EY661498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: RH7_SPIOL (DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea GN=RH7 PE=2 SV=1) HSP 1 Score: 412.535 bits (1059), Expect = 1.559e-114 Identity = 208/276 (75.36%), Postives = 236/276 (85.51%), Query Frame = 3 Query: 3 KVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGXXXXXXXXXXXXXXVGYTEIKSRSLLSSLEDHXTVVLESRSP 830 KVQTLLFSATLPSWVK IST+FLKS KKT+DLV ++KMKAS +VRHIV+PCS+SAR +IPDIIRCY SGGR+IIFTETKESASQLA LL GAR LHGDIQQ+QREVTL GFR+GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE YIHRSGRTGRAGNTGVAVMLYDP++SSV+KIERESGVKFEH+SAPQP D+AKA G+EAA I Q+SDSVIPAFK AAEELL+ SG GY++IK RSLL+ +E + T++L++ P Sbjct: 292 KVQTLLFSATLPSWVKQISTRFLKSAKKTVDLVSDQKMKASISVRHIVIPCSASARPDLIPDIIRCYGSGGRSIIFTETKESASQLAGLLTGARPLHGDIQQTQREVTLKGFRTGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDPKRSSVTKIERESGVKFEHLSAPQPVDVAKAVGIEAAAAILQISDSVIPAFKDAAEELLSTSGLSAVDILSKALAKAAGYSDIKERSLLTGMEGYVTLLLDAGRP 567
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: RH7_ORYSJ (DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica GN=Os09g0520700 PE=2 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 6.778e-110 Identity = 198/274 (72.26%), Postives = 235/274 (85.77%), Query Frame = 3 Query: 3 KVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPR-KSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGXXXXXXXXXXXXXXVGYTEIKSRSLLSSLEDHXTVVLES 821 KVQTLLFSAT+P WVK +S +FLKS KKT+DLVG+EK+KAS +VRH+ LPC+ +AR+QVIPDIIRCYS GGRTIIFTETKESAS L+ L+ G+RALHGD+ Q+QREV LAGFRSGKF+ LVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML++PR K +V++IERESGVKFEHISAPQP D+A++AG EAAE I+ VSDSVIP F+ AE+LLN+SG VGYT+IK RSLLSS+++H T++L++ Sbjct: 300 KVQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRTIIFTETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERESGVKFEHISAPQPTDVAQSAGTEAAEAISSVSDSVIPVFREQAEQLLNSSGMSAVDLLAKALAKAVGYTDIKKRSLLSSMDNHTTLLLQT 573
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: RH7_ARATH (DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana GN=RH7 PE=1 SV=2) HSP 1 Score: 384.415 bits (986), Expect = 4.546e-106 Identity = 192/276 (69.57%), Postives = 230/276 (83.33%), Query Frame = 3 Query: 3 KVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGXXXXXXXXXXXXXXVGYTEIKSRSLLSSLEDHXTVVLESRSP 830 KVQTLLFSATLPSWVK+IS +FLK D+KTIDLVGN+KMKAS +VRHI +PC+ +A +++IPDII CYSSGG+TIIF ETK S+L+ LL G+RALHG+I QSQREVTLAGFR+GKF TLVATNVAARGLDINDVQLIIQCEPPR+VEAYIHRSGRTGRAGNTGVAV LYD RKSSVS+IE+E+G+KFEH++APQP +IA++ G+EAAE + QV DSV+PAF AA+ELL SG G+TEIK RSLL+S+E++ T+ LE+ P Sbjct: 281 KVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGSRALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAKELLETSGLSAEVLLAKALAKTAGFTEIKKRSLLTSMENYVTLHLEAGKP 556
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX50_MOUSE (ATP-dependent RNA helicase DDX50 OS=Mus musculus GN=Ddx50 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.445e-59 Identity = 122/285 (42.81%), Postives = 175/285 (61.40%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYS-SGGRTIIFTETKESASQLA---DLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPR-KSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGXXXXXXXXXXXXXXVGYTEIKSRSLLSSLEDHXTVVLESRSPSTTILC 848 QTLLFSAT P WV ++ K++KS + +DLVG KA+T V H+ + C S R VI D+++ YS S GR IIF ETK++ +++A + A+ LHGDI QSQRE+TL GFR G F LVATNVAARGLDI +V L+IQ PP+DVE+YIHRSGRTGRAG TG+ V Y PR + + +E+++G+ F+ + P D+ K+ ++A ++ VS + + F+ +A+ L+ G G + + RSL++S + T+ LES + C Sbjct: 318 QTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHIS--GASSFEPRSLITSDKGFVTMTLESPEEIQDVSC 600
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX50_HUMAN (ATP-dependent RNA helicase DDX50 OS=Homo sapiens GN=DDX50 PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.193e-59 Identity = 121/285 (42.46%), Postives = 175/285 (61.40%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYS-SGGRTIIFTETKESASQLA---DLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPR-KSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGXXXXXXXXXXXXXXVGYTEIKSRSLLSSLEDHXTVVLESRSPSTTILC 848 QTLLFSAT P WV ++ K++KS + +DLVG KA+T V H+ + C S R VI D+++ YS S GR IIF ETK++ +++A + A+ LHGDI QSQRE+TL GFR G F LVATNVAARGLDI +V L+IQ PP+DVE+YIHRSGRTGRAG TG+ + Y PR + + +E+++G+ F+ + P D+ K+ ++A ++ VS + + F+ +A+ L+ G G + + RSL++S + T+ LES + C Sbjct: 321 QTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHIS--GASSFEPRSLITSDKGFVTMTLESLEEIQDVSC 603
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX21_MOUSE (Nucleolar RNA helicase 2 OS=Mus musculus GN=Ddx21 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 9.289e-59 Identity = 121/274 (44.16%), Postives = 174/274 (63.50%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSG-GRTIIFTETKESASQLAD---LLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKS-SVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGXXXXXXXXXXXXXXVGYTEIKSRSLLSSLEDHXTVVL 815 QTLLFSAT P WV +++ K++KS + +DL+G + KA+ V H+ + C + R+ VI D+IR YS GRTIIF ETK+ A +L+ + A++LHGDI Q QRE+TL GFR+G F LVATNVAARGLDI +V L++Q PP+DVE+YIHRSGRTGRAG TGV + Y ++ ++++E+++G+KF+ I P +I KA+ +A + V + I FK +AE+L+ G G T + RSL++S T++L Sbjct: 442 QTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHIS--GATSVDQRSLINSQAGFVTMIL 713
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX21_RAT (Nucleolar RNA helicase 2 OS=Rattus norvegicus GN=Ddx21 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.213e-58 Identity = 121/274 (44.16%), Postives = 174/274 (63.50%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSG-GRTIIFTETKESASQLAD---LLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKS-SVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGXXXXXXXXXXXXXXVGYTEIKSRSLLSSLEDHXTVVL 815 QTLLFSAT P WV +++ K++KS + +DL+G + KA+ V H+ + C + R+ VI D+IR YS GRTIIF ETK+ A +L+ + A++LHGDI Q QRE+TL GFR+G F LVATNVAARGLDI +V L++Q PP+DVE+YIHRSGRTGRAG TGV + Y ++ ++++E+++G+KF+ I P +I KA+ +A + V + I FK +AE+L+ G G T + RSL++S T++L Sbjct: 366 QTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHIS--GATSVDQRSLINSQAGFVTMIL 637
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: DDX21_HUMAN (Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5) HSP 1 Score: 226.483 bits (576), Expect = 1.584e-58 Identity = 121/275 (44.00%), Postives = 173/275 (62.91%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSG-GRTIIFTETKESASQLAD---LLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKS-SVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGXXXXXXXXXXXXXXVGYTEIKSRSLLSSLEDHXTVVLE 818 QTLLFSAT P WV +++ K++KS + +DL+G + K + V H+ + C + R+ VI D+IR YS GRTIIF ETK+ A +L+ + A++LHGDI Q QRE+TL GFR+G F LVATNVAARGLDI +V L+IQ PP+DVE+YIHRSGRTGRAG TGV + Y ++ + ++E+++G+KF+ I P +I KA+ +A + V + I FK +AE+L+ G G T + RSL++S T++L+ Sbjct: 370 QTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHIS--GATSVDQRSLINSNVGFVTMILQ 642
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: RH3_ORYSJ (DEAD-box ATP-dependent RNA helicase 3 OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.941e-48 Identity = 103/236 (43.64%), Postives = 152/236 (64.41%), Query Frame = 3 Query: 9 QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGA---RALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY-DPRKSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSG 704 Q++LFSAT+P WVK +S ++L ++ TIDLVG++ K + ++ +P +S+++ V+ D+I Y+ GG+TI+FT+TK A +++ L + ALHGDI Q QRE TL GFR GKF LVAT+VAARGLDI +V LII E P D E ++HRSGRTGRAG G A++++ + ++ +V +ER+ G +F+ IS P D+ +++ T+ V I F AAE L G Sbjct: 285 QSMLFSATMPGWVKKLSRRYL-NNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQEELG 519
BLAST of EY661498 vs. ExPASy Swiss-Prot
Match: RH3_ARATH (DEAD-box ATP-dependent RNA helicase 3 OS=Arabidopsis thaliana GN=RH3 PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.817e-46 Identity = 98/238 (41.18%), Postives = 150/238 (63.03%), Query Frame = 3 Query: 3 KVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGA---RALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY-DPRKSSVSKIERESGVKFEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSG 704 K Q++LFSAT+P+WVK ++ K+L + IDLVG++ K + ++ + +S+++ ++ D+I Y+ GG+TI+FT+TK A +++ L + ALHGDI Q QRE TL FR GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTGRAG G A++++ +K +V +ER+ G FE IS P D+ +++ + T+ V I F + A++L G Sbjct: 283 KRQSMLFSATMPTWVKKLARKYL-DNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKG 519 The following BLAST results are available for this feature:
BLAST of EY661498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661498 ID=EY661498; Name=EY661498; organism=Citrus sinensis; type=EST; length=882bpback to top |