EY662289

Overview
NameEY662289
Unique NameEY662289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY662289 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 2.178e-90
Identity = 155/207 (74.88%), Postives = 177/207 (85.51%), Query Frame = 3
Query:   45 PANGSDAGSKPLMFPLYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPFPL 665
            P NG       L F +YG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KPTHVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+  L+++N+ATGCIFEYD+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV+IPNSMT+LDELLP  +
Sbjct:  372 PKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISI 578          

HSP 2 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 2
Query:  554 IRFIQSSQLHHKDHSI*KGSQHSKLNDY------LG*ASSISIEMAKRNLTGIWNFTNPGVVSHNEILENYRQYIDPNSTW 778
            +R   SS L++  + I K S+++K+ D       L     ISIEMAKRNL GIWNFTNPGVVSHNEILE Y+ YI+P   W
Sbjct:  536 VRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKW 616          
BLAST of EY662289 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 6.336e-90
Identity = 154/204 (75.49%), Postives = 176/204 (86.27%), Query Frame = 3
Query:   54 GSDAGSKPLMFPLYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPFPL 665
            G     + L F +YG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KP+HVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+  L+++N+ATGCIFEYD+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NPRNFITKI+RY KVVNIPNSMTILDELLP  +
Sbjct:  372 GCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISI 575          

HSP 2 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 2
Query:  554 IRFIQSSQLHHKDHSI*KGSQHSKLNDY------LG*ASSISIEMAKRNLTGIWNFTNPGVVSHNEILENYRQYIDPNSTW 778
            +R   SS L++  + I K S+++K+ +       L     ISIEMAKRNL GIWNFTNPGVVSHNEILE Y+ YI+P+  W
Sbjct:  533 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKW 613          
BLAST of EY662289 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.412e-89
Identity = 154/196 (78.57%), Postives = 173/196 (88.27%), Query Frame = 3
Query:   78 LMFPLYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPFPL 665
            L F +YG+TGWIGGLLGK+C  Q I + YG GRLE+R+SL  DI +VKPTHVFN+AGVTGRPNVDWCESHK ETIR NV GTLTLADVCR+ GL+++N+ATGCIFEYD  HP GSGIGFKEEDTPNF GSFYSKTKAMVEELLK ++NVCTLRVRMPISSDL+NPRNFITKI+RY KVVNIPNSMT+LDELLP  +
Sbjct:  385 LKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISI 580          

HSP 2 Score: 75.8702 bits (185), Expect = 1.061e-13
Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 2
Query:  554 IRFIQSSQLHHKDHSI*KGSQHSKLNDY------LG*ASSISIEMAKRNLTGIWNFTNPGVVSHNEILENYRQYIDPNSTW 778
            +R   SS L++  + I K S+++K+ +       L     ISIEMAKRNL GIWNFTNPGVVSHNEILE YR YI+P   W
Sbjct:  538 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKW 618          

HSP 3 Score: 21.9422 bits (45), Expect = 1.061e-13
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1
Query:  763 PQLHLENFTLEEQA 804
            P+    NFTLEEQA
Sbjct:  614 PEFKWANFTLEEQA 627          
BLAST of EY662289 vs. ExPASy Swiss-Prot
Match: YL780_MIMIV (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L780 PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.373e-40
Identity = 74/195 (37.95%), Postives = 111/195 (56.92%), Query Frame = 3
Query:   90 LYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPN---VDWCESHK--VETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFEN-VCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLP 656
            ++G  GWIG ++ K+ + Q         R ++ +++E +I+ +KP  V +  G T  P    +D+ E     VE ++ N+ G L LA +C+   + L    TGCIFE  +        GF E D PNF GS YS  K   + L+  F+N V  LR+RMPI+ +  NPR+FITKI  Y ++ +IPNSMTILD+++P
Sbjct:    5 IFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTHGPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFEGQNNFSADEK-GFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILSYSRICSIPNSMTILDQMIP 197          

HSP 2 Score: 52.7582 bits (125), Expect = 3.373e-40
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 2
Query:  656 ISIEMAKRNLTGIWNFTNPGVVSHNEILENYRQYIDPNSTWK 781
            + I+MA+   TG +NFTNPG+VSHNEIL   R    PN TW+
Sbjct:  198 VMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPNLTWE 239          

HSP 3 Score: 20.7866 bits (42), Expect = 3.373e-40
Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 1
Query:  754 VHRPQLHLENFTLEEQ 801
            +H+P L  EN + E+Q
Sbjct:  231 IHKPNLTWENMSREQQ 246          
The following BLAST results are available for this feature:
BLAST of EY662289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
RHM2_ARATH2.178e-9074.88Probable rhamnose biosynthetic enzyme 2 OS=Arabido... [more]
RHM3_ARATH6.336e-9075.49Probable rhamnose biosynthetic enzyme 3 OS=Arabido... [more]
RHM1_ARATH1.412e-8978.57Probable rhamnose biosynthetic enzyme 1 OS=Arabido... [more]
YL780_MIMIV3.373e-4037.95Uncharacterized protein L780 OS=Acanthamoeba polyp... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662289 ID=EY662289; Name=EY662289; organism=Citrus sinensis; type=EST; length=916bp
TCCAAAACCCACGCGTCCGTTCACTCCTGTCTCCAATGGGTTTCCCAGCC
AACGGCTCCGACGCCGGCTCCAAGCCGCTCATGTTTCCCCTCTACGGCCG
CACTGGCTGGATCGGGGGCTTGCTCGGCAAGCTCTGCCAAGCTCAGTCCA
TTGACTTCACCTACGGCTCCGGCCGCCTCGAGAACCGCGCCTCCCTCGAA
GCCGACATCGCCGCCGTCAAGCCCACCCACGTCTTCAACGCGGCCGGGGT
GACCGGTAGGCCCAACGTCGACTGGTGCGAATCGCATAAGGTCGAGACCA
TACGGACTAATGTCGTCGGCACCCTTACGCTTGCTGACGTCTGCAGAGAC
AAAGGTTTGATTCTCATTAATTACGCCACCGGCTGCATCTTCGAGTACGA
TTCCGGTCACCCCCTCGGATCCGGCATCGGCTTCAAGGAGGAGGATACTC
CGAATTTTGTCGGATCTTTCTACTCCAAGACTAAGGCCATGGTGGAAGAG
TTGCTCAAGAATTTTGAGAATGTCTGTACTTTGCGTGTCAGGATGCCGAT
CTCATCAGATTTATCCAATCCTCGCAACTTCATCACAAAGATCACTCGAT
ATGAAAAGGTAGTCAACATTCCAAACTCAATGACTATCTTGGATGAGCTT
CTTCCATTTCCATTGAGATGGCAAAGAGAAACCTCACTGGAATTTGGAAC
TTTACGAACCCCGGTGTGGTGAGCCACAATGAGATTCTGGAGAATTATCG
GCAGTACATAGACCCCAACTCCACTTGGAAAATTTTACCTTGGAAGAGCA
GGCAAGTGATTGTTGCCCAAGGAGCACACCGAGCTTGTGCCCGTAAATGA
AAACGGATTCCCTGACTCTTGCCCTTAAGGATCCCTCCTAATATGGTTTG
AGCCAACAAAAAAACA
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