EY661541

Overview
NameEY661541
Unique NameEY661541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_TRIEI (Trigger factor OS=Trichodesmium erythraeum (strain IMS101) GN=tig PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.417e-22
Identity = 66/240 (27.50%), Postives = 126/240 (52.50%), Query Frame = 3
Query:   12 AIVDISATTIDEDESN-VQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQRN 725
            AIVD       E E    Q +P  + + F  D ++G + +PGF++ I G++  ETK     FP  + + +L G    FTV  +EL  ++LP+LDD LA + +    TI++++E L QK  + ++    Q  + AI+D+L   +E++IP++L + + +Q+     + + Q G+ + E       S + + E  E         +K++L +  + KRE++    E++  E +  + +LK+++
Sbjct:  172 AIVDFVGIIPSETEGEEAQEVPGGKAQDFQMDLKEG-QFIPGFIEGIVGMKLQETKEISAQFPSEYSEANLAGKPVVFTVTLKELKEKELPELDDDLAQE-ISEFETIDKLREFLEQKFTKEKEEKTKQNKEKAIIDELVTHLEVEIPETLIKNEVQQMLAQSAMDLSQYGIDVKE-----FFSSEKLPEMQERTRPEAIERLKRDLVIATVAKRESITVDEEEIKAESQKVVKQLKEKD 404          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_CALS8 (Trigger factor OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tig PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.417e-22
Identity = 69/209 (33.01%), Postives = 116/209 (55.50%), Query Frame = 3
Query:  120 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV-EQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQR 722
            + +PGF + + GI++GE K   + FPE ++ + L G +A F V+ +E+  ++LP+LDD  A K +    T+E++K ++  + +E  ++ AKD+  D AIL+++ +  EIDIP+ + E Q        +  +Q      E+ L A+   K  KEF E   E  T  I+ NL +  I K EN+Q + E+L KE+E         + +LK+R
Sbjct:  194 RFIPGFEEQLIGIKKGEEKEIEVVFPEDYQSQELAGKKATFKVKVKEIKVKELPELDDEFA-KDVSEYETLEELKASIRNRIKEKNDKRAKDEMID-AILEKIAQATEIDIPEPMIENQINYYVEDVVRNLQYFGMTYEKYLEAIG--KTDKEFREQFRERATKAIRNNLILEKIAKVENIQATDEELEKELERLAKMYNLEVEKLKER 398          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_NOSP7 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tig PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.039e-20
Identity = 70/257 (27.24%), Postives = 133/257 (51.75%), Query Frame = 3
Query:   12 AIVDIS---ATTIDEDES-NVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQL--AALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDL---VKEVENSIAELKQRNQNLVGIPVEN 755
            A+VD     A    EDE+  ++ IP AE   F  + ++ DK +PGF+  I G+   ET+     FP+ +  E L G  A F V  +EL  ++LP+++D  A + +    T+E+++ +L+++ ++            A+L +L K VE+D+P +L E++         +  Q  M+L++Q L    L +   + +  E         IK++L++ ++ KRE+++ + E++   VKE+     E K+ +++ +   VEN
Sbjct:  172 AVVDFKGSFAKAEGEDETAELEPIPGAEATDFQVELQE-DKFIPGFISGIVGMNPEETREIAAQFPDPYANEDLAGKAATFIVTLKELKEKELPEINDDFAQE-ISDFETLEELRASLVERYQKEADDKTKTNKQEALLTELLKHVEVDLPLTLVEQE------VDAMLTQTAMRLSQQGLDVRKLFTQDIIPQLRERSRTEAIERIKRSLSLREVGKRESIEVTPEEIGVRVKELLEQYPEEKEVDEDRLRSIVEN 420          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_ANATD (Trigger factor OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tig PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.572e-19
Identity = 61/191 (31.94%), Postives = 103/191 (53.93%), Query Frame = 3
Query:  126 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV-EQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 695
            +PGF + + G+ +GE K   + FPE +++  L G +A F V+ +++  ++LP+LDD  A K +    T+E++K  +  + RE  ++ AKD+  D AIL+++ +   IDIP+ + E Q           +Q      E+ L A+   K  KEF     E     ++ NL +  I K EN+Q + E+L KE+E
Sbjct:  196 IPGFEEQLIGMNKGEEKEIEVTFPEDYQEPSLAGKKATFKVKVKDIKVKELPELDDEFA-KDVSEFETLEELKANIRNRIREKNDKRAKDEMID-AILEKIAQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYERYLQAIG--KTDKEFRSQFRERAEKAVRNNLILEKIAKVENIQATEEELQKELE 382          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_SYNJA (Trigger factor OS=Synechococcus sp. (strain JA-3-3Ab) GN=tig PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 63/247 (25.51%), Postives = 121/247 (48.99%), Query Frame = 3
Query:    6 RPAIVDISATTIDEDESNVQNIPDAETKGFHFDTE-DGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQL--LQMQAGMKLNE-QQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQRNQNL 734
            RPA +      ID    + +  P  E     F  E   +  +PGF+  + G+Q  +TK     FP+ + ++ L G    FTV  +E+  ++LP+LDD+   + +    T+ +++E L ++  +      ++  + AIL+ + +  E+D+P++L E++  QL    L  LQ Q G+   E ++  +   P+ + + +E       N +++ LA+  I ++E +     +L  EVE  +A   Q+ Q L
Sbjct:  164 RPAQLG-DVVVIDFQARDAEGNPLEEIAAQDFQLELKEENFIPGFVAGVVGMQLDQTKEITATFPDDYFRKELAGKTVTFTVCLKEIKTKELPELDDAFVQE-ISEFQTVAELREHLQKRLEQDALRQSEENLETAILNAILETTEVDLPETLVEQETTQLLARSLQSLQQQQGVTPGEIRKFLSQLPPETLNQLMERHRPEAINRLRRTLALSAIVRQEQIAVGPNELEVEVEEVMAAYAQQGQKL 408          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_STAHJ (Trigger factor OS=Staphylococcus haemolyticus (strain JCSC1435) GN=tig PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 62/209 (29.67%), Postives = 109/209 (52.15%), Query Frame = 3
Query:   99 FDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLL-----QKCREVEQTAKDQ----ATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVE 695
            +D E G    +PGF D + G++ GE K   + FPE +  E L G +A F  +  E+ Y+++P+LDD +A +L     ++++ KE L      QK  E E   K++    ATDNA +D    M++ ++ + + +E G+++   Q L +Q   +++ Q  + L          E   ++    IK NL +  I  +EN++ + ED+ KE+E
Sbjct:  187 YDLEIGSGSFIPGFEDQLVGVKTGEEKDVVVTFPEEYHAEELAGKKATFKTKVNEIKYKEVPELDDEIANELDSDANSVDEYKENLRKRLSEQKAEEAENVEKEEAINKATDNATIDIPQAMIDTELDR-MVQEFGQRIQ-QQGLDLQTYFQISGQDESQLR---------EQMKDDAEQRIKTNLTLSAIADKENIEANDEDIDKELE 384          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_PROMA (Trigger factor OS=Prochlorococcus marinus GN=tig PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 67/281 (23.84%), Postives = 137/281 (48.75%), Query Frame = 3
Query:   36 TIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFST---EDLVKEVENSIAELKQRNQNLVGIPVENG*KLLQGAKFPMVERTAEIRTYPRELPIIERGLGGRPE 869
            T  +D S ++       +    D E+G +++PGF++ I G++  ETK+    FP+ ++ E  +G +A+F ++ ++L  R+LPKLDD  A K      ++++++  L  + +   +    +    ++L+ L K +E+D+P++L +E+ R L    + Q           + +  +   V   +E+        +K+NLA+  + + EN++  +   E+ +KEV   +A  K  +Q  +   V+N   LLQ   F  +E    I     +  + E+    +P+
Sbjct:  184 TFADDGSEIEG---GSGESMEIDLEEG-RMIPGFIEGIVGMKINETKTIDCQFPKDYQDEKAKGRKAKFDIQLQDLKTRELPKLDDDFA-KQASDKNSLKELRNELTNRLKSDAKNRNKKNRQESLLEALVKELEVDLPKTLIDEEVRNL----IEQTARNFAEQGMDIKSTFTQDLVSSLMESSRPEAEINLKKNLALNALAEAENIKVDSQALEEKIKEVNIELANQKNIDQKKLRQVVQN--DLLQEKLFDWLEANNTILEKKPKKALNEKVKSSKPK 453          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_ANAVT (Trigger factor OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tig PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 61/243 (25.10%), Postives = 124/243 (51.03%), Query Frame = 3
Query:   12 AIVD----ISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQL--AALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQR 722
            A+VD    I+    D++ +  + IP  +   F  + ++ DK +PGF+  I G+  G+TK     FP+ +  + L G  A FTV  +E+  ++LP+L+D  A + +    T+E ++ +L ++ ++  +         A+L +L K +E+D+P++L E++         +  Q  M+L++Q L    L +   + +  E         +K++L + ++ KRE++  + E    E++  + EL Q+
Sbjct:  172 AVVDFKGVIAKAEGDDENAEPEPIPGGDASDFQVELQE-DKFIPGFVTGIVGMNPGDTKEVSAQFPDPYVNQELAGKPAIFTVTLKEIKEKELPELNDDFAQE-VSDFDTLEALRASLAERYQKEAEDKTKNNQQEALLGELVKHIEVDLPETLIEKE------VDAMLTQTAMRLSQQGLDVKKLFTQDIIPQLRERSRPEAVERLKRSLGLQEVAKRESIAVTPE----EIQARVTELVQQ 402          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_SYNJB (Trigger factor OS=Synechococcus sp. GN=tig PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 64/247 (25.91%), Postives = 126/247 (51.01%), Query Frame = 3
Query:    6 RPA-IVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQ--MQAGMKLNE-QQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQRNQNL 734
            RPA + D+        ++    + +  T+ F  + ++ D  +PGF+  I G+Q  ETK     FP+ + ++ L G    F V  RE+  ++LP+LDD+   + +    T+ +++E L ++  +      ++  + AIL+ + +  E+D+P++L E++  QL  AQ LQ   Q G+K  E ++  +   P+ + +  E       + +++ LA+  I ++E +   + +L  EVE  +A   Q+ Q L
Sbjct:  164 RPAQLGDVVVIDFAARDAEGNPLDEMTTQDFQLELKE-DNFIPGFVAGIVGMQLDETKEIAATFPDDYFRKELAGKTVTFIVCLREIKAKELPELDDAFVQE-ISSFQTVAELREHLQKRLEQDALRQSEENLETAILNAILETTEVDLPETLIEQETTQLL-AQSLQALRQEGIKPGELRKFLSELPPETLNQLKERHRPEAIDRLRRTLALSAIVRQEQIAVGSTELDVEVEEVMAAYAQQGQKL 407          
BLAST of EY661541 vs. ExPASy Swiss-Prot
Match: TIG_ANASP (Trigger factor OS=Anabaena sp. (strain PCC 7120) GN=tig PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18
Identity = 60/243 (24.69%), Postives = 124/243 (51.03%), Query Frame = 3
Query:   12 AIVD----ISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQL--AALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQR 722
            A+VD    I+    D++ +  + IP  +   F  + ++ D+ +PGF+  I G+  G+TK     FP+ +  + L G  A FTV  +E+  ++LP+L+D  A + +    T+E ++ +L ++ ++  +         A+L +L K +E+D+P++L E++         +  Q  M+L++Q L    L +   + +  E         +K++L + ++ KRE++  + E    E++  + EL Q+
Sbjct:  172 AVVDFKGVIAKAEGDDENAEPEPIPGGDASDFQVELQE-DRFIPGFVTGIVGMNPGDTKEVSAQFPDPYVNQELAGKPAIFTVTLKEIKEKELPELNDDFAQE-VSDFDTLEALRASLAERYQKEAEDKTKNNQQEALLGELVKHIEVDLPETLIEKE------VDAMLTQTAMRLSQQGLDVKKLFTQDIIPQLRERSRPEAVERLKRSLGLQEVAKRESITVTPE----EIQARVTELVQQ 402          
The following BLAST results are available for this feature:
BLAST of EY661541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
TIG_TRIEI1.417e-2227.50Trigger factor OS=Trichodesmium erythraeum (strain... [more]
TIG_CALS82.417e-2233.01Trigger factor OS=Caldicellulosiruptor saccharolyt... [more]
TIG_NOSP75.039e-2027.24Trigger factor OS=Nostoc punctiforme (strain ATCC ... [more]
TIG_ANATD5.572e-1931.94Trigger factor OS=Anaerocellum thermophilum (strai... [more]
TIG_SYNJA1.241e-1825.51Trigger factor OS=Synechococcus sp. (strain JA-3-3... [more]
TIG_STAHJ1.241e-1829.67Trigger factor OS=Staphylococcus haemolyticus (str... [more]
TIG_PROMA1.241e-1823.84Trigger factor OS=Prochlorococcus marinus GN=tig P... [more]
TIG_ANAVT1.241e-1825.10Trigger factor OS=Anabaena variabilis (strain ATCC... [more]
TIG_SYNJB2.117e-1825.91Trigger factor OS=Synechococcus sp. GN=tig PE=3 SV... [more]
TIG_ANASP2.765e-1824.69Trigger factor OS=Anabaena sp. (strain PCC 7120) G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-034-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661541 ID=EY661541; Name=EY661541; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGCAATCGTTGATATATCAGCAACAACAATAGATGAAGAT
GAATCAAATGTTCAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTT
TGATACAGAAGATGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAA
GTGGAATTCAACGAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAA
TCCTGGAGACAAGAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGA
ATGCAGAGAACTGTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTG
CTGGAAAGCTTCTTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACA
TTATTGCAGAAGTGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGAC
TGATAATGCAATTCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTC
CTCAATCCTTGTTTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTT
TTGCAGATGCAGGCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCT
ATCAAGCCCAAAAGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACA
TAACCAATGTGATAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGT
GAAAATTTGCAGTTTTCGACTGAAGACTTAGTCAAAGAGGTTGAAAACTC
CATTGCTGAATTAAAACAACGGAACCAGAATTTGGTGGGGATTCCCGTAG
AAAACGGGTGAAAACTTCTCCAAGGAGCTAAGTTCCCGATGGTTGAAAGA
ACTGCAGAAATTCGGACTTACCCGAGGGAACTTCCCATAATTGAAAGGGG
CTTAGGTGGCAGGCCCGAATTAAAAATGCTTGCAAAGG
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