EY661497

Overview
NameEY661497
Unique NameEY661497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661497 vs. ExPASy Swiss-Prot
Match: PPL1_ARATH (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=PPL1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42
Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 1
Query:    7 VRVNLIPTGKQDIRDFGPPQEVAETLIKKFLAPPTQKTKIIAASENDVDGKAYYAFEFTAQAPNYIRHALGVVTVGNGKFYTLTTGANERRWGKMKDRLQTVIESFKIS 333
            V VNL+PT KQ I++FGPP+++AETLIKK LAPP QKT +I ASE+DVDGK YY FEFT QA NY RHALG +TV NG FYTLTTGANERRW KMKDRL TV++SFKI+
Sbjct:  121 VSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKIT 229          
BLAST of EY661497 vs. ExPASy Swiss-Prot
Match: PPL2_ARATH (PsbP-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=PPL2 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.434e-21
Identity = 51/111 (45.95%), Postives = 63/111 (56.76%), Query Frame = 1
Query:    7 VRVNLIPTGKQDIRDFGPPQEVAETLIKKFLAPPTQKTKIIAASENDVDGKAYYAFEFTAQAPNYIRHALGVVTVGNGKFYTLTTGANERRWGKMKDRLQTVIESFKISNV 339
            VRV  IPT K DI + GP +EV   L+K   A P Q   I    E   DGK YY FE+  + P Y   +   V VGN ++YTL  GANERRW K+K +LQ V +S KI  +
Sbjct:  128 VRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238          
The following BLAST results are available for this feature:
BLAST of EY661497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PPL1_ARATH6.612e-4273.39PsbP-like protein 1, chloroplastic OS=Arabidopsis ... [more]
PPL2_ARATH6.434e-2145.95PsbP-like protein 2, chloroplastic OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661497 ID=EY661497; Name=EY661497; organism=Citrus sinensis; type=EST; length=677bp
CCACGCGTCCGTGTAAATCTAATCCCAACCGGTAAACAGGATATTCGAGA
CTTTGGCCCTCCCCAAGAGGTTGCAGAGACTTTAATCAAAAAGTTTTTGG
CCCCTCCTACGCAGAAAACAAAGATCATTGCCGCTTCAGAGAATGATGTT
GATGGGAAAGCTTATTACGCATTTGAGTTCACTGCCCAAGCGCCCAACTA
CATCCGTCATGCTCTTGGGGTAGTCACTGTTGGCAATGGTAAGTTCTACA
CCTTGACAACAGGGGCCAACGAGAGAAGATGGGGGAAGATGAAAGATAGA
TTGCAAACAGTCATTGAATCCTTTAAAATTTCCAATGTTTGATCTGTTTG
TCCAGCTTTTACCTACCAAACCAGGGACATCAAGCTCTAAACAGCAAGCA
CCATTGTGCATTTTCCAGAGTTATGAGGCTTAATTGTTACATGCAAAGGG
AACCTAGAGCATCAATAGGGGGATGATTATCATGCCAAGGACTTCTCAAG
CAAAAATACCATTTCAGTTCATATCTTATATACTTGTTTATGCCTTAATT
AACTTGTGAAGCAATTTTTAATTCCTCTGTGTATAACTTGTGAATCTCAA
AAGTTGCAACTATCTTCACATAATGGTCTAAATTTTCTGAACTTAAAAGT
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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