EY661164

Overview
NameEY661164
Unique NameEY661164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY661164_ssr33 microsatellite EY661164_ssr33:33..62. BLAST: Citrus ESTs to Prunus persica proteins V1
EY661164_ssr67 microsatellite EY661164_ssr67:67..87. BLAST: Citrus ESTs to Prunus persica proteins V1
EY661164_ssr138 microsatellite EY661164_ssr138:138..149. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7970 contig Csv1_Contig7970:32..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 4.191e-49
Identity = 83/119 (69.75%), Postives = 99/119 (83.19%), Query Frame = 2
Query:  185 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVF 541
            N+EGDAL AL+ SL+DP+ VLQSWD TLV PCTWFH+TCN DN VTR+DLGN+NLSG+LV +LG+L +LQYLELY NNI GTIP +LGNL  L+SLDLY NN+SG IP +L +LK L F
Sbjct:   26 NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRF 144          

HSP 2 Score: 39.6614 bits (91), Expect = 4.191e-49
Identity = 18/44 (40.91%), Postives = 28/44 (63.64%), Query Frame = 3
Query:  567 TGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFEN 698
            +G+IPR L  + +L+V+D+S+N L G IP +G F      +F N
Sbjct:  153 SGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFAN 196          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.903e-43
Identity = 80/119 (67.23%), Postives = 100/119 (84.03%), Query Frame = 2
Query:  185 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVF 541
            N EGDAL++LR +L DP+NVLQSWDPTLVNPCTWFH+TCN +N V R+DLGN++LSG+LVP+LG+L++LQYLELY NNI G +P +LGNL +L+SLDLY N+ +G IP SL KL  L F
Sbjct:   30 NMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRF 148          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 9.016e-43
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 2
Query:  185 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVF 541
            N EGDAL+ LR +L DP+NVLQSWDPTLVNPCTWFH+TCN +N V R+DLGN+ LSG LVPELG L++LQYLELY NNI G IP  LGNL +L+SLDLY N+ SG IP SL KL  L F
Sbjct:   27 NLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRF 145          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.455e-40
Identity = 83/122 (68.03%), Postives = 96/122 (78.69%), Query Frame = 2
Query:  185 NSEGDALYALRRSLSDPD---NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVF 541
            N+EGDAL  L+ SLS  D   NVLQSWD TLV PCTWFH+TCN +N+VTR+DLGN+ LSG+LVPELG+L +LQYLELY NNI G IP ELG+L  L+SLDLY N+ISG IP SL KL  L F
Sbjct:   30 NAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRF 151          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.792e-36
Identity = 76/118 (64.41%), Postives = 90/118 (76.27%), Query Frame = 2
Query:  197 DALYALRRSLSDPD---NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVF 541
            DAL ALR SLS  D   N+LQSW+ T V PC+WFH+TCN +N VTRLDLG++NLSG LVP+L +L +LQYLEL+ NNI G IP ELG+L  L+SLDL+ NNISG IP SL KL  L F
Sbjct:   29 DALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRF 146          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.224e-23
Identity = 59/130 (45.38%), Postives = 77/130 (59.23%), Query Frame = 2
Query:  185 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFFAA*R*SANWT 574
            +++GDAL+ALR SL    N L  W+   VNPCTW  + C+  N VT L L + N SG L   +G LE+L+ L L  N I G IP + GNL SL SLDL +N ++G+IP ++  LK L F    R   N T
Sbjct:   28 DAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGT 157          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.190e-20
Identity = 48/117 (41.03%), Postives = 64/117 (54.70%), Query Frame = 2
Query:  185 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL 535
            N E  AL +++  + D   VL  WD   V+PCTW  + C+ +  V  L++ +  LSG L   +G+L HL  L L  N + G IP ELG L  L +LDL  N  SG+IP SL  L  L
Sbjct:   37 NYEVAALMSVKNKMKDEKEVLSGWDINSVDPCTWNMVGCSSEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHL 153          

HSP 2 Score: 30.0314 bits (66), Expect = 1.190e-20
Identity = 12/29 (41.38%), Postives = 19/29 (65.52%), Query Frame = 3
Query:  567 TGQIPRELVGISSLKVVDVSSNDLCGTIP 653
            +GQ+P  + G+S L  +D+S N+L G  P
Sbjct:  164 SGQVPHLVAGLSGLSFLDLSFNNLSGPTP 192          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.829e-19
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 2
Query:  185 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVF 541
            N E +AL  ++  L DP  V ++WD   V+PC+W  I+C+ DN V  L   + +LSG L   +G L +L+ + L  NNI G IP E+ +L  L +LDL NN  SG+IP S+ +L +L +
Sbjct:   32 NPEVEALINIKNELHDPHGVFKNWDEFSVDPCSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQY 150          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.348e-18
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  191 EGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCN-QDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL 535
            +G+AL + R +++  D+ +  W P   +PC W  +TC+ +  RV  L+L    + G L P++GKL+HL+ L L+ N + G IP  LGN  +L  + L +N  +G IP  +  L  L
Sbjct:   33 DGEALLSFRNAVTRSDSFIHQWRPEDPDPCNWNGVTCDAKTKRVITLNLTYHKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGL 148          

HSP 2 Score: 30.8018 bits (68), Expect = 1.348e-18
Identity = 18/50 (36.00%), Postives = 24/50 (48.00%), Query Frame = 3
Query:  567 TGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEG 716
            +G IP  L  +  L   +VS+N L G IP+ G       N+F  N  L G
Sbjct:  159 SGPIPASLGQLKKLSNFNVSNNFLVGQIPSDGVLSGFSKNSFIGNLNLCG 208          
BLAST of EY661164 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18
Identity = 52/120 (43.33%), Postives = 68/120 (56.67%), Query Frame = 2
Query:  185 NSEGDALYALRRSLSD-PDNVLQSW--DPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL 535
            NS+G  L +L + L   P  V  +W  + +   PC WF ITC+    V  L+   S +SG+L PE+G+L+ LQ L+L  NN  GTIP  LGN   L +LDL  N  S KIP +L  LK L
Sbjct:   30 NSDGLTLLSLLKHLDRVPPQVTSTWKINASEATPCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRL 149          
The following BLAST results are available for this feature:
BLAST of EY661164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
BAK1_ARATH4.191e-4969.75BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK2_ARATH6.903e-4367.23Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH9.016e-4369.75Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK4_ARATH2.455e-4068.03Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK5_ARATH4.792e-3664.41Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y5129_ARATH1.224e-2345.38Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.190e-2041.03Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH1.829e-1941.18Probable LRR receptor-like serine/threonine-protei... [more]
FEI1_ARATH1.348e-1835.34LRR receptor-like serine/threonine-protein kinase ... [more]
PEPR1_ARATH2.023e-1843.33Leucine-rich repeat receptor-like protein kinase P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-030-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661164 ID=EY661164; Name=EY661164; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGCTCTTTGACACCACAAACCCTAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGCCATGGCGGCGGCGGCGGCGGCGGCGGAAGCGGCAGTG
CAGTGGTTGAGTGTGTGTATAACGTTCAGCATAAGCCTAATAATAATAAT
AGGGAGCAGCAGCTTGGTGGCGGTGGCGAGTGGAAACTCGGAAGGGGACG
CGCTGTACGCGCTCAGGAGAAGCTTATCAGATCCCGATAACGTGCTTCAG
AGCTGGGATCCAACTCTCGTCAATCCCTGCACTTGGTTTCACATAACCTG
TAATCAGGACAACCGCGTTACTCGACTGGATTTGGGTAATTCAAATCTAT
CCGGCCGTCTCGTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATACCTG
GAACTTTACAAAAACAACATCCAAGGAACTATCCCTGTCGAGCTCGGTAA
CTTGAAGAGCCTCATCAGCTTGGACTTGTATAATAACAACATCTCGGGGA
AAATCCCTCCTTCCTTGGCTAAATTGAAATCTCTTGTTTTTTTTGCGGCT
TAACGATAATCGGCTAACTGGACAAATTCCCAGGGAACTTGTTGGAATTT
CAAGTCTCAAAGTTGTGGATGTTTCAAGCAATGATCTGTGTGGAACAATT
CCTACAAGCGGACCATTTGAACACATCCCACTCAACAACTTTGAGAATAA
CCCTCGATTAGAAGGTCCAGAGTTGCTGGGACTTGCAAGTTATGACACAA
ACTGCTCATAAACGATTGATTGNTGCTTTCAGCTCTACTCANGTTTCGAA
TAGATGTGTCCGCGAAGATCGAAAGCGTCTTTACCTAAAAGCGTAGTGTT
ATTGGTGAATGAC
back to top