EY662322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY662322 vs. ExPASy Swiss-Prot
Match: BRE1B_ARATH (E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana GN=HUB2 PE=1 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 4.781e-68 Identity = 82/178 (46.07%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 4 GLPAGGGSNVLQKLDSENQT*DSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHXXXXXXXXXXXXXXSRRKLVSLKMQK 537 G+ AG L LD ++ +P ++ FLCRLLQV+S+++S D +++ VEEALA RHSS ELM E ID Q+ K +SI+++ H S EDA IQLS I+D+MKEE+KNL E+++ +H++HKE+++QI+ YISSHS DQ+E++H +RRKL++LKMQK Sbjct: 122 GVRAGANQEALNYLDIVDKK--RVPPCAADETFLCRLLQVDSLDTSKSDEVVRKVEEALALRHSSTMELMGLFENTIDTQKTKAESISQSLHAVKSTEDATIQLSSINDLMKEESKNLREMIDALHVRHKEHSEQIQAYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQK 297 HSP 2 Score: 118.242 bits (295), Expect = 4.781e-68 Identity = 59/119 (49.58%), Postives = 89/119 (74.79%), Query Frame = 3 Query: 525 KDAKDIASGTHSLVPAAAMVNGSVSPEKRPADGRMDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNELNDDKYVHSSRLYNLVNDPLQHWNVEVERYKALTDSLLIDK 881 K KD A H PA A NGS+SPEK P D + L+ELKDS++E KI+A RLSE++ +Q+ N++LS+Q ++++NEL DD+Y++SSRLY+L+ND + HWN E++RYK LT+++ ++ Sbjct: 294 KMQKDAACEGHVTSPAIA--NGSLSPEK-PVD-KTKLRELKDSIDEIKIMAEGRLSELQASQEYNLSLSRQCQDIENELKDDQYIYSSRLYSLINDRIHHWNAELDRYKILTEAIQAER 408
BLAST of EY662322 vs. ExPASy Swiss-Prot
Match: BRE1B_ORYSJ (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. japonica GN=BRE1B PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.651e-46 Identity = 61/177 (34.46%), Postives = 102/177 (57.63%), Query Frame = 1 Query: 4 GLPAGGGSNVLQKLDSENQT*DSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHXXXXXXXXXXXXXXSRRKLVSLKMQ 534 G+ AGG N LQ LD E + +S+ S P E++FL RLL + ++ + + VEEALA R+S+ LMK ++E Q+ +++S++ A + + S+ED I+ L +D +KE NL + + II+ KH++Y D+IE + ++ S + E++ SRRKL L++Q Sbjct: 63 GVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLLNSRNFRNNDDSSLSKLVEEALALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNLRQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGELEESMAELEESRRKLAVLQLQ 239 HSP 2 Score: 99.7525 bits (247), Expect = 1.651e-46 Identity = 54/116 (46.55%), Postives = 82/116 (70.69%), Query Frame = 3 Query: 540 IASGTHSLVPAAAM--VNGSVSPEKRPADGRMDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNELNDDKYVHSSRLYNLVNDPLQHWNVEVERYKALTDSLLIDK 881 + +G SL+ +A VNGSVS +K +D M ++LKD+VEEAK LAA+RL E+ E Q+DN+ LSKQLE++Q++L D+ Y+ +S+ Y +++D L H N E+ERY+ L + L +K Sbjct: 238 LQTGGGSLMNTSAPNGVNGSVSTDKS-SDKGMGWRDLKDAVEEAKTLAANRLFELHETQEDNLILSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEK 352
BLAST of EY662322 vs. ExPASy Swiss-Prot
Match: BRE1B_ORYSI (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica GN=BRE1B PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.651e-46 Identity = 61/177 (34.46%), Postives = 102/177 (57.63%), Query Frame = 1 Query: 4 GLPAGGGSNVLQKLDSENQT*DSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHXXXXXXXXXXXXXXSRRKLVSLKMQ 534 G+ AGG N LQ LD E + +S+ S P E++FL RLL + ++ + + VEEALA R+S+ LMK ++E Q+ +++S++ A + + S+ED I+ L +D +KE NL + + II+ KH++Y D+IE + ++ S + E++ SRRKL L++Q Sbjct: 63 GVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLLNSRNFRNNDDSSLSKLVEEALALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNLRQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGELEESMAELEESRRKLAVLQLQ 239 HSP 2 Score: 99.7525 bits (247), Expect = 1.651e-46 Identity = 54/116 (46.55%), Postives = 82/116 (70.69%), Query Frame = 3 Query: 540 IASGTHSLVPAAAM--VNGSVSPEKRPADGRMDLQELKDSVEEAKILAADRLSEVEEAQQDNINLSKQLENLQNELNDDKYVHSSRLYNLVNDPLQHWNVEVERYKALTDSLLIDK 881 + +G SL+ +A VNGSVS +K +D M ++LKD+VEEAK LAA+RL E+ E Q+DN+ LSKQLE++Q++L D+ Y+ +S+ Y +++D L H N E+ERY+ L + L +K Sbjct: 238 LQTGGGSLMNTSAPNGVNGSVSTDKS-SDKGMGWRDLKDAVEEAKTLAANRLFELHETQEDNLILSKQLEDIQDQLKDENYIVTSKPYTILSDQLHHLNAEIERYRGLVEVLQNEK 352 The following BLAST results are available for this feature:
BLAST of EY662322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY662322 ID=EY662322; Name=EY662322; organism=Citrus sinensis; type=EST; length=881bpback to top |