EY661495

Overview
NameEY661495
Unique NameEY661495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7543 contig Csv1_Contig7543:1..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 5.639e-86
Identity = 146/229 (63.76%), Postives = 186/229 (81.22%), Query Frame = 1
Query:   70 IVLIHVLVCLSASLVST---EGFDSLLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASRG 747
            +V + +L+ +++SL  T     F+SLL+LP   S  TR +S+R++ VG+FGAKG+G  DDT+AFA+AWK ACS   +T+I+    YT L+ PID+SGPCK+RLTL+ISGTI+AP DPDVW+GLNRR+WLYF+ ++ LTV+GGGT+NGMGQEWW RSCK N +NPCR APTA+TFHKCKN++V+NL V++SQQMHIA T+C RV IS LKVIAPA SPNTDGIHIS SRG
Sbjct:    9 LVTLLLLLVVASSLALTANANSFESLLQLPRRQSRSTRPRSERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLLRPIDLSGPCKARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRG 237          

HSP 2 Score: 25.409 bits (54), Expect = 5.639e-86
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  759 DSIVGTGDDCISIGGNS 809
            ++ V TGDDCISI  NS
Sbjct:  242 NTTVSTGDDCISIVKNS 258          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.200e-51
Identity = 93/184 (50.54%), Postives = 123/184 (66.85%), Query Frame = 1
Query:  193 IFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASR 744
            I V DFGA+GDG  DDT+AF  AWK ACS  + + ++      +L+  I  SGPCKS L +KI GTI A  D   W G NR+RW+ F  +++LT++GGGT NG G+ WW  SCK   + PC+ APTA+TF  CKNL V +L + +SQ+MH++F  C  V+ SNL V AP  SPNTDGIHI+ ++
Sbjct:   85 ISVDDFGARGDG-TDDTKAFEKAWKDACS--SGSVLIVPENKNYLLKQITFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEGGGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQ 265          

HSP 2 Score: 28.8758 bits (63), Expect = 8.200e-51
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  759 DSIVGTGDDCISIGGNS 809
            +S++GTGDDCISI   S
Sbjct:  271 NSVIGTGDDCISIESGS 287          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 6.832e-50
Identity = 98/196 (50.00%), Postives = 131/196 (66.84%), Query Frame = 1
Query:  157 GSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASR 744
            G +R    SK V  V DFGAKGDG  DDT+AF  AWK ACS  + + ++      +L+ PI  SGPCKS LT++I GTI A  D   ++  + R WL F+ V +L V+GGGTING G+ WW  SCK N   PC+ APTA+TF+K K++ V+NL + N+QQ+H++F NC+ V  SNL V AP  SPNTDGIH++ ++
Sbjct:   79 GMDRVLDASKTVN-VDDFGAKGDG-RDDTKAFEKAWKAACSSTS-SAVLLVPKKNYLVRPISFSGPCKSGLTMQIYGTIEASDDRSDYRK-DGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQ 270          

HSP 2 Score: 27.7202 bits (60), Expect = 6.832e-50
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  756 SDSIVGTGDDCISIGGNS 809
            S  ++GTGDDCISI   S
Sbjct:  275 SSCVIGTGDDCISIVNGS 292          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_MALDO (Polygalacturonase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.351e-49
Identity = 96/195 (49.23%), Postives = 127/195 (65.13%), Query Frame = 1
Query:  154 SGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPC-RHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHIS 735
            +G   T S   + I V DFGAKG+G  DDT+AF  AWK ACS      +V      +L+ PI+ SGPCKS+LTL+I GTI A +D  ++K ++   WL F+ V +L V G GTING G  WW  SCKI    PC  +APTA+TF++C NL V+NL + ++QQ+H+ F NC+ V  S L V AP +SPNTDGIH++
Sbjct:   86 TGGIATSSAPAKTISVDDFGAKGNGA-DDTQAFVKAWKAACSSSGAMVLVVPQK-NYLVRPIEFSGPCKSQLTLQIYGTIEASEDRSIYKDIDH--WLIFDNVQNLLVVGPGTINGNGNIWWKNSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASCLTVTAPEDSPNTDGIHVT 276          

HSP 2 Score: 29.6462 bits (65), Expect = 3.351e-49
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  756 SDSIVGTGDDCISIGGNS 809
            S S++GTGDDCISI   S
Sbjct:  284 SSSVIGTGDDCISIVSGS 301          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 3.353e-49
Identity = 90/192 (46.88%), Postives = 126/192 (65.62%), Query Frame = 1
Query:  166 RTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGG--GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHIS 735
            R   ++   + V DFGAKGDG  DDT+AF NAWKKACS      ++   G T+L+  I ++GPC S LT++I GT+ A +    +K +++  W+ F+ VN+L+V GG  G ++G G+ WW  SCK N   PC  APTA+TF+  K+L V+NL V N+QQ+ I+   C  V +SN+ V APA+SPNTDGIHI+
Sbjct:   59 RASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISK--WIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHIT 248          

HSP 2 Score: 31.187 bits (69), Expect = 3.353e-49
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  756 SDSIVGTGDDCISIGGNS 809
            S+SI+GTGDDCISI   S
Sbjct:  256 SESIIGTGDDCISIESGS 273          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 7.420e-49
Identity = 93/183 (50.82%), Postives = 118/183 (64.48%), Query Frame = 1
Query:  187 RVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHIS 735
            +VI V  FGAKGDG   D  AF  AW +ACS     + V      +L+  I  SGPC+S +++KI G++ A      +K  +RR W+ F+ V +L V GGGTING GQ WW  SCKIN + PCR APTA+TF  CKNLKV NL   N+QQ+HI F +C  VV SNL + A A+SPNTDG+H+S
Sbjct:   74 KVINVLSFGAKGDGKTYDNIAFEQAWNEACSSRTPVQFVVPKNKNYLLKQITFSGPCRSSISVKIFGSLEASSKISDYK--DRRLWIAFDSVQNLVVGGGGTINGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVS 254          

HSP 2 Score: 31.187 bits (69), Expect = 7.420e-49
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  756 SDSIVGTGDDCISIGGNS 809
            SD+I+GTGDDCISI   S
Sbjct:  262 SDTIIGTGDDCISIVSGS 279          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.236e-45
Identity = 98/242 (40.50%), Postives = 137/242 (56.61%), Query Frame = 1
Query:   58 STFFIVLIHVLVCLSASLVSTEGF---------DSLLELPHSG-----SNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGT--INGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHIS 735
            + F  VL+ + +C + S    +G+         DSLL+L +       S+   +     + V +FGAKGDG  DDT+AF  AWKKACS    T  +   G T+L+      GPCKS    +I GT+ A      +K  N   WL    VN+L++ GG T  ING G+ WW  SCKI+ + PC  APTA+T +  KNL V+NL V N+QQ+ I+   C +V +SN+++ AP +SPNTDGIHI+
Sbjct:    9 AVFLCVLLMLSLCKALSSNVDDGYGHEDGSFESDSLLKLNNDDVLSLISSDETTLEASTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLVPKGKTYLLKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNH--WLILEDVNNLSIDGGSTGIINGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHIT 248          

HSP 2 Score: 27.335 bits (59), Expect = 1.236e-45
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  756 SDSIVGTGDDCISI 797
            S+S +GTGDDCISI
Sbjct:  256 SNSDIGTGDDCISI 269          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.610e-45
Identity = 90/189 (47.62%), Postives = 120/189 (63.49%), Query Frame = 1
Query:  181 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTL-KISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASR 744
            S R   V  FGAK +G NDD++AF  AW+ ACS      IV      +++  +  SGPCKS L + KI G I A ++P  +K   RR W+ F  VN+L V+GGG I+G G  WW +SCKIN   PC  APTA+TF +C NL+V N+ + N+QQMH+ F +C  V   NL V +PA+SPNTDGIH+S ++
Sbjct:   67 SPRSFNVNTFGAKANG-NDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSSLIIFKIYGRIEAWENPSDYK--ERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQ 252          

HSP 2 Score: 28.1054 bits (61), Expect = 1.610e-45
Identity = 13/17 (76.47%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  759 DSIVGTGDDCISIGGNS 809
            DSIV TGDDCISI   S
Sbjct:  258 DSIVRTGDDCISIVSGS 274          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.031e-37
Identity = 84/207 (40.58%), Postives = 115/207 (55.56%), Query Frame = 1
Query:  133 SLLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKI-NTTNPC--RHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASR 744
            SL +L HS     R  +  V  V  +GA GDG +D TEAFA  W  AC   A   ++  A   F ++ +   GPC+  L+ K+ GTIVA  DP  WK  N + WL F ++    + G G I+G GQ+WW+  CK+ N    C  R+ PTAI     K++ V+ L ++NS + H+ F  C  V I  LK+ AP +SPNTDGI I AS+
Sbjct:   44 SLKKLVHS-----RHDAATVFNVEQYGAVGDGKHDSTEAFATTWNAACK-KASAVLLVPANKKFFVNNLVFRGPCQPHLSFKVDGTIVAQPDPARWK--NSKIWLQFAQLTDFNLMGTGVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASK 242          

HSP 2 Score: 28.1054 bits (61), Expect = 3.031e-37
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  765 IVGTGDDCISIGGNS 809
            ++GTGDDCI+IG  S
Sbjct:  250 VIGTGDDCIAIGTGS 264          
BLAST of EY661495 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.713e-35
Identity = 80/207 (38.65%), Postives = 116/207 (56.04%), Query Frame = 1
Query:  133 SLLELPHSGSNRTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCK-INTTNPC--RHAPTAITFHKCKNLKVQNLXVVNSQQMHIAFTNCLRVVISNLKVIAPAESPNTDGIHISASR 744
            SL ++ HS     R  +  +  V  +GA GDG +D TEAF+ AW+ AC  P+   +V      F+++ +  +GPC+   T K+ G I A ++P  WK  N R WL F ++   T+ G G I+G G++WW+  CK +N    C  R  PTAI F     L +Q L ++NS + H+ F NC  V I  + + AP +SPNTDGI I AS+
Sbjct:   44 SLRKVEHS-----RHDAINIFNVEKYGAVGDGKHDCTEAFSTAWQAACKKPSAMLLV-PGNKKFVVNNLFFNGPCQPHFTFKVDGIIAAYQNPASWK--NNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASK 242          

HSP 2 Score: 26.5646 bits (57), Expect = 2.713e-35
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  768 VGTGDDCISIGGNS 809
            +GTGDDC++IG  S
Sbjct:  251 IGTGDDCVAIGTGS 264          
The following BLAST results are available for this feature:
BLAST of EY661495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
PGLR5_ARATH5.639e-8663.76Probable polygalacturonase At1g80170 OS=Arabidopsi... [more]
PGLR_PERAE8.200e-5150.54Polygalacturonase OS=Persea americana PE=2 SV=1[more]
PGLR_ACTDE6.832e-5050.00Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1[more]
PGLR_MALDO3.351e-4949.23Polygalacturonase OS=Malus domestica PE=2 SV=1[more]
ADPG2_ARATH3.353e-4946.88Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN... [more]
PGLR_SOLLC7.420e-4950.82Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2... [more]
ADPG1_ARATH1.236e-4540.50Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN... [more]
QRT2_ARATH1.610e-4547.62Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=... [more]
PGLR2_CHAOB3.031e-3740.58Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=... [more]
PGLR2_CRYJA2.713e-3538.65Polygalacturonase OS=Cryptomeria japonica PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661495 ID=EY661495; Name=EY661495; organism=Citrus sinensis; type=EST; length=835bp
CCACGCGTCCGAATTCAGTTAAGAAAGAACATGAAGCAACTTAAGTTTTG
TTCGTTTTCAACATTTTTTATAGTTCTAATCCATGTGCTTGTTTGTCTGT
CAGCAAGCTTGGTTTCTACAGAAGGCTTTGACTCGTTGTTGGAGCTCCCA
CATTCTGGGTCAAACAGAACTCGATCCAAATCCAAAAGGGTAATTTTTGT
TGGTGATTTTGGTGCCAAAGGAGATGGCTTCAATGATGACACTGAGGCAT
TTGCAAATGCTTGGAAGAAGGCTTGTTCTTTTCCTGCACGAACAAAAATT
GTTTTTTCAGCTGGATACACTTTTCTAATCCATCCCATCGATATTTCTGG
GCCCTGTAAATCTAGACTTACTTTGAAGATATCTGGAACAATAGTTGCTC
CTAAAGATCCTGATGTCTGGAAGGGTTTGAATCGACGTAGATGGCTCTAC
TTTAATCGGGTGAACCATCTTACTGTACAAGGAGGAGGGACAATCAATGG
AATGGGACAGGAATGGTGGTCAAGATCCTGCAAGATTAACACAACAAATC
CATGTCGACATGCTCCAACGGCTATTACTTTTCATAAGTGCAAGAATTTG
AAAGTCCAGAACCTTANGGTGGTCAACAGTCAACAAATGCACATTGCATT
CACTAATTGTCTACGGGTTGTGATATCCAATCTCAAGGTGATTGCACCTG
CTGAAAGTCCTAATACNGATGGGATACACATCAGTGCATCTCGTGGTGGT
GAAAGTCAGATAGCATAGTTGGAACAGGAGATGACTGCATATCTATAGGT
GGGAATTCTCACTAATCCGATCAGAAACTTTGCTG
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