EY662719

Overview
NameEY662719
Unique NameEY662719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY662719 vs. ExPASy Swiss-Prot
Match: SEC22_ARATH (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.959e-21
Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 2 
Query:  275 VVNMTMIAPVTDGPPLPEGLDDAPDLIDAGMYTAPFNVLPNNPATGQDDASGLSFD 442
            +V MT+IA VTDG PL EGLDD  DL D+ MY      L  N + GQ+DAS +S +
Sbjct:    1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVE 56

HSP 2 Score: 54.299 bits (129), Expect = 2.959e-21
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 3 
Query:  444 T*PYDCHDIPGRHG*YFTVCDRAYARELRFLYLDHLWNQCERVSEAQSDTAAHSYAVVYSDTCMAKTEQV 653
            T PY  H I      Y T+CDR+Y ++L F YL+ L N+ ERV+    +TAA  YA +  DT + KT+++
Sbjct:   57 TGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFIQKTKKL 126

HSP 3 Score: 28.4906 bits (62), Expect = 2.959e-21
Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 1 
Query:  664 TRSPLIFAEMNDELYDVLQMMTLQDPKVL 750
            TR+    A++NDELY+V Q+MT    +VL
Sbjct:  130 TRTQRNIAKLNDELYEVHQIMTRNVQEVL 158

HSP 4 Score: 25.0238 bits (53), Expect = 2.959e-21
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 2 
Query:  776 SRMSRRAASETRFYADK 826
            S MS R  SE+R YADK
Sbjct:  168 SEMSSRLTSESRIYADK 184
The following BLAST results are available for this feature:
BLAST of EY662719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SEC22_ARATH2.959e-2151.7925.3 kDa vesicle transport protein OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662719 ID=EY662719; Name=EY662719; organism=Citrus sinensis; type=EST; length=881bp
CCACGCGTCCGACCTTAAGTTTTCCCTGCGACTATTACTGACCACATGAT
GGCTATGGATTCGATTGAATTGTTTTGTTTCCGCGAGAATGGTGCTGCCC
ATTCCAAAGAGGATGCATTTAGCTAGATCTGCTCCTTCCTCTTGAGAGTC
TTTTTATGGTTTAGGGTGAATGTCAGCTTTCATTATCTTCTTTGCGGATC
TGGGCTTCGGATGGCTTGACCTATTGCCCTTGAACTGACTTGCTGCCCCT
GATGAAGTCTTTCGTGACGCAATTGTGGTGAATATGACGATGATTGCCCC
TGTTACTGATGGTCCCCCATTGCCGGAGGGACTGGATGATGCACCTGATT
TGATAGATGCTGGTATGTACACTGCTCCATTCAACGTCTTGCCTAACAAT
CCCGCAACAGGACAGGATGATGCTTCAGGGCTGTCATTTGATGACATGAC
CTTATGACTGCCATGATATCCCTGGAAGACACGGTTGATACTTCACAGTG
TGCGACCGCGCTTATGCCAGAGAGCTACGCTTCCTATACTTAGATCACCT
CTGGAACCAATGCGAACGCGTTAGTGAGGCTCAGAGTGATACTGCTGCAC
ACTCTTATGCTGTCGTATACTCCGATACTTGCATGGCGAAGACAGAGCAA
GTGTCTCTGGTACACACGTTCGCCATTGATATTTGCAGAGATGAATGATG
AACTGTATGATGTCCTCCAAATGATGACGCTACAAGACCCGAAGGTCTTG
TTGATTGTCCAAATGGGGACCACCCAGTAGAATGTCCAGGCGGGCTGCAT
CAGAAACACGCTTTTATGCTGATAAGCGAGAGATCTCATCGACAGGTTTG
AGTCTGAATGCGCTCCCGAGGCCTGGGGTTA
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