EY744217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_JASNU (50S ribosomal protein L16, chloroplastic OS=Jasminum nudiflorum GN=rpl16 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.127e-12 Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEKTPPGQSRRKPKGA 785 +P + F +H+G+M G +SRGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K +S GA Sbjct: 3 SPKKTRFRKQHRGRMKGISSRGNYICFGRYALQALE-PAWITSRQIEAGRRAMTRNVR-RGGKIWVRIFPDKPVTARSTEARMGA 85
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_CUSRE (50S ribosomal protein L16, plastid OS=Cuscuta reflexa GN=rpl16 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.471e-12 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+GKM G + RGN ICFG+YALQ L P QIE G +AM RK + RG KFWVRIFP+K Sbjct: 3 SPKRTRFRKQHRGKMKGISYRGNHICFGKYALQALE-PAWITSRQIEAGRRAMTRKAR-RGGKFWVRIFPDK 72
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_SACOF (50S ribosomal protein L16, chloroplastic OS=Saccharum officinarum GN=rpl16 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+G+M GK+ RGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K Sbjct: 3 SPKRTRFRKQHRGRMNGKSCRGNHICFGRYALQVLE-PAWITARQIEAGRRAMTRYAR-RGGKIWVRIFPDK 72
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_SACHY (50S ribosomal protein L16, chloroplastic OS=Saccharum hybrid GN=rpl16 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+G+M GK+ RGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K Sbjct: 3 SPKRTRFRKQHRGRMNGKSCRGNHICFGRYALQVLE-PAWITARQIEAGRRAMTRYAR-RGGKIWVRIFPDK 72
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_ORYSJ (50S ribosomal protein L16, chloroplastic OS=Oryza sativa subsp. japonica GN=rpl16 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+G+M GK+ RGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K Sbjct: 3 SPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALE-PTWITARQIEAGRRAMTRYAR-RGGKIWVRIFPDK 72
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_ORYSI (50S ribosomal protein L16, chloroplastic OS=Oryza sativa subsp. indica GN=rpl16 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+G+M GK+ RGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K Sbjct: 3 SPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALE-PTWITARQIEAGRRAMTRYAR-RGGKIWVRIFPDK 72
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_ORYSA (50S ribosomal protein L16, chloroplastic OS=Oryza sativa GN=rpl16 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+G+M GK+ RGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K Sbjct: 3 SPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALE-PTWITARQIEAGRRAMTRYAR-RGGKIWVRIFPDK 72
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_ORYNI (50S ribosomal protein L16, chloroplastic OS=Oryza nivara GN=rpl16 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+G+M GK+ RGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K Sbjct: 3 SPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALE-PTWITARQIEAGRRAMTRYAR-RGGKIWVRIFPDK 72
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_SORBI (50S ribosomal protein L16, chloroplastic OS=Sorghum bicolor GN=rpl16 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.281e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+G+M GK+ RGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K Sbjct: 3 SPKRTRFRKQHRGRMKGKSCRGNHICFGRYALQVLE-PAWITARQIEAGRRAMTRYAR-RGGKIWVRIFPDK 72
BLAST of EY744217 vs. ExPASy Swiss-Prot
Match: RK16_MAIZE (50S ribosomal protein L16, chloroplastic OS=Zea mays GN=rpl16 PE=3 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 4.281e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 531 APNE*SFPNKHKGKMTGKASRGNLICFGRYALQTLRTPLGSKPEQIETGPQAMVRKGKPRGEKFWVRIFPEK 746 +P F +H+G+M GK+ RGN ICFGRYALQ L P QIE G +AM R + RG K WVRIFP+K Sbjct: 3 SPKRTRFRKQHRGRMKGKSCRGNHICFGRYALQVLE-PAWITARQIEAGRRAMTRYAR-RGGKIWVRIFPDK 72 The following BLAST results are available for this feature:
BLAST of EY744217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744217 ID=EY744217; Name=EY744217; organism=Citrus sinensis; type=EST; length=951bpback to top |