EY661147

Overview
NameEY661147
Unique NameEY661147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX3_MEDTR (Auxin transporter-like protein 3 OS=Medicago truncatula GN=LAX3 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.894e-74
Identity = 153/263 (58.17%), Postives = 176/263 (66.92%), Query Frame = 1
Query:  100 MASEKVETVVAGNYIEMEREEEDXXXXXXXXXXFFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAV--FKAL**PPFTA--LVSHNCLHFCLDRGEGEKPLRPTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPR 876
            M SEKVETVVAGNY+EMEREEE           FFWHGGSVYDAWFSCASNQVAQVLLTLPY                   MGSWTAY+IS+LYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRN+GLFFNCTFLLFGS IQLIACASNIYYIND+L ++    +++       VFIP F    N  +  F  L    +TA  +   + LH    + E  K   PTK+ LYFTG+  +  T GG++  +E   A+W P+
Sbjct:    1 MTSEKVETVVAGNYLEMEREEEGSKSTTGKLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDHLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFLGLVMTTYTAWYMTIASILH---GQAEDVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQ 256          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX3_ARATH (Auxin transporter-like protein 3 OS=Arabidopsis thaliana GN=LAX3 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 5.263e-71
Identity = 151/274 (55.11%), Postives = 175/274 (63.87%), Query Frame = 1
Query:  100 MASEKVETVVAGNYIEMEREEEDXXXXXXXXXX-----FFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAV--FKAL**PPFTA--LVSHNCLHFCLDRGEGEKPLRPTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPRNINPFH 894
            MA+EK+ETVVAGNY+EMEREEE+               FFWHGGSVYDAWFSCASNQVAQVLLTLPY                   MGSWTAYLIS+LYVEYRTRKEREK DFRNHVIQWFEVLDGLLGKHWRN+GL FNCTFLLFGS IQLIACASNIYYIND L ++    +++       VFIP F    N  +  F  L    +T+  L   + LH    + E  K   PT M LYFTG+  +  T GG++  +E   A+W P+     +
Sbjct:    1 MAAEKIETVVAGNYLEMEREEENISGNKKSSTKTKLSNFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMMSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKFDFRNHVIQWFEVLDGLLGKHWRNLGLIFNCTFLLFGSVIQLIACASNIYYINDKLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFLGLAMTTYTSWYLTIASLLH---GQAEDVKHSGPTTMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIY 267          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.610e-67
Identity = 145/270 (53.70%), Postives = 171/270 (63.33%), Query Frame = 1
Query:  100 MASEKV-ETVVAGNYIEMEREEEDXXXXXXXXXXFFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAV--FKAL**PPFTA--LVSHNCLHFCLDRGEGEKPLRPTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPRNINPFH 894
            MA++KV ETV+ GNY+EME E +           F WHGGS YDAWFSCASNQVAQVLLTLPY                   +GSWTAYLISILYVEYRTRKEREKV+FR+HVIQWFEVLDGLLGKHWRN+GL FNCTFLLFGS IQLIACASNIYYINDNL ++    +++       VFIP F    N  +  F  L    +TA  L     LH    + EG K   P K+ LYFTG+  +  T GG++  +E   A+W P+     +
Sbjct:    3 MANDKVAETVIVGNYVEMESEGKPPQDIKSKLSNFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRSHVIQWFEVLDGLLGKHWRNVGLGFNCTFLLFGSVIQLIACASNIYYINDNLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFLGLVMTTYTAWYLTIAAVLH---GQVEGVKHSGPNKIILYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIY 265          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.988e-66
Identity = 142/263 (53.99%), Postives = 168/263 (63.88%), Query Frame = 1
Query:  118 ETVVAGNYIEMEREEEDXXXXXXXXXXFFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAV--FKAL**PPFTA--LVSHNCLHFCLDRGEGEKPLRPTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPRNINPFH 894
            ETVV GNY+EME++ +            FWHGGS YDAWFSCASNQVAQVLLTLPY                   +GSWTAYLISILYVEYRTRKEREKV+FRNHVIQWFEVLDGLLGKHWRN+GL FNCTFLLFGS IQLIACASNIYYINDNL ++    +++       VFIP F    N  +  F  L    +TA  L   + LH    + EG K   P+K+ LYFTG+  +  T GG++  +E   A+W P+     +
Sbjct:    9 ETVVVGNYVEMEKDGK-ALDIKSKLSDMFWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFLGLLMTTYTAWYLTIASILH---GQVEGVKHSGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIY 263          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX4_ORYSJ (Putative auxin transporter-like protein 4 OS=Oryza sativa subsp. japonica GN=Os11g0169200 PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.658e-66
Identity = 146/277 (52.71%), Postives = 168/277 (60.65%), Query Frame = 1
Query:  100 MASEKVETVVAGNYIEMERE--------------EEDXXXXXXXXXXFFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAV--FKAL**PPFTA--LVSHNCLHFCLDRGEGEKPLRPTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPR 876
            MASEKVET+VAGNY+EMERE                            FWHGGSVYDAWFSCASNQVAQVLLTLPY                   MGSWTAYLIS+LYVEYRTR+ER+KVDFRNHVIQWFEVLDGLLG+HWRN GL FNCTFLLFGS IQLIACASNIYYIND L ++    +++       VF+P F    N  V  F  L    +TA  L     +H  +D G   +      M LYFTG+  +  T GG++  +E   A+W PR
Sbjct:    1 MASEKVETIVAGNYVEMEREGAATAGEGVGGAAAASGRRRGKLAVSSLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISVLYVEYRTRRERDKVDFRNHVIQWFEVLDGLLGRHWRNAGLLFNCTFLLFGSVIQLIACASNIYYINDRLDKRTW-TYIFGACCATTVFVPSF---HNYRVWSFLGLLMTSYTAWYLTVAAVVHGKVD-GAAPRAGPSKTMVLYFTGATNILYTFGGHAVTVEIMHAMWRPR 272          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX3_ORYSJ (Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0147400 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.756e-58
Identity = 124/234 (52.99%), Postives = 150/234 (64.10%), Query Frame = 1
Query:  205 WHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAV--FKAL**PPFTA--LVSHNCLHFCLDRGEGEKPLRPTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPRNINPFH 894
            WHGGS YDAWFSCASNQVAQVLLTLPY                   +GSWTAYLISILY+EYRTRKER+KVDFRNHVIQWFEVLDGLLG+HWRN+GL FNCTFLLFGS IQLI CASNIYYIND+L ++    +++       VFIP F    N  +  F  L    +TA  +   + +H    + EG     PT + LYFTG+  +  T GG++  +E   A+W P+     +
Sbjct:   58 WHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYGLLGSWTAYLISILYLEYRTRKERDKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQLIGCASNIYYINDHLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFLGLLMTTYTAWYIAVASLIH---GQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIY 284          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: AUX1_ARATH (Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.536e-57
Identity = 132/270 (48.89%), Postives = 161/270 (59.63%), Query Frame = 1
Query:  106 SEKVETVVA---------GNYIEMEREEEDXXXXXXXXXXFFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAV--FKAL**PPFTA--LVSHNCLHFCLDRGEGEKPLRPTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPR 876
            SE VE +VA         GN    + EE D          F WHGGSV+DAWFSCASNQVAQVLLTLPY                   +GSWTAYLIS+LYVEYR RKE+E   F+NHVIQWFEVLDGLLG +W+ +GL FNCTFLLFGS IQLIACASNIYYIND+L ++    +++       VFIP F    N  +  F  L    +TA  L   + +H    + EG K   PTK+ LYFTG+  +  T GG++  +E   A+W P+
Sbjct:    2 SEGVEAIVANDNGTDQVNGNRTGKDNEEHDGSTGSNLSN-FLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLYVEYRARKEKEGKSFKNHVIQWFEVLDGLLGSYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFLGLGMTTYTAWYLAIASIIH---GQAEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQ 263          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX1_MEDTR (Auxin transporter-like protein 1 OS=Medicago truncatula GN=LAX1 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.649e-57
Identity = 124/257 (48.25%), Postives = 154/257 (59.92%), Query Frame = 1
Query:  151 EREEEDXXXXXXXXXXFFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAVFKAL**PPFTALVSHNCLHFCLDRGEGEKPLR--PTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPRNINPFHWWNPFFL 915
            EREEE           F WHGGSVYDAWFSCASNQVAQVLLTLPY                   MGSWTAYLISILYVEYR+RKE+E V F+NHVIQWFEVL+GLLG +W+ IGL FNCTFLLFGS IQLIACASNIYYIND+L ++    +++       VFIP F    N  ++  L     T   +       +  G+ E  +   P KM  YFTG+  +  T GG++  +E   A+W P+     +++   ++
Sbjct:   24 EREEEKGASPGSGFKNFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISILYVEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFL-GLGMTTYTAWYMTIAAIVHGQVENVVHSGPKKMVWYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYFFATLYV 275          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX2_MEDTR (Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.246e-56
Identity = 122/243 (50.21%), Postives = 151/243 (62.14%), Query Frame = 1
Query:  160 EEDXXXXXXXXXXFFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAV--FKAL**PPFTA--LVSHNCLHFCLDRGEGEKPLRPTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPR 876
            EE+          F WHGGSV+DAWFSCASNQVAQVLLTLPY                   +GSWTAYLIS+LYVEYR+RKE+E V+F+NHVIQWFEVLDGLLG +W+ +GL FNCTFLLFGS IQLIACASNIYYINDNL ++    +++       VFIP F    N  +  F  L    +TA  L   + +H    + E      P K+ LYFTG+  +  T GG++  +E   A+W P+
Sbjct:   28 EEEVEDHSFSVKNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYRSRKEKENVNFKNHVIQWFEVLDGLLGPYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFLGLGMTTYTAWYLTIASIVH---GQAENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQ 263          
BLAST of EY661147 vs. ExPASy Swiss-Prot
Match: LAX4_MEDTR (Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 4.048e-55
Identity = 117/228 (51.32%), Postives = 146/228 (64.04%), Query Frame = 1
Query:  199 FFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSEIQLIACASNIYYINDNLGQQNLDLHLWELVGRQPVFIPFFP*LQNLAVFKAL**PPFTALVSHNCLHFCLDRGEGEKPLR--PTKMGLYFTGSI*LPQTLGGNSCPLENPPALWNPR 876
            F WHGGSV+DAWFSCASNQVAQVLLTLPY                   +GSWTAYLIS+LYVEYR RKE+E V+F+NHVIQWFEVLDGLLG++W+ +GL FNCTFLLFGS IQLIACASNIYYIND L ++    +++       VFIP F    N  ++  L     T   +       +  G+ E  +   PTK+ LYFTG+  +  T GG++  +E   A+W P+
Sbjct:   41 FLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLIGSWTAYLISVLYVEYRARKEKENVNFKNHVIQWFEVLDGLLGRYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTW-TYIFGACCATTVFIPSF---HNYRIWSFL-GLGMTTYTAWYMAIAAIVNGQIENVVHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQ 263          
The following BLAST results are available for this feature:
BLAST of EY661147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LAX3_MEDTR3.894e-7458.17Auxin transporter-like protein 3 OS=Medicago trunc... [more]
LAX3_ARATH5.263e-7155.11Auxin transporter-like protein 3 OS=Arabidopsis th... [more]
LAX5_MEDTR4.610e-6753.70Auxin transporter-like protein 5 OS=Medicago trunc... [more]
LAX2_ARATH2.988e-6653.99Auxin transporter-like protein 2 OS=Arabidopsis th... [more]
LAX4_ORYSJ6.658e-6652.71Putative auxin transporter-like protein 4 OS=Oryza... [more]
LAX3_ORYSJ1.756e-5852.99Auxin transporter-like protein 3 OS=Oryza sativa s... [more]
AUX1_ARATH2.536e-5748.89Auxin transporter protein 1 OS=Arabidopsis thalian... [more]
LAX1_MEDTR5.649e-5748.25Auxin transporter-like protein 1 OS=Medicago trunc... [more]
LAX2_MEDTR6.246e-5650.21Auxin transporter-like protein 2 OS=Medicago trunc... [more]
LAX4_MEDTR4.048e-5551.32Auxin transporter-like protein 4 OS=Medicago trunc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-030-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661147 ID=EY661147; Name=EY661147; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGATTTTATTTTATCTATTTATAGATTCTCAAATTGCTTCA
TTGATCCCCCAACTTAATTGATCGGTATATACTTATAAGTGCTATAGCAA
TGGCGTCAGAGAAAGTTGAGACTGTTGTAGCTGGAAACTACATTGAAATG
GAAAGAGAAGAAGAGGATTCCAAGTCTTCCAAGAGCAAACTTTCAAGCTT
CTTTTGGCATGGTGGTTCAGTTTATGATGCATGGTTTAGCTGTGCTTCTA
ACCAGGTCGCACAAGTGCTACTCACACTGCCATATTCATTTTCACAACTT
GGGTTGTTATCTGGGATTCTACTTCAGCTGTTTTATGGGTTAATGGGAAG
CTGGACTGCTTATCTTATAAGCATACTTTATGTTGAGTACAGAACTAGAA
AGGAGAGAGAAAAGGTTGATTTCAGGAATCACGTAATTCAGTGGTTTGAA
GTTCTTGATGGGCTACTGGGGAAGCACTGGAGGAATATAGGCCTATTTTT
CAACTGCACTTTTCTGCTATTTGGATCCGAAATCCAGTTAATCGCCTGTG
CAAGCAACATATACTACATAAATGACAATTTGGGACAACAGAACTTGGAC
CTACATCTTTGGGAACTTGTTGGGCGACAACCTGTGTTCATCCCCTTCTT
TCCATAATTACAAAATTTGGCCGTTTTTAAGGCCTTATAATGACCTCCCT
TCACCGCATTGGTATCCCACAATTGCCTCCACTTCTGCTTGGACAGAGGT
GAGGGGGAGAAACCCCTCCGGCCAACCAAAATGGGTCTCTATTTTACAGG
AAGTATCTAACTTCCCCAAACCCTTGGGGGGAATTCCTGCCCCCTGGAAA
ATCCGCCTGCCTTGTGGAACCCCCGAAATATCAACCCATTTCACTGGTGG
AACCCTTTTTTTTTACCCCAACATTACCTCCACCCTCGGGGAAT
back to top