EY662330

Overview
NameEY662330
Unique NameEY662330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7784 contig Csv1_Contig7784:1..583. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21
Identity = 40/82 (48.78%), Postives = 64/82 (78.05%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEEREFALYVSSISNELRIPVRYVRQD 583
            A+ILVGGP+KGTRFRPLSL++PK LFP+ G+PM++H I AC ++ N+ +I L+GF++E   + ++S  S +L + +RY+ ++
Sbjct:    8 AIILVGGPSKGTRFRPLSLDVPKLLFPIAGKPMIYHHIEACSKVENMKEIILIGFFQESVLSKFISETSKQLNVAIRYINEE 89          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.316e-20
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEERE-FALYVSSISNELRIPVRYVRQ 580
            AVIL+GGP KGTRFRPLS  +PKPLFP+ G PMV H I AC ++PNL +I L+GFY+  E  + ++     E ++ +RY+++
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQE 85          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.316e-20
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEERE-FALYVSSISNELRIPVRYVRQ 580
            AVIL+GGP KGTRFRPLS  +PKPLFP+ G PMV H I AC ++PNL +I L+GFY+  E  + ++     E ++ +RY+++
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQE 85          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.943e-20
Identity = 41/82 (50.00%), Postives = 60/82 (73.17%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEER-EFALYVSSISNELRIPVRYVRQ 580
            A+IL+GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC ++P++ +I L+GFY+   E   ++ S   E +IP+RY+++
Sbjct:    4 AIILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACAQVPDMKEIMLIGFYQPNDELNRFIYSAQQEFKIPIRYLQE 85          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPAA_XENLA (Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis GN=gmppa-A PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.184e-19
Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEERE-FALYVSSISNELRIPVRYVRQ 580
            AVIL+GGP KGTRFRPLS  +PKPLFP+ G PMV H I AC ++PNL +I L+GFY+  E    ++     E ++ +RY+++
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALNSFLLKAQQEFKVAIRYLQE 85          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19
Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEERE-FALYVSSISNELRIPVRYVRQ 580
            AVIL+GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC ++P + +I L+GFY+  E    ++ +   E  +PVRY+++
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQE 85          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19
Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEERE-FALYVSSISNELRIPVRYVRQ 580
            AVIL+GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC ++P + +I L+GFY+  E    ++ +   E  +PVRY+++
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQE 85          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19
Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEERE-FALYVSSISNELRIPVRYVRQ 580
            AVIL+GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC ++P + +I L+GFY+  E    ++ +   E  +PVRY+++
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQE 85          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19
Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYEERE-FALYVSSISNELRIPVRYVRQ 580
            AVIL+GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC ++P + +I L+GFY+  E    ++ +   E  +PVRY+++
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQE 85          
BLAST of EY662330 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19
Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  338 AVILVGGPTKGTRFRPLSLNIPKPLFPLGGQPMVHHPISACKRIPNLAQIYLVGFYE-EREFALYVSSISNELRIPVRYVRQ 580
            AVIL+GGP KGTRFRPLS  +PKPLFP+ G PM+ H I AC ++PN+ +I L+GFY+   E   ++S    + +I +RY+++
Sbjct:    4 AVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACSKLPNMKEILLIGFYQPNEELNRFLSCAQQDFKISIRYLQE 85          
The following BLAST results are available for this feature:
BLAST of EY662330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
GMPPA_DICDI2.158e-2148.78Mannose-1-phosphate guanyltransferase alpha OS=Dic... [more]
GMPPA_XENTR5.316e-2051.22Mannose-1-phosphate guanyltransferase alpha OS=Xen... [more]
GMPAB_XENLA5.316e-2051.22Mannose-1-phosphate guanyltransferase alpha-B OS=X... [more]
GMPAB_DANRE6.943e-2050.00Mannose-1-phosphate guanyltransferase alpha-B OS=D... [more]
GMPAA_XENLA1.184e-1951.22Mannose-1-phosphate guanyltransferase alpha-A OS=X... [more]
GMPPA_RAT2.020e-1950.00Mannose-1-phosphate guanyltransferase alpha OS=Rat... [more]
GMPPA_PAPAN2.020e-1950.00Mannose-1-phosphate guanyltransferase alpha OS=Pap... [more]
GMPPA_MOUSE2.020e-1950.00Mannose-1-phosphate guanyltransferase alpha OS=Mus... [more]
GMPPA_HUMAN2.020e-1950.00Mannose-1-phosphate guanyltransferase alpha OS=Hom... [more]
GMPAA_DANRE2.020e-1950.00Mannose-1-phosphate guanyltransferase alpha-A OS=D... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662330 ID=EY662330; Name=EY662330; organism=Citrus sinensis; type=EST; length=583bp
CCACGCGTCCGTGTGATTTTTTTTCCTTTCCCTTAACAACTTCTTCACCG
ACATCTATCTATTTTGTTGAACCACGTTCAGCTTCAGTGTTCACAATCCT
TGCAATAACGAATACGCACACGGATACCGCTATAATAAGTAGCGATATCT
TTGGGTCATACTGTACTAAAGCGGTCCCACTAAAAAAAGAATCGGATAAA
TTTCTCAATCTTTCGCTTCTGACACTGAACTCACATTGTCGTCGTTTTTG
AAGATTTGAGTTGAATTGTTGCAGATTTTGAGAGATCTGGGTTTGTGTTG
ACTGGAGATGGGGAGCTCAGAGGATGATAAGGAGGTGGCCGTGATCTTGG
TGGGTGGTCCCACTAAAGGTACTCGATTCCGGCCATTGTCACTGAATATT
CCAAAGCCTCTTTTCCCTTTAGGTGGACAGCCAATGGTTCATCACCCAAT
TTCTGCCTGTAAAAGAATTCCAAACCTCGCACAGATCTATCTTGTTGGAT
TCTACGAGGAGCGTGAATTTGCATTGTATGTCTCCTCAATCTCCAATGAG
CTTAGAATCCCTGTCAGATATGTGAGGCAGGAC
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