EY661491

Overview
NameEY661491
Unique NameEY661491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661491 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 1.874e-13
Identity = 43/105 (40.95%), Postives = 51/105 (48.57%), Query Frame = 3
Query:   99 SVGCIFSSSYARVKRYARTHDNLERLAMYGLGRCGPLPQHMIPTAYLEEPKTISGYAS*LNCPEGAWS*GRVLLPRKRLHRLNNMASLHVHRTRPTLTDLLHGFV 413
            S+GCI          + +THDNLE LAM      GPLP+HM   A     K        LN PEGA S    +   KRL RL +M S HV  TR    DLL+G +
Sbjct:  277 SIGCILFELCTGEALF-QTHDNLEHLAMMERA-LGPLPEHMTRKASRGAEKYFRRGCR-LNWPEGANS-RESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLL 377          

HSP 2 Score: 41.9726 bits (97), Expect = 1.874e-13
Identity = 17/21 (80.95%), Postives = 18/21 (85.71%), Query Frame = 1
Query:   25 VSTRHYRAPEVILWLGWSYPC 87
            V TRHYR+PEVIL LGWSY C
Sbjct:  253 VQTRHYRSPEVILGLGWSYQC 273          
BLAST of EY661491 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 45.4394 bits (106), Expect = 3.637e-13
Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 1
Query:   25 VSTRHYRAPEVILWLGWSYPC 87
            VSTRHYRAPEVIL +GW+YPC
Sbjct:  300 VSTRHYRAPEVILGVGWNYPC 320          

HSP 2 Score: 43.8986 bits (102), Expect = 3.637e-13
Identity = 39/105 (37.14%), Postives = 50/105 (47.62%), Query Frame = 3
Query:   99 SVGCIFSSSYARVKRYARTHDNLERLAMYGLGRCGPLPQHMIPTAYLEEPKTISGYAS*LNCPEGAWS*GRVLLPRKRLHRLNNMASLHVHRTRPTLTDLLHGFV 413
            S+GCI     +    + +TH+NLE LAM      GPLP HM+  A     K     A  L+ PEGA S   +    K L RL N+   HV  +   L DLL G +
Sbjct:  324 SIGCILVELCSGEALF-QTHENLEHLAMME-RVLGPLPPHMVLRADRRSEKYFRRGAK-LDWPEGATSRDSLKAVWK-LPRLPNLIMQHVDHSAGDLIDLLQGLL 424          

HSP 3 Score: 26.1794 bits (56), Expect = 3.637e-13
Identity = 12/25 (48.00%), Postives = 14/25 (56.00%), Query Frame = 2
Query:  413 LRYDPSLRLTARIGLDHRFMRHVNE 487
            LRYDP+ R  AR  L+H F     E
Sbjct:  424 LRYDPTERFKAREALNHPFFTRSRE 448          
BLAST of EY661491 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 1.026e-11
Identity = 20/21 (95.24%), Postives = 20/21 (95.24%), Query Frame = 1
Query:   25 VSTRHYRAPEVILWLGWSYPC 87
            VSTRHYRAPEVIL LGWSYPC
Sbjct:  281 VSTRHYRAPEVILGLGWSYPC 301          

HSP 2 Score: 35.8094 bits (81), Expect = 1.026e-11
Identity = 33/105 (31.43%), Postives = 47/105 (44.76%), Query Frame = 3
Query:   99 SVGCIFSSSYARVKRYARTHDNLERLAMYGLGRCGPLPQHMIPTAYLEEPKTISGYAS*LNCPEGAWS*GRVLLPRKRLHRLNNMASLHVHRTRPTLTDLLHGFV 413
            SVGCI          + +TH+NLE LAM      GP PQ M+        K +      L+ P+GA S   +    K L RL N+   HV  +   L +++ G +
Sbjct:  305 SVGCIIVELCTGEALF-QTHENLEHLAMME-RVLGPFPQQMLKKVDRHSEKYVR--RGRLDWPDGATSRDSLKAVLK-LPRLQNLIMQHVDHSAGELINMVQGLL 404          

HSP 3 Score: 26.9498 bits (58), Expect = 1.026e-11
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  413 LRYDPSLRLTARIGLDHRF 469
            LR+DPS R+TAR  L H F
Sbjct:  404 LRFDPSERITAREALRHPF 422          
The following BLAST results are available for this feature:
BLAST of EY661491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AFC3_ARATH1.874e-1340.95Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
AFC1_ARATH3.637e-1385.71Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC2_ARATH1.026e-1195.24Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661491 ID=EY661491; Name=EY661491; organism=Citrus sinensis; type=EST; length=954bp
TTGCTCGACCCACGCGTCCGCTTTGTTTCCACAAGACATTACAGAGCCCC
TGAGGTTATTCTATGGCTTGGTTGGTCTTACCCATGCGGATATGCGGCAG
TGTTGGTTGTATATTTAGCTCTAGCTATGCTCGGGTGAAGCGTTATGCTC
GAACACATGACAACTTGGAGCGTTTGGCGATGTATGGACTAGGGCGTTGC
GGTCCTCTGCCTCAGCATATGATTCCAACGGCCTACCTCGAGGAACCGAA
AACTATTTCCGGATACGCATCATGACTAAATTGTCCTGAGGGGGCATGGT
CCTAGGGCAGAGTATTATTGCCGCGCAAAAGGCTACATCGACTGAACAAT
ATGGCATCACTTCATGTACACAGAACAAGGCCTACTCTCACCGATCTGTT
GCATGGTTTCGTCTGAGATATGATCCATCCCTACGTCTCACTGCTCGGAT
AGGTCTCGATCACCGCTTCATGAGACATGTAAATGAGTAGATGCTGGCAA
CCTATGTGCAGCTAGTTGCAATGGTGGTGCTATACTGTATGCCAGTCTCT
GACTGAGTCTCCCATGTACCTGTAATCCGTGCATAAATGTCATCTTACTG
ATTATGATTTGACGTCTCTTTCAACCTTGTTTTTGCTGTCATTGCTGAGA
TTGTTCTTGTAGGTGGTGCTGAATATTATAGAATCACCAACNGTTTTGGA
TTTGGGGGGCCAGTCTCAACGATCCGGTCTCATTTTGACCACTGTGATTA
GCCAAAGATCCTGACAAATTGCACTGAATTCAATGAAGGGGACGACGATT
GAAACACTGCAATGGTGACAACCTGGGGTTCCTCCACTAAATCACGTGAC
AGGGATACCCCTTTTGAAACCGTTGTAAAAATAAAAGGCTCCTTTGGTCA
CCACTTCCATAACGGAACTCCGGAAAGGGAAAGGACCCCCCCCTTGGATT
CATT
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