EY662825

Overview
NameEY662825
Unique NameEY662825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig454 contig Csv1_Contig454:566..1307. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY662825 vs. ExPASy Swiss-Prot
Match: Y4744_ARATH (Uncharacterized protein At4g06744 OS=Arabidopsis thaliana GN=At4g06744 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.891e-37
Identity = 82/165 (49.70%), Postives = 107/165 (64.85%), Query Frame = 2 
Query:   35 LLEVLFLNNFFTGCLPYEIGFLSNSTVFDVGNNRLTGPIPHSFGCLSGMQFLNLAMNQFYGPVPEIVCQL--PKLVNLSLSYNYFTQVGPECRKLIKRKVLDVRMNCILDLPNQRSREECGKFFSESKK--CPNERSLTLVPCARNRYTLNLTETFDKKLTAPAP 517
            L EVLFLNN FTGC+P+EIGFL+ ++V D+G N+LTGP+P S  CL  ++ LN A N  +G VPE VC L    LVNLSLS NYFT VGP CR L+++ VLDV  NCI   P QRS +EC +FF + KK  CP+    +   C  +  + + +  F   + AP+P
Sbjct:  241 LTEVLFLNNDFTGCIPHEIGFLTGASVIDIGGNKLTGPLPLSLMCLEKVEQLNFAGNLLFGAVPEAVCMLLRDNLVNLSLSDNYFTHVGPWCRGLLEKGVLDVGNNCIPFFPGQRSMQECAEFFVKPKKYYCPHMWFHSFFSCRYSHISSSSSSAF-MPMVAPSP 404
The following BLAST results are available for this feature:
BLAST of EY662825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4744_ARATH9.891e-3749.70Uncharacterized protein At4g06744 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-048-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662825 ID=EY662825; Name=EY662825; organism=Citrus sinensis; type=EST; length=742bp
CCACGCGTCCGGCAGCATTGTTACAGCTAAATACCTGCTAGAAGTGCTTT
TCCTGAACAACTTCTTTACAGGTTGCTTGCCATATGAGATAGGCTTTCTG
AGCAACTCTACAGTTTTTGATGTGGGCAACAACCGCTTGACTGGCCCGAT
ACCGCACTCATTCGGATGCTTGTCCGGCATGCAATTCCTGAACTTGGCTA
TGAACCAATTTTACGGGCCAGTGCCGGAGATTGTGTGCCAGCTGCCGAAG
CTTGTCAACCTGTCTCTGTCTTACAATTATTTTACTCAGGTTGGTCCTGA
ATGCAGGAAATTGATAAAGAGAAAGGTTCTTGATGTGAGAATGAACTGCA
TTTTGGATCTTCCGAATCAGAGATCGCGGGAGGAGTGCGGGAAATTCTTC
TCCGAGTCAAAGAAGTGTCCGAACGAGAGGTCGTTGACTTTGGTTCCTTG
TGCGAGGAATCGTTATACATTGAATTTAACCGAGACGTTTGATAAAAAAT
TAACGGCTCCAGCTCCATCACCTAGGACTTATGATGCCCTCAAAAAGCAT
TTCTGATGATACCTATCATCATATGTAGTGCAACCAAATCTGCATTCATC
CAAGATGATTGATTGTTGCTATTTGTACGTAATTCTCCTACGTTTCTAAG
TGATTTATATGTTCTCCGTAGAAGCCATGTAAACTAGTTATTTCCAATCC
AATAAATCAATTTTTATTTAAAAAAAAAAAAAAAAAAAAAAA
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