EY744197

Overview
NameEY744197
Unique NameEY744197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  303 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            ++   + +EF++ + K K+     I  FTA+WCGPC+FI PV  E + K P     K+D+D+  L+    K N+ A+PTFLF + G +  ++VGA    L+ T+
Sbjct:    8 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDE--LKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTI 109          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  303 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            ++   + +EF++ + K K+     I  FTA+WCGPC+FI PV  E + K P     K+D+D+  L+    K N+ A+PTFLF + G +  ++VGA    L+ T+
Sbjct:    8 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDE--LKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTI 109          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.907e-15
Identity = 36/97 (37.11%), Postives = 63/97 (64.95%), Query Frame = 3
Query:  324 EEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            EE+N    K  +     +  FTA+WCGPC+FI P++ +++ K PHV   K+D+D+  L++  ++ ++ A+PTF+F + GK+V  +VGA+   L+ T+
Sbjct:   21 EEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDE--LKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTI 115          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 3
Query:  297 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRL 602
            + ++   + +E+N    K KD     +  FTA+WCGPC+ I P + EL+ K PHV  +K+D+D   L+    +  + A+P+F+  + G++V  IVGA    L
Sbjct:    5 AQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDD--LKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDEL 104          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.005e-14
Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 3
Query:  303 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            ++ + + + +N  L K  DD    +  FTA+WCGPCKFI     EL+ K P VT  K+D+D+  L+S  +   + A+PTF+F + GK V ++VGA+   L+ T+
Sbjct:    7 VIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDE--LKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTI 108          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.924e-14
Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  303 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            ++   + E +N  L K  +     +  FTA+WCGPC+FI P   +L+ K P+V   K+D D+  L+S  S   I A+PTF+F + GK + ++VGA+   L++T+
Sbjct:    8 VIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDE--LKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.742e-14
Identity = 37/97 (38.14%), Postives = 61/97 (62.89%), Query Frame = 3
Query:  324 EEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            E +N  L K  D     +  FTA+WCGPC+FI P + EL+ K P+VT  K+D+D+  L++   +  + ++PTF+F + GK + ++VGA+   L+ T+
Sbjct:   15 EAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDE--LKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTI 109          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRX1_YEAST (Thioredoxin-1 OS=Saccharomyces cerevisiae GN=TRX1 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13
Identity = 37/97 (38.14%), Postives = 62/97 (63.92%), Query Frame = 3
Query:  315 ESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLK 605
            ++  EF+S++ +   D L  + ++ A WCGPCK I P+I + S ++P    YK+D+D+ G      K  +SA+PT L F++GK+VA++VGA  + +K
Sbjct:    6 KTASEFDSAIAQ---DKLVVVDFY-ATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELG--DVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIK 96          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.339e-13
Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 3
Query:  300 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQL 623
            N+    S E + S L +  D        FTA WCGPC+ I PV  ELS K P +   K+D+D+  L     + ++ A+PTF+F + GK V ++VGA+   L+  +  L
Sbjct:    5 NVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDE--LRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVAAL 110          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 31/104 (29.81%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  303 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTM 614
            ++   + E++N+ L   K+ +   +  FTA WC PC+FI P+  EL+ KH  V  +K+D+D+  L +   + ++ A+PTF++ +  +K+ ++VGA    ++  +
Sbjct:   13 VIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDE--LATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKL 114          
The following BLAST results are available for this feature:
BLAST of EY744197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
TRXH_ORYSJ2.081e-1536.54Thioredoxin H-type OS=Oryza sativa subsp. japonica... [more]
TRXH_ORYSI2.081e-1536.54Thioredoxin H-type OS=Oryza sativa subsp. indica G... [more]
TRXH1_TOBAC7.907e-1537.11Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=... [more]
TRXH_FAGES1.349e-1434.31Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV... [more]
TRXH2_TOBAC3.005e-1438.46Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=... [more]
TRXH1_ARATH3.924e-1436.54Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TR... [more]
TRXH_RICCO8.742e-1438.14Thioredoxin H-type OS=Ricinus communis PE=3 SV=1[more]
TRX1_YEAST3.322e-1338.14Thioredoxin-1 OS=Saccharomyces cerevisiae GN=TRX1 ... [more]
TRXH_PICMA4.339e-1336.11Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 S... [more]
TRXH_BRARA3.673e-1229.81Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744197 ID=EY744197; Name=EY744197; organism=Citrus sinensis; type=EST; length=861bp
CGCCCGCAGTGGCACCGCTCCCAAAAACCCTAACGAAGAAGAGAGGTGAA
TTTGCAGAGAAAATGAGAGGAAGTTCTTCAGTTATTTTGCGTCGATTACT
TGTTCGACGCCAAGTCTTAAATCCCAATTCTACTAATATTGCAAAATTAC
TAATTTCGCATTCTACAAACAACACTACTGTTCCCAAGATACCCTCGTTC
CGTAATTATATTCCTGCTAGCTCCTCGCAATCACAGTCACAGATGCTTCC
TTCTCTTCAATTCCACAGAACTCTGTTCTCATCCCCAGATGGTCCATCAA
ATATTCTAGTCATCGAGTCAGGGGAAGAGTTCAATAGCTCACTTGGCAAA
GTTAAAGATGATTCTCTGCCAGCGATATTTTATTTCACTGCTGCTTGGTG
TGGCCCCTGCAAGTTTATATGGCCTGTCATAGGGGAGTTGAGTGCAAAAC
ACCCTCATGTAACAACATATAAGATTGACATTGACCAGAAAGGACTTGAA
AGCACATTAAGCAAGTTAAACATCAGTGCTGTGCCAACATTCTTGTTCTT
TCAACATGGAAAAAAGGTGGCTGAAATAGTTGGTGCTGAAGTCTCACGGT
TGAAAACAACTATGGAACAACTTTACAAGAAGGATGGAATGAAGTAAGGA
TAACTGGATCAAATGACCTTGAAAAATTTTCAGGAAAAATTTTGGGAAAG
AGGAAGATATTTGGTTTTTGGTGTCAGGGTAAAAAAAAACTTTGGAAAAT
TACGAATCCCTTTTAATTCAAACCCCTTTTTGGAAAGGAAAAATTAAAGG
GTTTTTTTTTTTTTTTTTTTTTTTCCCCTCCCCCGGGAACCTCTAAAATT
TTACGTTCTAA
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