EY661121

Overview
NameEY661121
Unique NameEY661121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661121 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 4.732e-35
Identity = 74/215 (34.42%), Postives = 112/215 (52.09%), Query Frame = 1
Query:   13 EKGVLVSSSAGNAGPALGSLHNGIPWVLTVAAGTIDRSFAGITTLGSGETIIGWTMFPANALVER-LPLLYNESYS------ACNSTKLLSQLPTDAIIVCKEATGSVSKQISVVSASNMQGAIFVSD-YDPELFELGGLSIPGVVISTHDAPAVINYARNGVEPVASIKFQQTVLGTEHAPAVAFYTSRGPSPSYPGILKPDIMAPGSLVFAAW 633
            E+G+LVS SAGNAGP+  SL N  PW+ TV AGT+DR F  +  LG+G+   G ++F   AL ++ LP +Y  + S       C +  L+ +     I++C     +  ++  VV A+   G I  +   + E        +P   +       + +Y      P ASI    TV+G + +P VA ++SRGP+   P ILKPD++APG  + AAW
Sbjct:  303 ERGILVSCSAGNAGPSSSSLSNVAPWITTVGAGTLDRDFPALAILGNGKNFTGVSLFKGEALPDKLLPFIYAGNASNATNGNLCMTGTLIPEKVKGKIVMCDRGINARVQKGDVVKAAGGVGMILANTAANGEELVADAHLLPATTVGEKAGDIIRHYVTTDPNPTASISILGTVVGVKPSPVVAAFSSRGPNSITPNILKPDLIAPGVNILAAW 517          

HSP 2 Score: 43.1282 bits (100), Expect = 4.732e-35
Identity = 21/37 (56.76%), Postives = 29/37 (78.38%), Query Frame = 3
Query:  684 DYNMISGTSMACPHAAGVAALPRA-HTLMGAAAIRSA 791
            ++N+ISGTSM+CPH +G+AAL ++ H     AAIRSA
Sbjct:  534 EFNIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSA 570          
BLAST of EY661121 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.745e-24
Identity = 70/216 (32.41%), Postives = 107/216 (49.54%), Query Frame = 1
Query:   16 KGVLVSSSAGNAGPALGSLHNGIPWVLTVAAGTIDRSFAGITTLGSGETIIGWTMFPANALVERLPLL--------YNESYSA--CNSTKLLSQLPTDAIIVCKEATGSVSKQISVVSASNMQGAIFVSDYDPELFELGGLSIPGVVISTHDAPAVINYARNGVEPVASIKFQQTVLGTEHAPAVAFYTSRGPSPSYPGILKPDIMAPGSLVFAAW 633
            KG+L  +SAGN GP+ G++ N  PW+LTVAA  IDR+F     LG+G++  G  +   +   +  PL+         ++ Y A  C S  L  +     ++VC+   G V    S + +    GAI VSD   +  ++     P   +++     +  Y  +     AS   Q+T   T  AP VA ++SRGP+P    +LKPDI APG  + AA+
Sbjct:  303 KGILTVASAGNDGPSSGTVTNHEPWILTVAASGIDRTFKSKIDLGNGKSFSGMGISMFSPKAKSYPLVSGVDAAKNTDDKYLARYCFSDSLDRKKVKGKVMVCRMGGGGVE---STIKSYGGAGAIIVSDQYLDNAQI--FMAPATSVNSSVGDIIYRYINS--TRSASAVIQKTRQVTIPAPFVASFSSRGPNPGSIRLLKPDIAAPGIDILAAF 511          

HSP 2 Score: 40.0466 bits (92), Expect = 4.745e-24
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  681 SDYNMISGTSMACPHAAGVAALPRA-HTLMGAAAIRSA 791
            S + ++SGTSMACPH AGVAA  ++ H     AAI+SA
Sbjct:  527 SKFTILSGTSMACPHVAGVAAYVKSFHPDWTPAAIKSA 564          
BLAST of EY661121 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.960e-16
Identity = 63/217 (29.03%), Postives = 102/217 (47.00%), Query Frame = 1
Query:   13 EKGVLVSSSAGNAGPALGSLHNGIPWVLTVAAGTIDRSFAGITTLGSGETIIGWTMFPANALVERLPLLYNESYSACNSTKLLSQLPTD----------AIIVCKEATGSVSKQISVVSASNMQGAIFVSDYDPELFELGGLSIPGVVISTHDAPAVINYARNGVEPVASIKFQQTVLGTEHAPAVAFYTSRGPSPSYPGILKPDIMAPGSLVFAAW 633
            E+G+L S+SAGN GP   +  +  PW+L+VAA T+DR F     +G+G++  G ++   +   +  PL+           K  S+  TD           I+VC+ + G      S+  A+ +       DY           +P  V+  +D  A + Y  +   P A+I F+ T +    AP V  ++SRGP+ +   ++KPDI  PG  + AAW
Sbjct:  296 ERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFDN--QYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDY------ADSYPLPSSVLDPNDLLATLRYIYSIRSPGATI-FKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAW 503          
The following BLAST results are available for this feature:
BLAST of EY661121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH4.732e-3534.42Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
XSP1_ARATH4.745e-2432.41Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
CUCM1_CUCME1.960e-1629.03Cucumisin OS=Cucumis melo PE=1 SV=1[more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-029-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661121 ID=EY661121; Name=EY661121; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGGGAGAAGGGCGTGCTGGTCTCTTCTTCAGCAGGAAATGC
AGGGCCAGCGTTAGGGAGCTTGCACAATGGAATCCCATGGGTGTTAACTG
TTGCAGCTGGAACCATTGACCGTTCATTTGCGGGCATAACAACTCTTGGG
AGCGGGGAAACCATCATTGGATGGACCATGTTCCCAGCCAATGCTCTCGT
AGAACGCTTGCCATTGCTATATAACGAGAGTTACTCAGCATGTAATTCAA
CTAAATTATTATCTCAATTACCAACAGATGCCATCATCGTATGCAAAGAA
GCTACAGGTTCGGTATCTAAGCAAATATCTGTTGTTAGTGCATCAAACAT
GCAGGGAGCTATATTTGTTTCAGATTATGATCCTGAATTATTTGAACTTG
GTGGTTTGAGTATACCTGGCGTGGTAATTAGCACCCATGATGCACCGGCT
GTCATCAACTATGCCAGAAATGGCGTGGAACCGGTGGCAAGCATCAAGTT
CCAGCAAACTGTTCTTGGCACAGAGCACGCACCAGCCGTGGCTTTCTATA
CTTCTAGAGGTCCTTCACCGAGCTATCCAGGCATCTTAAAGCCAGATATA
ATGGCCCCTGGGTCACTAGTTTTTGCTGCTTGGATTCCAATACTTCTACA
GCCCAAATTGGTTCAAATTTACTCTTGACAAGTGATTACAATATGATTTC
TGGGACATCAATGGCCTGCCCTCATGCTGCTGGTGTGGCTGCCCTCCCTA
GAGCGCACACCCTGATGGGTGCAGCTGCTATTAGGTCTGCAATNTGACTA
CAGCAAATCATTGGATACACNTACATCCCATCCGAGACATGTCTAATCAA
TTTACGTCTGCTTCACTCTAGCATGGGAGC
back to top