EY744208

Overview
NameEY744208
Unique NameEY744208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 6.782e-96
Identity = 175/213 (82.16%), Postives = 191/213 (89.67%), Query Frame = 3
Query:   78 MVLSKTFSESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILGSS 716
            MVLSKT S+SD SIHSTFASRY+R SLPRF MP+NSIPKEAAYQI+NDELMLDGNPRLNLASFVTTWMEPE DKLMM +IN+NYVDMDEYPVTT+L+NRCVN++  + NAPLED ETAV VGTVGSSEAIMLAGLAFK KW NK KA+GKP DKP+IVTGANVQVCWEKFARYFE ELKEVKLSEGYYV DP KA ++ DE TI VAAILGS+
Sbjct:    1 MVLSKTVSQSDVSIHSTFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGETAVGVGTVGSSEAIMLAGLAFKRKWQNKMKAQGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPEKAVEMVDENTICVAAILGST 213          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2)

HSP 1 Score: 348.206 bits (892), Expect = 3.366e-95
Identity = 173/213 (81.22%), Postives = 191/213 (89.67%), Query Frame = 3
Query:   78 MVLSKTFSESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILGSS 716
            MVLS   SESD S+HSTFASRY+R SLPRF MPENSIPKEAAYQI+NDELMLDGNPRLNLASFVTTWMEPE DKL+M++IN+NYVDMDEYPVTT+L+NRCVN++  + NAPLE++ETAV VGTVGSSEAIMLAGLAFK KW NKRKAEGKP DKP+IVTGANVQVCWEKFARYFE ELKEVKLSEGYYV DP +A  + DE TI VAAILGS+
Sbjct:    1 MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGST 213          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 2.214e-90
Identity = 162/214 (75.70%), Postives = 189/214 (88.32%), Query Frame = 3
Query:   78 MVLSKT-FSESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILGSS 716
            MVL+ T   +S+ES+H TFASRY++  LP+F MP+ S+PKEAAYQI+NDELMLDGNPRLNLASFV+TWMEPE DKL+M++IN+NYVDMDEYPVTT+L+NRCVN++  + +AP+ D ETAV VGTVGSSEAIMLAGLAFK KW +KRKAEGKPFDKP+IVTGANVQVCWEKFARYFE ELKEVKL EGYYV DPAKA ++ DE TI VAAILGS+
Sbjct:    1 MVLTTTSIRDSEESLHCTFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAVGVGTVGSSEAIMLAGLAFKRKWQSKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLKEGYYVMDPAKAVEIVDENTICVAAILGST 214          

HSP 2 Score: 25.409 bits (54), Expect = 2.214e-90
Identity = 14/32 (43.75%), Postives = 17/32 (53.12%), Query Frame = 1
Query:  748 LKNFLTKKKRERGGESSIFFLRFVGGGVIGPF 843
            L   LTKK +E G E+ I  +    GG I PF
Sbjct:  225 LNELLTKKNKETGWETPIH-VDAASGGFIAPF 255          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.239e-89
Identity = 164/213 (77.00%), Postives = 189/213 (88.73%), Query Frame = 3
Query:   78 MVLSKTFSESDESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILGSS 716
            MVL+KT + +DES+ + F SRY+R +LP++ + ENSIPK+AAYQI+ DELMLDGNPRLNLASFVTTWMEPE DKL+M +IN+NYVDMDEYPVTT+L+NRCVNI+ R+ NAPLE+SETAV VGTVGSSEAIMLAGLAFK KW NKRKAEGKP+DKP+IVTGANVQVCWEKFARYFE ELKEV LSEGYYV DP KA ++ DE TI VAAILGS+
Sbjct:    1 MVLTKT-ATNDESVCTMFGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLSEGYYVMDPDKAAEMVDENTICVAAILGST 212          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.621e-39
Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            E + S F ++ I         P + +  + A+QI+NDEL LDGN R NLA+F  TW +    KLM  +IN+N++D +EYP +  +  RCVN++  + +AP   +  AV   T+GSSEA ML G+A K +W  + +A GKP DKP++V G  VQ+CW KFARY++ EL+E+ +  G    DP +  +  DE TI V    G
Sbjct:   12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFG 210          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.621e-39
Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            E + S F ++ I         P + +  + A+QI+NDEL LDGN R NLA+F  TW +    KLM  +IN+N++D +EYP +  +  RCVN++  + +AP   +  AV   T+GSSEA ML G+A K +W  + +A GKP DKP++V G  VQ+CW KFARY++ EL+E+ +  G    DP +  +  DE TI V    G
Sbjct:   12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFG 210          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.621e-39
Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            E + S F ++ I         P + +  + A+QI+NDEL LDGN R NLA+F  TW +    KLM  +IN+N++D +EYP +  +  RCVN++  + +AP   +  AV   T+GSSEA ML G+A K +W  + +A GKP DKP++V G  VQ+CW KFARY++ EL+E+ +  G    DP +  +  DE TI V    G
Sbjct:   12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFG 210          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.621e-39
Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            E + S F ++ I         P + +  + A+QI+NDEL LDGN R NLA+F  TW +    KLM  +IN+N++D +EYP +  +  RCVN++  + +AP   +  AV   T+GSSEA ML G+A K +W  + +A GKP DKP++V G  VQ+CW KFARY++ EL+E+ +  G    DP +  +  DE TI V    G
Sbjct:   12 ELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFG 210          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.621e-39
Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            E + S F ++ I         P + +  + A+QI+NDEL LDGN R NLA+F  TW +    KLM  +IN+N++D +EYP +  +  RCVN++  + +AP   +  AV   T+GSSEA ML G+A K +W  + +A GKP DKP++V G  VQ+CW KFARY++ EL+E+ +  G    DP +  +  DE TI V    G
Sbjct:   12 ELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFG 210          
BLAST of EY744208 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.621e-39
Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:  111 ESIHSTFASRYIRNSLPRFTMPENSIPKEAAYQIMNDELMLDGNPRLNLASFVTTWMEPEGDKLMMAAINENYVDMDEYPVTTKLRNRCVNIMPRVVNAPLEDSETAVRVGTVGSSEAIMLAGLAFKGKWPNKRKAEGKPFDKPSIVTGANVQVCWEKFARYFEGELKEVKLSEGYYVEDPAKAGQVGDEKTIWVAAILG 710
            E + S F ++ I         P + +  + A+QI+NDEL LDGN R NLA+F  TW +    KLM  +IN+N++D +EYP +  +  RCVN++  + +AP   +  AV   T+GSSEA ML G+A K +W  + +A GKP DKP++V G  VQ+CW KFARY++ EL+E+ +  G    DP +  +  DE TI V    G
Sbjct:   12 ELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFG 210          
The following BLAST results are available for this feature:
BLAST of EY744208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
DCE_PETHY6.782e-9682.16Glutamate decarboxylase OS=Petunia hybrida GN=GAD ... [more]
DCE1_ARATH3.366e-9581.22Glutamate decarboxylase 1 OS=Arabidopsis thaliana ... [more]
DCE_SOLLC2.214e-9075.70Glutamate decarboxylase OS=Solanum lycopersicum PE... [more]
DCE2_ARATH1.239e-8977.00Glutamate decarboxylase 2 OS=Arabidopsis thaliana ... [more]
DCEB_SHIFL7.621e-3941.50Glutamate decarboxylase beta OS=Shigella flexneri ... [more]
DCEB_ECOLI7.621e-3941.50Glutamate decarboxylase beta OS=Escherichia coli (... [more]
DCEB_ECO577.621e-3941.50Glutamate decarboxylase beta OS=Escherichia coli O... [more]
DCEA_SHIFL7.621e-3941.50Glutamate decarboxylase alpha OS=Shigella flexneri... [more]
DCEA_ECOLI7.621e-3941.50Glutamate decarboxylase alpha OS=Escherichia coli ... [more]
DCEA_ECOL67.621e-3941.50Glutamate decarboxylase alpha OS=Escherichia coli ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744208 ID=EY744208; Name=EY744208; organism=Citrus sinensis; type=EST; length=847bp
TAGCTCTCTGTACTCTCTCTGACACCAAAAGAAAAAAAAAATCATTATTA
AATTTTGTTTGTTTTAATCTTTCAATCATGGTTCTTTCGAAGACATTTTC
CGAATCCGATGAGTCAATTCACTCCACCTTTGCCTCTCGCTACATCCGAA
ACTCTCTTCCTCGGTTCACGATGCCGGAGAACTCGATACCGAAGGAGGCG
GCGTACCAGATCATGAACGACGAGCTGATGCTCGACGGGAATCCAAGATT
GAACTTGGCTTCCTTCGTCACAACGTGGATGGAGCCTGAGGGTGACAAGC
TTATGATGGCTGCCATTAACGAGAACTACGTTGACATGGATGAGTATCCT
GTCACCACCAAGCTTCGCAATCGATGTGTGAACATTATGCCCCGAGTGGT
GAATGCTCCACTGGAGGACTCCGAGACGGCTGTCAGAGTTGGAACCGTAG
GATCATCGGAAGCCATAATGTTGGCCGGCCTTGCATTCAAAGGAAAGTGG
CCGAACAAGCGCAAGGCTGAAGGAAAGCCCTTTGACAAACCCAGCATTGT
CACTGGAGCGAACGTTCAGGTCTGCTGGGAGAAATTTGCGAGGTATTTTG
AGGGGGAGTTGAAGGAAGTGAAGCTGTCGGAAGGCTACTACGTGGAGGAC
CCCGCCAAAGCTGGACAAGTGGGGGATGAAAAAACAATCTGGGTAGCGGC
AATTCTGGGTTCTTCCCTCAAGGGGAAATTGAAAAAGGTCAAGCCCTTTA
AAAAACTTTTTGACAAAAAAAAAAAGGGAAAGGGGGGGGGAAAGCTCCAT
TTTTTTTTTGAGGTTTGTGGGGGGGGGGGTCATTGGACCATTTTTTT
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