EY661447

Overview
NameEY661447
Unique NameEY661447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12928 contig Csv1_Contig12928:881..1823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY661447 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.955e-33
Identity = 91/201 (45.27%), Postives = 119/201 (59.20%), Query Frame = 1
Query:  211 KSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWS----PNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYVDYLGFLC----TTPGIDIHEIRNYTNQPC-NYSMGHPNNFNTPSITV 786
            K +P VA FS+RGPN         ++LKPD++APG  I AAW+    P G    +   E F +ISGTSM+ PH++G+AAL+K  HP WSPAAI+SALMTT  K  +  +PL        +      +TPFD+G+GHV+P  A +PGLI+D    DYLGFLC    T+P I     RNYT  P  +YS+    + N PS  V
Sbjct:  481 KPSPVVAAFSSRGPNSIT-----PNILKPDLIAPGVNILAAWTGAAGPTGLASDSRRVE-FNIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSALMTTAYKTYKDGKPL-------LDIATGKPSTPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSVSRRNYTCDPSKSYSVA---DLNYPSFAV 665          
BLAST of EY661447 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.219e-28
Identity = 92/231 (39.83%), Postives = 119/231 (51.52%), Query Frame = 1
Query:   61 GIPGILITDVTKSMDLVDYYNTSTT----RDWTGRVK---SFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAW---SPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYVDYLGFLCTTPGIDIHEIRNYT 723
            G  G+L+T  T+  D  D Y   ++     D    ++   S +  G        IL+ SAP V  FS+RGPN         D++KPDI  PG  I AAW   +P G    N +   F +ISGTSM+ PHI GIA  VK  +P WSPAAIKSALMTT + ++    P QA+               F YGSGHVNP  A+ PGL++DA   DY+ FLC   G +   +R  T
Sbjct:  412 GAAGVLMTSNTR--DYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRAT-----KDVIKPDISGPGVEILAAWPSVAPVGGIRRNTL---FNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNP-QAE---------------FAYGSGHVNPLKAVRPGLVYDANESDYVKFLC-GQGYNTQAVRRIT 615          
BLAST of EY661447 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.304e-24
Identity = 69/159 (43.40%), Postives = 90/159 (56.60%), Query Frame = 1
Query:  217 APQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAW----SPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYVDYLGFLC 681
            AP VA FS+RGPN          LLKPDI APG  I AA+    S  G D      + F ++SGTSMA PH+AG+AA VK  HP W+PAAIKSA++T       +++P+  +   + E         F YG G +NPR A  PGL++D   + Y+ FLC
Sbjct:  477 APFVASFSSRGPNPGSIR-----LLKPDIAAPGIDILAAFTLKRSLTGLDGDTQFSK-FTILSGTSMACPHVAGVAAYVKSFHPDWTPAAIKSAIIT-------SAKPISRRVNKDAE---------FAYGGGQINPRRAASPGLVYDMDDISYVQFLC 613          
The following BLAST results are available for this feature:
BLAST of EY661447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH1.955e-3345.27Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME4.219e-2839.83Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH6.304e-2443.40Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-033-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661447 ID=EY661447; Name=EY661447; organism=Citrus sinensis; type=EST; length=943bp
TTCGTCGACCCACGCGTCCGAAATGTTTCCCCACGAACAAAATTTGATCC
TGTTCCAGTTGGTATTCCTGGGATACTTATCACAGATGTCACGAAGTCAA
TGGATCTTGTAGACTACTACAACACCTCTACAACAAGAGACTGGACTGGA
CGAGTGAAAAGTTTTAAAGGTACAGGTACCATAGGAGATGGTTTGATGCC
TATTCTCCATAAATCAGCACCGCAGGTGGCATTATTTTCTGCTCGAGGGC
CCAATATAAAAGATTTCAGCTTCCAAGATGCAGATCTTCTCAAGCCAGAC
ATTCTGGCTCCTGGCTCTCTCATTTGGGCCGCTTGGTCTCCAAATGGAAC
AGATGAAGCTAATTTTGTGGGAGAAGGATTTGCCTTGATATCTGGAACCA
GTATGGCTGCACCACATATAGCCGGGATAGCTGCTCTTGTGAAGCAGAAG
CACCCTTATTGGAGCCCAGCTGCTATAAAATCAGCATTGATGACCACAAC
AACGAAGTTGGACAGAGCAAGTAGGCCTCTTCAAGCACAACAATATTCTG
AAACAGAAGCCATGAAGCTGGTTACAGCTACACCATTTGACTATGGGAGT
GGCCATGTCAATCCAAGAGCTGCCTTGGATCCTGGACTCATATTTGATGC
AGGTTACGTGGATTACTTGGGATTCTTGTGCACGACTCCCGGCATAGACA
TTCACGAGATTAGAAACTACACAAACCAACCCTGCAACTACTCAATGGGG
CACCCGAATAATTTCAATACTCCGTCAATCACAGTCGCCCATCTTGTGAG
GACTCCAGTAGTTACACGAACAGTCACCAATGTTGCCGAAGAAGAAACCT
ACTTCATGTCCGCCAGGATGCACCAAGCCATGCCATTGAAAGTCACCCCT
CAGCCATGATCTGAAACCTGTTGCTTCCCGAAGTTCCTGGGAC
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