EY661524

Overview
NameEY661524
Unique NameEY661524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5486 contig Csv1_Contig5486:382..1303. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.210e-25
Identity = 63/102 (61.76%), Postives = 68/102 (66.67%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXXXQGPG----------EKAVPAPQPAEGXKKAKK 292
            ++IDKHMYHDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN                +GPG            A PAP  A   KK+KK
Sbjct:  113 KKIDKHMYHDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.600e-24
Identity = 63/96 (65.62%), Postives = 68/96 (70.83%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXXXQGPG---EKAVPAPQPAE-GXKKAKK 292
            ++ID+HMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN                +GPG     A P  Q AE   KK+KK
Sbjct:  113 KKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLAKGPGGDIPAAAPPAQTAEVPAKKSKK 208          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.037e-23
Identity = 61/96 (63.54%), Postives = 65/96 (67.71%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXXXQGP--GEKAVP--APQPAEGXKKAKK 292
            ++ID+HMYHDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KN                QGP  GE   P  APQ  E  KK  K
Sbjct:  113 KKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREERLAQGPGGGETTTPAGAPQQPEVTKKKSK 208          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 37/53 (69.81%), Postives = 48/53 (90.57%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 175
            ++ID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct:  113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL19_RAT (60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 37/53 (69.81%), Postives = 48/53 (90.57%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 175
            ++ID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct:  113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL19_PONAB (60S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 37/53 (69.81%), Postives = 48/53 (90.57%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 175
            ++ID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct:  113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL19_MOUSE (60S ribosomal protein L19 OS=Mus musculus GN=Rpl19 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 37/53 (69.81%), Postives = 48/53 (90.57%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 175
            ++ID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct:  113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL19_MACFA (60S ribosomal protein L19 OS=Macaca fascicularis GN=RPL19 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 37/53 (69.81%), Postives = 48/53 (90.57%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 175
            ++ID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct:  113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL19_HUMAN (60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 37/53 (69.81%), Postives = 48/53 (90.57%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 175
            ++ID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct:  113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165          
BLAST of EY661524 vs. ExPASy Swiss-Prot
Match: RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 37/53 (69.81%), Postives = 48/53 (90.57%), Query Frame = 2
Query:   17 EEIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 175
            ++ID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct:  113 KKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165          
The following BLAST results are available for this feature:
BLAST of EY661524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
RL191_ARATH4.210e-2561.7660S ribosomal protein L19-1 OS=Arabidopsis thalian... [more]
RL193_ARATH1.600e-2465.6360S ribosomal protein L19-3 OS=Arabidopsis thalian... [more]
RL192_ARATH1.037e-2363.5460S ribosomal protein L19-2 OS=Arabidopsis thalian... [more]
RL19_XENLA1.039e-1569.8160S ribosomal protein L19 OS=Xenopus laevis GN=rpl... [more]
RL19_RAT1.039e-1569.8160S ribosomal protein L19 OS=Rattus norvegicus GN=... [more]
RL19_PONAB1.039e-1569.8160S ribosomal protein L19 OS=Pongo abelii GN=RPL19... [more]
RL19_MOUSE1.039e-1569.8160S ribosomal protein L19 OS=Mus musculus GN=Rpl19... [more]
RL19_MACFA1.039e-1569.8160S ribosomal protein L19 OS=Macaca fascicularis G... [more]
RL19_HUMAN1.039e-1569.8160S ribosomal protein L19 OS=Homo sapiens GN=RPL19... [more]
RL19_BOVIN1.039e-1569.8160S ribosomal protein L19 OS=Bos taurus GN=RPL19 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-034-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661524 ID=EY661524; Name=EY661524; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGAGTCGAAGAAATTGACAAGCACATGTACCATGACATGT
ACATGAAGGTCAAGGGTAATGTATTTAAGAACAAGCGTGTCCTCATGGAG
AGTATCCACAAGTCAAAGGCTGAAAAGGCAAGAGAGAAGACTCTTTCTGA
CCAGTTTGAGGCTAAGCGCGCCAAGAACAAGGCCAGCAGGGAGAGAAAGC
TGGCCAGGAGAGAAGAGCGACTAGCACAGGGACCTGGAGAGAAGGCAGTA
CCAGCACCCCAACCAGCTGAGGGANCTAAGAAAGCTAAGAAGTGATCGCT
GATACATCGATGATGGAGACTGAAGATTGATAACTTATATATGTTAATGT
TGGTTCTGGTTTCTTTGTAGGAGTTTGTTTCCCAAGTTATTTTGTTTTCT
GTTTAATGGCAAATTATTTACTTATAAAGCCTTGAATTTTGGAACCATAT
GAACCCGTTCGAAGTTCCNGGCTATGTTGAATGATGAGTATTATGTTCAT
TAAAAACAAAAACAGCAGGGAAAGGAGNTGCATATCATAACAGAAAGTGA
AGGTCCTGGTGGGCATAGGATATGGTCTCCCCTGATATCGCGTGTTCCTC
TTACCCGNNACATAACGGGGGGGGGCGGTCTAAGGAGTATCAGGTTGTGT
NAANGTGGGGGGGCACACCCTAACTCCTGTTCTGGGGCGCCCCAANANAC
CATCACTGGCTGCGAGTTGCTAAGAAACACAGTAGAAGAAACACCGCGAT
AAGTCCCCTATGCACAGGGGCGGACGCGCCCCCCTCCTTCAGTGGGTGAG
AAATACAAAAAGGGCACGGCCCGCGAGTGTCTTTCCCACTAGGTGCGCTC
CTGTGAGGGATTGGAGACACCACCTCTGACCGCAGCTCAAGCTGCGTGGC
GGGTGTGTGATCCGACACGTCGAG
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