EY662713

Overview
NameEY662713
Unique NameEY662713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.324e-20
Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILLDSTRSVNLHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCLMLIKNYG------GRELSSVLRFR*ATNQFG 797
            A+I+VGGP+KGTRFRPLSL++PK LFP+ G+PM++H I AC + +     IL+   +   L     ++   L        E+K  G+AG LY       +   S IF+L+ D+CC+FP    L   K +G      G E+ S        NQ+G
Sbjct:    8 AIILVGGPSKGTRFRPLSLDVPKLLFPIAGKPMIYHHIEACSKVENMKEIILIGFFQESVLSKFISETSKQLNVAIRYINEEKVLGTAGGLYHFRDIILEGGPSEIFVLHSDICCAFPLNDLLQFHKQHGRSCTIMGTEIESAY-----ANQYG 156          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: YBB2_SCHPO (Probable mannose-1-phosphate guanyltransferase OS=Schizosaccharomyces pombe GN=SPBC13G1.02 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15
Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQT---------SHRSILLDSTRSVNLHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCL 722
            AVI+VGGP++GTRFRPLS ++PKPLF +GG+ M++H ++A  + ++            S+  D    V  H  S      L+  + +       G+ G LY       K   S++F+++ DVCCSFP Q  L
Sbjct:    5 AVILVGGPSRGTRFRPLSFDVPKPLFKIGGREMIYHHLAALSKIESVKDVFLVGFYDESVFKDFINEVASHFPSFNRIKYLREYNCL-------GTGGGLYHFRDQILKGHTSNVFVMHADVCCSFPLQELL 129          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPAA_XENLA (Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis GN=gmppa-A PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.541e-14
Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILL---DSTRSVNLHCMSPQS--PMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCLMLIKNYGGRELSSVL 767
            AVI++GGP KGTRFRPLS  +PKPLFP+ G PMV H I AC +       +L+       ++N   +  Q    ++++ L     E    G+ G +Y              F++N DVC  FP    L   K +GG +   +L
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALNSFLLKAQQEFKVAIRYLQ----EYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVSMLDFHKQHGGSQSYVIL 142          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.541e-14
Identity = 48/135 (35.56%), Postives = 65/135 (48.15%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILL---DSTRSVN--LHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCLMLIKNYG 743
            AVI++GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC +       +L+        +N  L C      +S++ L     E    G+ G +Y              F++N DVC  FP    L   K +G
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACSKLPNMKEILLIGFYQPNEELNRFLSCAQQDFKISIRYLQ----EYAALGTGGGIYHFRDQILSGGPDAFFVMNADVCSEFPLPEMLDFQKEHG 134          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.432e-14
Identity = 47/128 (36.72%), Postives = 62/128 (48.44%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILL-----DSTRSVNLHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCL 722
            AVI++GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC +       +L+     D   +  L     +  + ++ L     E  P G+ G LY              F+LN DVC  FP    L
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQ----EFTPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAML 127          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.432e-14
Identity = 47/128 (36.72%), Postives = 63/128 (49.22%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILL-----DSTRSVNLHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCL 722
            AVI++GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC +       +L+     D   +  L     +  + ++ L     E  P G+ G LY         +    F+LN DVC  FP    L
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQ----EFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAML 127          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.432e-14
Identity = 47/128 (36.72%), Postives = 62/128 (48.44%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILL-----DSTRSVNLHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCL 722
            AVI++GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC +       +L+     D   +  L     +  + ++ L     E  P G+ G LY              F+LN DVC  FP    L
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQ----EFAPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAML 127          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.432e-14
Identity = 47/128 (36.72%), Postives = 63/128 (49.22%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILL-----DSTRSVNLHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCL 722
            AVI++GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC +       +L+     D   +  L     +  + ++ L     E  P G+ G LY         +    F+LN DVC  FP    L
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQ----EFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAML 127          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.482e-14
Identity = 48/139 (34.53%), Postives = 67/139 (48.20%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILLDSTR-SVNLHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCLMLIKNYGGRELSSVL 767
            AVI++GGP KGTRFRPLS  +PKPLFP+ G PMV H I AC +       +L+   + +  L     ++    K       E    G+ G +Y              F++N DVC +FP    L   K +GG +   +L
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSAFPLVPMLDFHKQHGGSQSYVIL 142          
BLAST of EY662713 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.854e-14
Identity = 48/139 (34.53%), Postives = 66/139 (47.48%), Query Frame = 3
Query:  354 AVIMVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRFQTSHRSILLDSTR-SVNLHCMSPQSPMSLKSLSDI*GEDKPHGSAGALYTSEI*S*KTTRSHIFLLNCDVCCSFPCQRCLMLIKNYGGRELSSVL 767
            AVI++GGP KGTRFRPLS  +PKPLFP+ G PMV H I AC +       +L+   + +  L     ++    K       E    G+ G +Y              F++N DVC  FP    L   K +GG +   +L
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVPMLDFHKQHGGSQSYVIL 142          
The following BLAST results are available for this feature:
BLAST of EY662713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
GMPPA_DICDI9.324e-2037.01Mannose-1-phosphate guanyltransferase alpha OS=Dic... [more]
YBB2_SCHPO5.295e-1535.61Probable mannose-1-phosphate guanyltransferase OS=... [more]
GMPAA_XENLA1.541e-1434.27Mannose-1-phosphate guanyltransferase alpha-A OS=X... [more]
GMPAA_DANRE1.541e-1435.56Mannose-1-phosphate guanyltransferase alpha-A OS=D... [more]
GMPPA_RAT3.432e-1436.72Mannose-1-phosphate guanyltransferase alpha OS=Rat... [more]
GMPPA_PAPAN3.432e-1436.72Mannose-1-phosphate guanyltransferase alpha OS=Pap... [more]
GMPPA_MOUSE3.432e-1436.72Mannose-1-phosphate guanyltransferase alpha OS=Mus... [more]
GMPPA_HUMAN3.432e-1436.72Mannose-1-phosphate guanyltransferase alpha OS=Hom... [more]
GMPPA_XENTR4.482e-1434.53Mannose-1-phosphate guanyltransferase alpha OS=Xen... [more]
GMPAB_XENLA5.854e-1434.53Mannose-1-phosphate guanyltransferase alpha-B OS=X... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-047-C01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662713 ID=EY662713; Name=EY662713; organism=Citrus sinensis; type=EST; length=940bp
GAATTAACTTGCCGACCCACGCGTCCGATTGTTTTTTTTTCCTTTCCCTT
AACAACTTCTTCACCGACATCTATCTATTTTGTTGAACCACGTTCAGCTT
CAGTGTTCACAATCCTTGCAATAACGAATACGCACACGGATACCGCTATA
ATAAGTAGCGATATCTTTGGGTCATACTGTACTAAAGTGGTCCCACTAGA
AGAAGAATCGGATAAATTTCTCAATCTTTCGCTTCTGACACTGAACTCAC
ATTGTCGTCGTTTTTGAAGATTTGAGTTGAATTGTTGCAGATTTTGAGAG
ATCTGGGTTTGTGTTGACTGGAGATGGGGAGCTCGGAGGATGATAAGGTG
GTGGCCGTGATCATGGTGGGTGGTCCCACTAAAGGTACTCGATTCCGGCC
ATTGTCACTGAATATTCCAAAGCCTCTTTTCCCTTTAGGTGGACAGCCAA
TGGTTCATCACCCAATTTCTGCCTGTAAAAGATTCCAAACCTCGCACAGA
TCTATCTTGTTGGATTCTACGAGGAGCGTGAATTTGCATTGTATGTCTCC
TCAATCTCCAATGAGCTTAAAATCCCTGTCAGATATTTGAGGGGAGGACA
AGCCTCATGGTTCAGCTGGGGCACTTTACACTTCAGAGATCTGATCATGA
AAAACCACCCGGTCTCATATCTTCCTGCTGAATTGCGATGTCTGCTGCAG
TTTTCCCTGCCAGAGATGCTTGATGCTCATAAAAAATTATGGGGGAAGGG
AACTATCCTCGGTATTAAGGTTTCGGTGAGCCACCAACCAGTTTGGGGAA
TGGGAACTGAATCAAAACCCATGGAATGGTGGCTTTCCGGAAAAAACTGA
AAGTTTTGGAAGGAACTATAAATTGTGGGGGGACCCATTTTCCCCCAATA
TTTTTATGTTTTCCAGAGGTTTCTTCACGCGAAAAAAAAA
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