EY662324

Overview
NameEY662324
Unique NameEY662324
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7728 contig Csv1_Contig7728:1..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662324 vs. ExPASy Swiss-Prot
Match: SPPA_SYNY3 (Protease 4 homolog OS=Synechocystis sp. (strain PCC 6803) GN=sppA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.125e-23
Identity = 72/274 (26.28%), Postives = 127/274 (46.35%), Query Frame = 3
Query:   30 WGKVEEIRRHVVDFKKSGNFIIGYVPVCGEKEYYLACACEELYAPPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLDNIYGNWLDKVSSTKGKRKEDIERFIND-GVYKVERLKEEGFITNILYDDEVISMLKERLGV-----------QKDKNLPMVDYRKYSGVRRWTLGLTGGGDQIAVIRASGXXXXXXXXXXXXXXXXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWKEI 815
            +  + E+++ ++ FK+SG  I+ Y     E  YYLA   + +   P     + GL  Q  F  G L K GI  Q  R+G YK A +  TR+ +S EN +    LL+ I+  +L  V++ +      ++   +D G+   +    E  +  + Y DEV++ LK+  GV           ++DK    +   +Y  ++ W         +IA++   G                  ++  E +R +R+    KA ++RI+SPGG A A+D++W+E+
Sbjct:  114 YANLSEVQQALIKFKQSGKKIVAYGLNYSELGYYLAATADTILINPMGGVEINGLGAQPIFFTGALAKAGIGVQTLRVGSYKGAVEPYTRENLSPENRQQQQLLLNQIWQIYLTSVANNRSLTVPQLQAIASDQGLLFADIALREKLVDKVTYWDEVLAELKQ-AGVWINDPEKIEEQEEDKEFRKISLAEYHRLQNWETENHDQDPKIAIVYLEG----SIVNGRGTWENIGGDRYGELLRTIRQDDDIKAVVLRINSPGGSASAADIIWREV 382          
BLAST of EY662324 vs. ExPASy Swiss-Prot
Match: SPPA_HAEIN (Protease 4 OS=Haemophilus influenzae GN=sppA PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 59/256 (23.05%), Postives = 114/256 (44.53%), Query Frame = 3
Query:   69 FKKSGNFIIGYVPVCGEKEYYLACACEELYAPPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLDNIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERLK--------EEGFITNILYDDEVISMLKERLGVQKDKNLPMVDYRKYSGVRRWTLGLTGGGDQIAVIRASGXXXXXXXXXXXXXXXXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWKE 812
            FK +G  +I Y     + +YYLA   +E+Y        ++GL+ +  +   +L+K+ + P + R+G YKSA +   R  MS E    +   L  ++ N++  VS  +  +K+ I       + +++ LK        + G +T+++   ++   L    G   D    ++++  Y       L      ++IAV+   G                  + +   +RK  +    KA I+R++SPGG A AS+++ +E
Sbjct:  133 FKDAGKPVIAYADNYSQGQYYLASFADEIYLNSIGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRILPNAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLSALFGKGSDGKANLIEFDDYLTQLPDRLEHYNVPNKIAVVNVEG----TIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEIIRQE 384          
BLAST of EY662324 vs. ExPASy Swiss-Prot
Match: SPPA_ECOLI (Protease 4 OS=Escherichia coli (strain K12) GN=sppA PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.429e-11
Identity = 60/268 (22.39%), Postives = 108/268 (40.30%), Query Frame = 3
Query:   39 VEEIRRHVVDFKKSGNFIIGYVPVCGEKEYYLACACEELYAPPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLDNIYGNWLDKVSSTKGKRKEDI--------ERFINDGVYKVERLKEEGFITNILYDDEVISMLKERLGVQK-DKNLPMVDYRKYSGVRRWTLGLTGGGDQIAVIRASGXXXXXXXXXXXXXXXXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWKEI 815
            ++ I + + +F+ SG  +        + +YYLA    +++  P     L+G      +   +L+K+ +   V R+G YKSA +   R  MS    E  +  +  ++ N+L+ V++ +    E +        E     G    +   E   +  +    E+   L +  G  K DKN   + Y  Y+            GD I V+ A+G                   Q    IR  R   + KA ++R++SPGG   AS+++  E+
Sbjct:  131 MQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYA-----LKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQ----IRDARLDPKVKAIVLRVNSPGGSVTASEVIRAEL 389          
The following BLAST results are available for this feature:
BLAST of EY662324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SPPA_SYNY32.125e-2326.28Protease 4 homolog OS=Synechocystis sp. (strain PC... [more]
SPPA_HAEIN1.631e-1523.05Protease 4 OS=Haemophilus influenzae GN=sppA PE=1 ... [more]
SPPA_ECOLI1.429e-1122.39Protease 4 OS=Escherichia coli (strain K12) GN=spp... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662324 ID=EY662324; Name=EY662324; organism=Citrus sinensis; type=EST; length=873bp
TAGACCCACGCGTCCGCTTAAGCCTTCCATGGGGAAAAGTTGAAGAAATT
CGGAGGCATGTTGTAGACTTCAAGAAATCTGGTAACTTTATTATTGGCTA
TGTTCCTGTATGTGGAGAAAAAGAGTATTACCTTGCCTGTGCCTGTGAAG
AGCTATACGCCCCTCCAAGTGCTTACTTTTCTTTGTATGGTTTGACCGTT
CAAGCATCATTCCTTGGAGGTGTTTTGGAGAAGGTGGGAATAGAACCACA
AGTTCAAAGGATTGGTAAATACAAAAGTGCTGGTGATCAACTTACCCGCA
AAACTATGTCCGAAGAAAACTGTGAGATGCTTACTGCATTGCTAGATAAT
ATTTATGGGAATTGGCTGGATAAAGTTTCTTCCACAAAAGGAAAGAGAAA
AGAAGATATTGAGAGATTCATTAATGATGGAGTCTACAAAGTAGAGAGGT
TGAAAGAAGAGGGCTTCATAACAAACATACTCTATGATGATGAGGTTATT
TCAATGTTGAAGGAGAGACTTGGAGTCCAAAAGGATAAAAACCTTCCTAT
GGTTGATTATAGGAAATACTCAGGGGTCAGAAGATGGACCCTTGGTTTAA
CAGGTGGGGGAGATCAAATTGCTGTGATCAGAGCCTCAGGGAGCATTAGT
CGTGTACGGAGTCCATTGAGTCTGTCTAGTTCGGGTATCATCGGAGAGCA
ATTGATAGAGAAAATTCGTAAAGTGAGAGAGTCCAAAAGATATAAGGCTG
CTATCATTCGAATTGACAGCCCTGGAGGTGATGCTCTTGCTTCTGATTTA
ATGTGGAAGGAAATCANACTCTTGTCTGAATCTAACCTGTCATTGCTTTC
ATGTCTGATGTAGCAGCAAGTGG
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