EY662743

Overview
NameEY662743
Unique NameEY662743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7372 contig Csv1_Contig7372:17..889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMP1B_ARATH (Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 5.476e-96
Identity = 179/257 (69.65%), Postives = 206/257 (80.16%), Query Frame = 2
Query:  110 SALFTGAPLSLSPSSTG--RQARCPKKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK-SERDQ*TP*KYGFGGGER 871
            S  F GAP++ S  S    + +  P++  V AK++SGLEEA+RIR+ REL+T +K R+ PPLRRGRVSPRL VPDHIP+PPYV S  LPD+S E+QI   E IAKMRA CELAARVL+ AG LV+PSVTTNEIDKAVH MIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQ GDIINIDVTVYL+GYHGDTS+TF    V +G KRLVKVTEECL++GIAVCKDGA+FKK  +R      K+G+   ER
Sbjct:   30 SRCFLGAPVTSSSLSLSGKKNSYSPRQFHVSAKKVSGLEEAIRIRKMRELETKSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRLVKVTEECLERGIAVCKDGASFKKIGKRISEHAEKFGYNVVER 286          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMP1C_ARATH (Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 4.359e-77
Identity = 143/198 (72.22%), Postives = 166/198 (83.84%), Query Frame = 2
Query:  224 AMRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            ++RI+R ++LQ+T + R  PPL  G VSPRL VPDHI KP YV S+ +P++S E QI DS  I KM+  CELAARVLD AG LVRP VTT+EIDKAVHQM+IE GAYPSPLGYGGFPKSVCTSVNECM HGIPDSR LQ+GDIINIDV VYL+GYHGDTSKTFL  +V+  LK+LVKVTEECL+KGI+VCKDGA+FK+
Sbjct:   43 SLRIKRIQQLQSTLEDRINPPLVCGTVSPRLSVPDHILKPLYVESSKVPEISSELQIPDSIGIVKMKKACELAARVLDYAGTLVRPFVTTDEIDKAVHQMVIEFGAYPSPLGYGGFPKSVCTSVNECMFHGIPDSRPLQNGDIINIDVAVYLDGYHGDTSKTFLCGDVNGSLKQLVKVTEECLEKGISVCKDGASFKQ 240          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMP1D_ARATH (Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.244e-65
Identity = 129/207 (62.32%), Postives = 150/207 (72.46%), Query Frame = 2
Query:  197 AKRISGLEEAMRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            ++  SGL + +  RR  +     K RKR  LR G VSPR PVP HI KPPYV S   P +S   ++HD + I  MRA   LAARV D AG LV+P VTT+EID+AVH MIIE GAYPSPLGYGGFPKSVCTSVNEC+CHGIPDSR L+DGDIINIDVTVYLNGYHGDTS TF   NV +  K+LV+VT+E L K I++C  G  +KK
Sbjct:   45 SRTFSGLTDLLFNRRNEDEVIDGK-RKR--LRPGNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAARVRDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFFCGNVDEKAKKLVEVTKESLDKAISICGPGVEYKK 248          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMP1D_DICDI (Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=map1d PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.109e-51
Identity = 105/197 (53.30%), Postives = 130/197 (65.99%), Query Frame = 2
Query:  236 RRERELQTTTKFRKRPPLRRGR-VSPRLPVPDHIPKPPYVSSTSLPD--LSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            R+ER   TT  +R    L RG  VSP+  +P HI KP YV    + D  +    +IH +ESI  MR V ++A  VL+ AG LVRP +TT+EIDK VHQ II+ GAYPSPLGY GFPKS+CTS+NE +CHGIPD R L+ GDI+ IDVT+Y NGYHGDT  TF +  +    KRL++ TE+ L   I   KDGA F K
Sbjct:  104 RKERRKMTTKLYRNPDNLIRGGIVSPQPLIPAHIKKPKYVLGEPVIDFEIDDPIEIHTAESIEHMRVVGKMAKEVLEYAGTLVRPGITTDEIDKLVHQNIIDRGAYPSPLGYKGFPKSICTSINEVLCHGIPDDRPLEFGDIVKIDVTLYYNGYHGDTCATFPVGEIDSSSKRLIEATEKALYAAIGEVKDGALFNK 300          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMP1D_HUMAN (Methionine aminopeptidase 1D, mitochondrial OS=Homo sapiens GN=MAP1D PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.543e-50
Identity = 97/170 (57.06%), Postives = 118/170 (69.41%), Query Frame = 2
Query:  302 VSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANF 811
            VS   PVP HI KP YV++  +PD     ++ + + I  +   C+LA  VL  AGK ++  +TT EID  VH+ II   AYPSPLGYGGFPKSVCTSVN  +CHGIPDSR LQDGDIINIDVTVY NGYHGDTS+TFL+ NV +  K+LV+V   C  + IA C+ GA F
Sbjct:   58 VSSAHPVPKHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLHQACQLARHVLLLAGKSLKVDMTTEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPF 227          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMP1D_MOUSE (Methionine aminopeptidase 1D, mitochondrial OS=Mus musculus GN=Map1d PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.933e-50
Identity = 98/170 (57.65%), Postives = 116/170 (68.24%), Query Frame = 2
Query:  302 VSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANF 811
            VSP  PVP  I KP YV++  +PD     ++ D + I  +R  C LA  VL  AGK ++  +TT EID  VH  II   AYPSPLGYG FPKSVCTSVN  +CHGIPDSR LQDGDIINIDVTVY NGYHGDTS+TFL+ NV +  K+LV+V   C  + IA C+ GA F
Sbjct:   58 VSPAHPVPKRIKKPDYVTTGIVPDWGDSIEVKDEDQIQGLREACRLARHVLLLAGKSLKVDMTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDESGKKLVEVARRCRDEAIAACRAGAPF 227          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMP1D_DANRE (Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=map1d PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.252e-48
Identity = 94/172 (54.65%), Postives = 116/172 (67.44%), Query Frame = 2
Query:  287 LRRGRVSPRLPVPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDG 802
            +R   V P  PVP HI +P YVSS+ +P+     +I D E I  +R  C+LA  +L   G  ++  +TT+EID  VHQ  I    YPSPL YGGFPKSVCTSVN  +CHGIPDSR LQDGDIINIDVTVYL GYHGDTS+TFL+ +V+D  ++LV V  +C  + IA C  G
Sbjct:   56 VRPAIVRPAYPVPKHIQRPDYVSSSKVPEWPDYIEIKDEEQIQGLRRACQLARHILLLTGNSLKVGMTTDEIDFIVHQEAIRHNGYPSPLHYGGFPKSVCTSVNNVVCHGIPDSRPLQDGDIINIDVTVYLEGYHGDTSETFLIGSVNDQGRKLVDVARQCRDQAIAACGPG 227          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMP1A_ARATH (Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.725e-44
Identity = 90/185 (48.65%), Postives = 121/185 (65.41%), Query Frame = 2
Query:  284 PLRRGRVSPRLPVPDHIPKP-------PYVSSTSLPDLSPEYQIHDSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            PL++  +S +  VP  I KP       P V   S  DL    +I   E I +MR  C++A  VLDAA +++ P VTT+EID+ VH+  I AG YPSPL Y  FPKS CTSVNE +CHGIPD+R+L+DGDI+N+DVTV   G HGD ++T+ + NV +  ++LVK T ECL+K IA+ K G  F++
Sbjct:  100 PLKQYPISTKRVVPAEIEKPDWAIDGTPKVEPNS--DLQHVVEIKTPEQIQRMRETCKIAREVLDAAARVIHPGVTTDEIDRVVHEATIAAGGYPSPLNYYFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVCYKGCHGDLNETYFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRFRE 282          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_HUMAN (Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 9.174e-43
Identity = 93/193 (48.19%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  260 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVS-----STSLPDLSPEYQIH--DSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            T K R   PL      P  PVP +I +P Y       S S   L    QI    SE I  MR VC LA  VLD A  +++P VTT EID AVH   I    YPSPL Y  FPKS CTSVNE +CHGIPD R LQ+GDI+N+D+T+Y NGYHGD ++TF +  V DG ++LV+ T ECL + I   K G  +++
Sbjct:   84 TGKLRPHYPLM-----PTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRE 271          
BLAST of EY662743 vs. ExPASy Swiss-Prot
Match: AMPM1_PONAB (Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.198e-42
Identity = 93/193 (48.19%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  260 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVS-----STSLPDLSPEYQIH--DSESIAKMRAVCELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLLRNVSDGLKRLVKVTEECLKKGIAVCKDGANFKK 817
            T K R   PL      P  PVP +I +P Y       S S   L    QI    SE I  MR VC LA  VLD A  +++P VTT EID AVH   I    YPSPL Y  FPKS CTSVNE +CHGIPD R LQ+GDI+N+D+T+Y NGYHGD ++TF +  V DG ++LV+ T ECL + I   K G  +++
Sbjct:   84 TGKLRPHYPLM-----PTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDIAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRE 271          
The following BLAST results are available for this feature:
BLAST of EY662743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
AMP1B_ARATH5.476e-9669.65Methionine aminopeptidase 1B, chloroplastic OS=Ara... [more]
AMP1C_ARATH4.359e-7772.22Methionine aminopeptidase 1C, chloroplastic/mitoch... [more]
AMP1D_ARATH2.244e-6562.32Methionine aminopeptidase 1D, chloroplastic/mitoch... [more]
AMP1D_DICDI4.109e-5153.30Methionine aminopeptidase 1D, mitochondrial OS=Dic... [more]
AMP1D_HUMAN4.543e-5057.06Methionine aminopeptidase 1D, mitochondrial OS=Hom... [more]
AMP1D_MOUSE5.933e-5057.65Methionine aminopeptidase 1D, mitochondrial OS=Mus... [more]
AMP1D_DANRE4.252e-4854.65Methionine aminopeptidase 1D, mitochondrial OS=Dan... [more]
AMP1A_ARATH3.725e-4448.65Methionine aminopeptidase 1A OS=Arabidopsis thalia... [more]
AMPM1_HUMAN9.174e-4348.19Methionine aminopeptidase 1 OS=Homo sapiens GN=MET... [more]
AMPM1_PONAB1.198e-4248.19Methionine aminopeptidase 1 OS=Pongo abelii GN=MET... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662743 ID=EY662743; Name=EY662743; organism=Citrus sinensis; type=EST; length=873bp
TTCGTCGACCCACGCGTCCGGAAGAATGGTATCGGCGGCTTCAGTGTCGC
ATGGCCACGGGTCATCTTCCTTCTTACATGGATCTTCAAAACCAAAGTTA
AACTCTGCTTCAGCTCTTTTCACGGGGGCCCCACTGTCGCTCTCTCCATC
CTCCACCGGAAGACAAGCACGTTGTCCGAAGAAACTCGTCGTTCATGCAA
AGAGAATTTCTGGGTTAGAGGAGGCCATGAGAATTAGGAGAGAACGTGAG
CTTCAAACTACAACTAAATTTAGAAAAAGACCACCTTTGAGGCGTGGAAG
GGTATCTCCGCGACTTCCCGTGCCTGATCACATACCCAAGCCTCCTTATG
TAAGTTCAACTTCGCTTCCAGACCTTTCACCTGAGTACCAAATTCACGAT
TCTGAGAGCATTGCTAAAATGAGGGCTGTGTGTGAACTAGCTGCGCGAGT
CCTGGATGCTGCTGGAAAATTGGTCAGGCCATCGGTGACAACCAATGAAA
TTGACAAAGCAGTGCACCAAATGATAATAGAGGCTGGAGCTTATCCTTCA
CCTCTTGGCTATGGAGGATTTCCTAAGAGTGTGTGTACATCAGTTAATGA
ATGCATGTGTCATGGAATACCTGATTCTCGCCAGTTACAGGATGGTGACA
TAATAAACATTGATGTGACAGTTTATTTAAATGGTTACCATGGCGATACA
TCAAAGACATTTCTTTTGCGGAATGTTAGTGATGGGCTTAAACGCCTTGT
GAAAGTTACTGAAGAATGCTTGAAGAAGGGTATAGCAGTTTGTAAAGATG
GTGCTAATTTCAAGAAATCGGAAAGAGATCAGTGAACACCCTGAAAATAT
GGGTTCGGTGGAGGGGAACGTTT
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