EY661149

Overview
NameEY661149
Unique NameEY661149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661149 vs. ExPASy Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.277e-52
Identity = 115/183 (62.84%), Postives = 129/183 (70.49%), Query Frame = 3
Query:  120 MVSPENTNWLLDYPLIDDITVPDGNFSVSASGFTWTVQPPINGPSNGCVEIDSAFGDSNGLXXXXXXXXXXXXXXXXXX-KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKAMST-QPSF 662
            MVSPEN NW+ D  LID      G+F++   GF+W VQ PI   SN    +D + G+S                      KACREK RRDRLNDKF+EL +ILEPG PPKTDKAAIL+DAVRMVTQLR EAQKLKDSNSSLQ+KIKELK EKNELRDEKQRLK EKEK+EQQLKAM+  QPSF
Sbjct:    1 MVSPENANWICD--LID---ADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSF 178          
BLAST of EY661149 vs. ExPASy Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.139e-47
Identity = 106/180 (58.89%), Postives = 121/180 (67.22%), Query Frame = 3
Query:  120 MVSPENTNWLLDYPLIDDITVPDGNFSVSASGFTWTVQPPINGPSNGCVEIDSAFGDSNGLXXXXXXXXXXXXXXXXXX-KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKAMSTQP 656
            MVSPENTNWL DYPLI+      G FS     F W     I+G +   VE+D    D++ +                   KACREK RRDRLNDKF EL+S+LEPGR PKTDK AI+ DA+RMV Q R EAQKLKD NSSLQEKIKELK EKNELRDEKQ+LK EKE+I+QQLKA+ TQP
Sbjct:    1 MVSPENTNWLSDYPLIE------GAFSDQNPTFPWQ----IDGSATVSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQP 170          
BLAST of EY661149 vs. ExPASy Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.579e-32
Identity = 69/104 (66.35%), Postives = 88/104 (84.62%), Query Frame = 3
Query:  357 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKAMST-QPSFL 665
            KACREKLRR++LNDKF++L+S+LEPGR PKTDK+AIL DA+R+V QLR EA +L+++N  L E+IK LKA+KNELR+EK  LKAEKEK+EQQLK+M    P F+
Sbjct:  167 KACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFM 270          
BLAST of EY661149 vs. ExPASy Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.795e-30
Identity = 67/101 (66.34%), Postives = 86/101 (85.15%), Query Frame = 3
Query:  357 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKAMSTQPS 659
            KACRE+LRR++LN++F++L+S+LEPGR PKTDK AIL DA+R++ QLR EA KL+++N  L E+IK LKAEKNELR+EK  LKA+KEK EQQLK+M T PS
Sbjct:  135 KACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSM-TAPS 234          
BLAST of EY661149 vs. ExPASy Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.585e-18
Identity = 49/101 (48.51%), Postives = 73/101 (72.28%), Query Frame = 3
Query:  357 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKI----EQQLKAMS 647
            KA REKLRR++LN+ FVEL ++L+P RP K DKA IL D V+++ +L SE  KLK   ++L ++ +EL  EKN+LR+EK  LK++ E +    +Q+L++MS
Sbjct:   63 KAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMS 162          
BLAST of EY661149 vs. ExPASy Swiss-Prot
Match: BH011_ARATH (Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 40/92 (43.48%), Postives = 65/92 (70.65%), Query Frame = 3
Query:  357 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQ 632
            KA REKLRRD+L ++F+EL + L+P RP K+DKA++L D ++M+  + ++  +LK    +L ++ +EL  EK+ELR+EK  LK++ E +  Q
Sbjct:   49 KAEREKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQESRELIQEKSELREEKATLKSDIEILNAQ 139          
BLAST of EY661149 vs. ExPASy Swiss-Prot
Match: BH047_ARATH (Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 3
Query:  357 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKAMSTQ--PSFLTXXXXXXXXXXXQXQHLKXADAFISYP 746
            KA RE+L+R+ LN+ F+ELA  LE  +   + KA+IL +A R +  +  + + L+  ++SL  +   +  EKNEL++E   L+ E  K++ +++A + Q  P   T           Q QH +    F   P
Sbjct:   32 KAVRERLKREHLNELFIELADTLELNQ-QNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEARANQSKPDLNTSPAPEYHHHHYQQQHPERVSQFPGLP 162          
The following BLAST results are available for this feature:
BLAST of EY661149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ILR3_ARATH1.277e-5262.84Transcription factor ILR3 OS=Arabidopsis thaliana ... [more]
BH115_ARATH6.139e-4758.89Transcription factor bHLH115 OS=Arabidopsis thalia... [more]
BH034_ARATH5.579e-3266.35Transcription factor bHLH34 OS=Arabidopsis thalian... [more]
BH104_ARATH1.795e-3066.34Transcription factor bHLH104 OS=Arabidopsis thalia... [more]
BH121_ARATH4.585e-1848.51Transcription factor bHLH121 OS=Arabidopsis thalia... [more]
BH011_ARATH1.803e-1443.48Transcription factor bHLH11 OS=Arabidopsis thalian... [more]
BH047_ARATH9.260e-1131.06Transcription factor bHLH47 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-030-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661149 ID=EY661149; Name=EY661149; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGCACGCAGATTCCCCATTCTCCTCTTTCTTCGAAACTCAA
CCGCTGTTTGTTTCCCAGGAAAATTTCTCTCCGCCGGAAAACCCATAAAT
ACTATCCTGGAAATTCAAAATGGTTTCTCCGGAAAATACGAATTGGCTAT
TAGATTACCCCTTGATCGACGATATCACTGTCCCTGATGGCAATTTCTCC
GTTTCCGCTTCGGGTTTCACTTGGACCGTTCAGCCGCCAATTAACGGGCC
GTCAAATGGCTGTGTGGAAATTGATTCTGCATTTGGGGATTCAAATGGTC
TCAAGGAAAGCTCAAAAAAGAGGGTTAGATCAGAATCATGTGGGTCTTCT
AGCTCCAAGGCGTGCAGGGAAAAGTTGCGTAGGGATCGTCTTAATGACAA
GTTTGTGGAGTTAGCCTCTATCTTAGAGCCTGGAAGGCCCCCCAAAACAG
ATAAGGCAGCTATTCTGATTGATGCCGTCCGGATGGTGACTCAATTACGC
AGTGAAGCCCAGAAGTTGAAGGACTCAAATTCAAGTCTCCAGGAGAAGAT
CAAAGAGTTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGCAGAGGC
TAAAGGCAGAGAAAGAGAAGATAGAGCAGCAACTCAAAGCTATGAGCACA
CAACCCAGTTTCTTAACTCCTCCTCCTGCAANTCCTGCTGCATTTGCTGC
CCAGGNNCAGCACCTGAAANCAGCTGATGCCTTCATCAGCTACCCTGGAG
TCGCATGTGGCAATCATGCCTTCTGCTGCATGGATACCTCCAAGANCATG
TACTCCGCCCTCCGTTGCCTAATATGCAACTTACATGATTTGGGTTTGCA
ATTGCACCCAACAAGGGATCCGT
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