EY661488

Overview
NameEY661488
Unique NameEY661488
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 443.736 bits (1140), Expect = 6.493e-124
Identity = 223/256 (87.11%), Postives = 237/256 (92.58%), Query Frame = 3
Query:   87 MSGLYNPN--FSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            MSGLYN +  FSPARAASPQIRSTP+I+  SQYL+ELLAEHQKL PF QVLPICSRLL QE+FRVSGMM NQGFGDFDRLRHRSPSPMASSNLMSNV+ TGLGGWNGL QERL G PGMTMDWQ AP SPSSYTVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKDP+KEDKLRGRPGYEHLN+ LHILIEADLPA+IV+IRLRQAQEIIEELLK VDESQD+IKRQQ RE+A+LN
Sbjct:    1 MSGLYNNSSYFSPARAASPQIRSTPEID-SSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLN 255          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 437.573 bits (1124), Expect = 4.653e-122
Identity = 214/255 (83.92%), Postives = 236/255 (92.55%), Query Frame = 3
Query:   87 MSGLYN-PNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            MSGLYN  NFSP+RAASPQIR TP  ++DSQY+S+LLAEHQKLGPF QVLPICSRLL QEIFR++GMMPNQGF DFDRLRHRSPSPMAS NLMSNV+G GLGGWNGLP ER+GGP GM M+WQ APASPSSY VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP+KE+KL+G+PGYEHLN+ LHILIEADLP +IVDI+LRQAQEIIEEL+K VDESQDYIKRQQ RE+A+LN
Sbjct:    1 MSGLYNYNNFSPSRAASPQIR-TPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLN 254          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.389e-64
Identity = 133/252 (52.78%), Postives = 173/252 (68.65%), Query Frame = 3
Query:  102 NPNFSPARAASPQIRSTPDINIDSQ-YLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGW-NGLPQER-LGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            +PNFS        +RS P   ++ + YLSELLAE  KL PF  VLP   RL+ QEI RV+ ++ N       + R   PSP+AS  +  N +   + GW +  P ER +   P    +W ++P S S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KED +RG+PGYEHLN+PLHIL+EA+LP  IVD RL QA+EI+++LL  V+E+ D+ K+QQ RE+A+LN
Sbjct:   41 SPNFSGG------LRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSPAP--NWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLN 279          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.747e-63
Identity = 132/251 (52.59%), Postives = 170/251 (67.73%), Query Frame = 3
Query:  102 NPNFSPARAASPQIRSTPDINIDSQ-YLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGW-NGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            +PN+S        +RS   + ++ + YLSELLAE  KL PF  VLP   RLL QEI RV+ ++ N        L H  PSP+AS  +  N A   + GW +  P ER   P     +W ++P S S    KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE+ +RG+PGYEHLN+PLHIL+EA+LP  IVD RL QA+EI+++LL  ++E+ D  K+QQ RE+A+LN
Sbjct:   45 SPNYSGG------LRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSER-SVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLN 285          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.437e-56
Identity = 120/249 (48.19%), Postives = 156/249 (62.65%), Query Frame = 3
Query:  129 ASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQER---------LGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            ASP     P  + + +YL+ELL E QKLGPF QV+P C RLL  EI RVS       F D DR  H SP           +    L GW+ +  E            GP    + W   P  P+   VK+++RL++PVD YP++NFVGR+LGPRGNSLKRVE  T CRV+IRG+GS+KD  KE+KL+G+PGYEHL +PLH+LIEA+LP +I++ RL  A   +E LLK +DES D+ KR+Q +E+A LN
Sbjct:   30 ASPNRSPCPPSDRE-RYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVSS------FPDLDRYEHGSPFRSLGQPTNGKL---DLEGWSMMQAEENCHLQRASPFRGPS--PVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAALN 266          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.914e-28
Identity = 56/117 (47.86%), Postives = 87/117 (74.36%), Query Frame = 3
Query:  498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL    E +D +K+ Q  E+A+LN
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILN 201          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.914e-28
Identity = 56/117 (47.86%), Postives = 87/117 (74.36%), Query Frame = 3
Query:  498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL    E +D +K+ Q  E+A+LN
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILN 201          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.914e-28
Identity = 56/117 (47.86%), Postives = 87/117 (74.36%), Query Frame = 3
Query:  498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL    E +D +K+ Q  E+A+LN
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILN 201          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.914e-28
Identity = 56/117 (47.86%), Postives = 87/117 (74.36%), Query Frame = 3
Query:  498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL    E +D +K+ Q  E+A+LN
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILN 201          
BLAST of EY661488 vs. ExPASy Swiss-Prot
Match: QKI_HORSE (Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.914e-28
Identity = 56/117 (47.86%), Postives = 87/117 (74.36%), Query Frame = 3
Query:  498 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKTVDESQDYIKRQQXREVAMLN 848
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL    E +D +K+ Q  E+A+LN
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILN 201          
The following BLAST results are available for this feature:
BLAST of EY661488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
QKIL3_ARATH6.493e-12487.11KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKIL4_ARATH4.653e-12283.92KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIL1_ARATH3.389e-6452.78KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL2_ARATH3.747e-6352.59KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKIL5_ARATH4.437e-5648.19KH domain-containing protein At1g09660 OS=Arabidop... [more]
QKI_RAT3.914e-2847.86Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_PIG3.914e-2847.86Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1[more]
QKI_MOUSE3.914e-2847.86Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1[more]
QKI_HUMAN3.914e-2847.86Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
QKI_HORSE3.914e-2847.86Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-F11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661488 ID=EY661488; Name=EY661488; organism=Citrus sinensis; type=EST; length=897bp
CACGCGTCCGCCCTTTTCCTTTCTTTAAGAATCCCATTCTTTTGTTTGTT
CTAAATCCTCTAAAAAAGCAAGACAGTCACAAAGCCATGTCAGGTTTGTA
TAATCCCAACTTCTCACCTGCAAGAGCTGCTTCTCCACAAATTAGAAGCA
CCCCAGATATTAATATTGACAGTCAATACTTGTCAGAGCTTTTAGCTGAG
CATCAAAAGCTAGGACCTTTCACACAGGTGCTTCCGATATGCAGCCGACT
GTTAACTCAAGAGATATTTCGGGTTTCTGGGATGATGCCCAATCAAGGAT
TTGGTGACTTTGACAGACTGCGGCATAGAAGCCCCAGCCCCATGGCTTCT
TCAAATCTTATGTCAAACGTTGCAGGTACAGGGTTAGGTGGCTGGAATGG
CCTACCTCAGGAGAGATTAGGTGGACCTCCTGGCATGACGATGGATTGGC
AAAGTGCACCTGCAAGCCCTAGTTCATATACAGTCAAGAGAATTTTGCGT
TTGGAAATTCCAGTGGATACTTATCCTAACTTCAATTTTGTTGGACGGCT
TCTTGGTCCAAGGGGCAATTCACTGAAACGGGTTGAAGCTACTACTGGCT
GCCGTGTGTACATTAGAGGGAAGGGCTCAATAAAGGATCCAGACAAGGAA
GATAAGCTAAGGGGAAGGCCAGGCTATGAGCATCTCAATGATCCACTTCA
CATCTTAATTGAGGCTGATTTACCTGCCAACATTGTTGATATCAGGCTGA
GACAGGCGCAGGAGATTATAGAAGAATTGCTGAAAACTGTGGATGAGTCA
CAAGATTATATTAAGAGGCAGCAGNTGCGTGAAGTGGCAATGCTGAATCA
AATTTCAGAGAAGATAGCCGGGGCCAAGTGCCAGTGTTTCTTCCGTC
back to top