss-Prot
Match: Y3972_ARATH (Uncharacterized protein At3g49720 OS=Arabidopsis thaliana GN=At3g49720 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.846e-81
Identity = 123/172 (71.51%), Postives = 134/172 (77.91%), Query Frame = 2 
Query:  158 DTGSFPFTGALQSKSRXXXXXXXXXXXXXXXXXXXYAFSGSGIFGGDKAAVSRSEGDFSCTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLXIVSDALDYLSPKYLNKTLPDLARGA 673
            D GSFPF GAL SKSR                   YA+SG GIF   K  VS+  GD+SCT+E+QRAIP+LKKAYGD M KVLHVGPDTCSVVS+LLKEEETEAWGVEPYDIEDAD+ CKS V KG+VRVADIKFPLPYRAKSF L IVSDALDYLSPKYLNKT+P+LAR A
Sbjct:   14 DGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIKE-VSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVEPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVA 184

HSP 2 Score: 80.1073 bits (196), Expect = 6.846e-81
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 1 
Query:  691 IFAGYPGSQRAKVAELSNFGRAAKMKSSXWWIRYFCQTSLKENEPAGEKIKQAASR---KPSSQLSGFHL 891
            +FAG PG QRAKVAELS FGR AKM+S+ WW R+F QT+L+EN+   +K +QA S+   KP+ Q+  FHL
Sbjct:  190 LFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQV--FHL 257
The following BLAST results are available for this feature:
BLAST of EY662851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3972_ARATH6.846e-8171.51Uncharacterized protein At3g49720 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-048-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662851 ID=EY662851; Name=EY662851; organism=Citrus sinensis; type=EST; length=936bp
TGTCTAACCCACGCGTCCGCTATAACATCCTCTCAATGCTGTCCTCTCAT
TTCTCGATCTAAGCTGAACTCTCAATTCGCATCGCTCTCTTCCATCACCA
TCATCTCATTAATCAGTCATGTCGAGGCGTCCTGTGAGTTCAACTCGCCG
ATTAGTCGACACTGGAAGCTTTCCTTTTACTGGAGCTTTGCAGTCCAAAT
CCCGATCTTCACCTCTCCTATCCGTCGGCCTTGTCCTCGTGGGAGCATTC
CTTCTTATCGGCTATGCTTTCAGCGGCTCGGGTATATTTGGAGGCGATAA
AGCAGCTGTTAGTAGGAGCGAAGGTGACTTTTCTTGCACGTCAGAAATCC
AAAGAGCTATACCTATTCTAAAGAAAGCATACGGTGATAGCATGCACAAA
GTTTTACACGTGGGCCCTGATACCTGTTCAGTGGTCTCTACACTGTTGAA
AGAAGAGGAAACCGAAGCATGGGGTGTGGAACCGTATGACATAGAAGATG
CAGATGCTAGGTGCAAGAGCCTTGTGCATAAAGGCATTGTGCGTGTGGCT
GATATCAAGTTCCCCTTGCCTTACCGGGCAAAGTCCTTTCCTCTTGNTAT
TGTATCAGATGCTCTGGATTACCTGTCCCCAAAATACCTAAACAAGACTC
TTCCAGATTTGGCAAGGGGTGCCTTCTGATGGTGTCATTNATTTTTGCAG
GGTACCCTGGNTCACAAAGAGCTAAAGTTGCAGAATTATCCAATTTTGGA
CGGGCGGCAAAAATGAAAAGCTCCNTCTGGTGGATACGCTATTTTTGTCA
AACAAGCTTAAAAGAAAATGAACCTGCTGGGGAGAAAATTAAGCAGGCTG
CATCCAGGAAGCCTTCCAGCCAACTGTCAGGTTTCCATCTCAACCATTAA
GAAAAAAATTATTTGGAACACCATTTTTTGGTTACT
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