EY744201

Overview
NameEY744201
Unique NameEY744201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744201 vs. ExPASy Swiss-Prot
Match: SFRS7_MOUSE (Splicing factor, arginine/serine-rich 7 OS=Mus musculus GN=Sfrs7 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.264e-11
Identity = 42/107 (39.25%), Postives = 52/107 (48.60%), Query Frame = 1
Query:    1 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFXXXXXXXXXXXXXXGK----NGWRVELSHNSKXXXXXXXXXXXXXEDL--KCYECGEPGHFAREC 303
            VYVGNL     + +LE  F  +G LR+VW+AR PPG+AFVEF              GK    +  RVELS                  D   +CYECGE GH+A +C
Sbjct:   42 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 148          
BLAST of EY744201 vs. ExPASy Swiss-Prot
Match: SFRS7_HUMAN (Splicing factor, arginine/serine-rich 7 OS=Homo sapiens GN=SFRS7 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.264e-11
Identity = 42/107 (39.25%), Postives = 52/107 (48.60%), Query Frame = 1
Query:    1 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFXXXXXXXXXXXXXXGK----NGWRVELSHNSKXXXXXXXXXXXXXEDL--KCYECGEPGHFAREC 303
            VYVGNL     + +LE  F  +G LR+VW+AR PPG+AFVEF              GK    +  RVELS                  D   +CYECGE GH+A +C
Sbjct:   13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119          
BLAST of EY744201 vs. ExPASy Swiss-Prot
Match: SFRS7_BOVIN (Splicing factor, arginine/serine-rich 7 OS=Bos taurus GN=SFRS7 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.264e-11
Identity = 42/107 (39.25%), Postives = 52/107 (48.60%), Query Frame = 1
Query:    1 VYVGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFVEFXXXXXXXXXXXXXXGK----NGWRVELSHNSKXXXXXXXXXXXXXEDL--KCYECGEPGHFAREC 303
            VYVGNL     + +LE  F  +G LR+VW+AR PPG+AFVEF              GK    +  RVELS                  D   +CYECGE GH+A +C
Sbjct:   13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119          
The following BLAST results are available for this feature:
BLAST of EY744201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SFRS7_MOUSE1.264e-1139.25Splicing factor, arginine/serine-rich 7 OS=Mus mus... [more]
SFRS7_HUMAN1.264e-1139.25Splicing factor, arginine/serine-rich 7 OS=Homo sa... [more]
SFRS7_BOVIN1.264e-1139.25Splicing factor, arginine/serine-rich 7 OS=Bos tau... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744201 ID=EY744201; Name=EY744201; organism=Citrus sinensis; type=EST; length=959bp
GTTTATGTTGGGAATTTGGATCCTCGGGTATCTGAAAGGGATCTTGAAGA
TGAGTTTCGCATGTTTGGCGTGCTTCGCAGTGTGTGGGTTGCTCGAAGGC
CCCCGGGGTATGCCTTTGTTGAGTTTGATGATCGCAGGGATGCTGTAGAT
GCTATTCGTGCACTAGATGGGAAAAATGGCTGGCGTGTGGAGCTTTCTCA
TAACTCTAAGGGTGGTGGAGGCCGTGGTGGGCGTGGGCGTGGTGGAGGTG
AGGACTTGAAGTGTTATGAGTGTGGTGAGCCTGGTCACTTTGCTCGTGAA
TGTCGCTTGCGCATTGGTTCACGTGGCTTGGGGAGTGGACGACGTCGTAG
CCCTAGCCCACGTCGACGTAGAAGTCCAAGTTATGGGTATGGACGCAGGA
GCTATAGCCCCCGTGGAAGACGATCTCCTCCTCCACGTCGCCGCAGCATG
TCACCTCGACGTGGTCGCAGTTACAGCAGGTCACCCCCACATCGCCATTC
TCGTCGTGGTTCACCTTATGCTAATGGGGACTAAGGCTGTAACCTCAACT
GAAGCAAATGTGTAATGGATTGGAGCACATGTTGGCAGTATTGTAGTCGT
TATAGGATCATTTGACGAAAGAAGATTTATATTAGTTTTGTTCATGTCAT
GACTTTGAAATTTGATAGTACCTTGGTTTTGGAAGGGCTTCGGCAAATTG
TTTCGGGTGTGAAAAGGGTGCTATGGACACCTTTTTGGGTCTTTCTTCAA
ACTTGGAGGGTTGTTTCCCTCTTTTAAATTCCTTCCTTCTGGGGGGTTTT
AATGGTTCCTAAGTTCCCCTTAATAAACGGCCATTTTGTTGTTCCCTTTG
AAATTTAAATTTTTCTAAAAAATTTTTTAATTGTTTTGTTTTTTGGGGGG
GGGGAATTTTTTTGGGGCTAAAAAAGGGGGCTTCTTTTTTTTTCCCCCCC
CTTTTTTTT
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