EY661114

Overview
NameEY661114
Unique NameEY661114
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661114 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.031e-52
Identity = 96/194 (49.48%), Postives = 125/194 (64.43%), Query Frame = 1
Query:  112 MGYGRLQPSSDPGGSSFREDQPGHATSAPQPXXXXXXXXXXXXXXXFALIIASAVSAVLLVGLKTRAVG---PTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASEQDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKREDVLTWLIATLTN 684
            MGY RL PS   G S+  +  P  ATS P+                 A+++   V   +  G++    G   P +  KPTQAISRTCSK+LYPNLC+ +LL+FPGSLTA E +L+HISFN TLQ FS+ALY +S I+Y QM P VRSA+D CLELLDDSVDAL+R+L SV+++ G +     DV+TWL + +TN
Sbjct:    1 MGYDRLGPS---GPSNPNQKDP--ATSLPE---LQKKTKTKLILFTLAVLVVGVVCFGIFAGIRAVDSGKTEPKLTRKPTQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDE--SHSDVMTWLSSAMTN 184          

HSP 2 Score: 56.6102 bits (135), Expect = 6.031e-52
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 3
Query:  684 HDTCSEGFEDLNGP---VKDQVSDKLRDLSELVSNCLAIFSAGGESNNFSRVPI 836
            HDTC++GF+++ G    VKDQV   ++DLSE+VSNCLAIF+  G+  + S VP+
Sbjct:  185 HDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAIFA--GKVKDLSGVPV 236          
BLAST of EY661114 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 6.979e-47
Identity = 84/199 (42.21%), Postives = 115/199 (57.79%), Query Frame = 1
Query:  112 MGYGRLQPSSDPGG---SSFREDQPGHATSAPQPXXXXXXXXXXXXXXXFALIIASAVSAVLLVGLKTRAV----GPTIGHKPTQAISRTCSKTLYPNLCVSSLLNFPGSLTASE-QDLVHISFNMTLQHFSRALYFTSGISYLQMDPHVRSAFDDCLELLDDSVDALSRSLGSVLLLPGGDINKREDVLTWLIATLTN 684
            MGY RL PS   G    S+         +++ QP                 L I+  ++A +  G+++R       P +  KP+QAIS+ C  T +P LCV SL++FPGSL AS  +DL+H++ NMTL HFS ALY ++ +S++ M P  RSA+D C+ELLDDSVDALSR+L SV+        K +DV TWL A LTN
Sbjct:    1 MGYERLGPSGATGSVTTSTTTAPILNQVSTSEQPENNNRRSKKKLVVSSIVLAISLILAAAIFAGVRSRLKLNQSVPGLARKPSQAISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLSFVDMPPRARSAYDSCVELLDDSVDALSRALSSVV----SSSAKPQDVTTWLSAALTN 195          

HSP 2 Score: 63.929 bits (154), Expect = 6.979e-47
Identity = 31/53 (58.49%), Postives = 43/53 (81.13%), Query Frame = 3
Query:  684 HDTCSEGFEDLN-GPVKDQVSDKLRDLSELVSNCLAIFSAGGESNNFSRVPIQ 839
            HDTC+EGF+ ++ G VKD ++  L++LSELVSNCLAIFSA  + ++F+ VPIQ
Sbjct:  196 HDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLAIFSASHDGDDFAGVPIQ 248          
The following BLAST results are available for this feature:
BLAST of EY661114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PME61_ARATH6.031e-5249.48Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME34_ARATH6.979e-4742.21Probable pectinesterase/pectinesterase inhibitor 3... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-029-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661114 ID=EY661114; Name=EY661114; organism=Citrus sinensis; type=EST; length=874bp
CCACGCGTCCGATAATTTGATTAATTATATTGTATGCAAACCCTTCACAT
TCTCCTCGAAGACCCAGCCAAACAAAAAAGACTAACTGAGGTCATCGGTA
CTTGAAATCTGATGGGTTACGGCAGGCTCCAGCCCTCCTCCGACCCCGGG
GGTTCTTCATTCCGCGAGGACCAACCCGGGCATGCCACGTCGGCACCCCA
GCCTTCTTCCCGCAGCAGGAAGAAGCTCATCCTCCTCTCCGTCCTCTCAT
TCGCATTAATCATCGCCTCCGCCGTCTCCGCCGTCCTCCTCGTGGGCCTC
AAGACGCGTGCCGTGGGCCCCACCATCGGCCACAAGCCCACCCAGGCCAT
TTCCCGCACGTGCAGCAAGACCCTCTACCCGAACCTCTGCGTCAGCTCGC
TCCTCAACTTCCCGGGCTCGCTCACCGCCTCCGAGCAGGACCTCGTCCAC
ATTTCGTTCAACATGACGCTGCAGCACTTCAGCAGGGCCCTGTATTTCAC
CTCCGGTATCTCCTATCTCCAGATGGACCCACACGTGCGCTCCGCATTCG
ACGACTGCCTCGAGCTCCTGGACGACTCCGTGGACGCGCTCTCACGCTCC
CTCGGCTCCGTGCTGCTGCTACCCGGAGGCGATATTAATAAAAGAGAGGA
CGTGCTGACGTGGCTCATCGCAACGCTGACCAACACGACACCTGTTCGGA
GGGATTTGAAGATTTGAACGGGCCGGTGAAGGATCAAGTTTCGGACAAGT
TGAGAGACTTGTCCGAATTGGTGAGCAATTGCTTGGCGATTTTTTCGGCG
GGTGGCGAGAGCAACAACTTTTCGAGGGTGCCGATTCAAACAGAAGGAAG
ATGCTGTTAACTTCCGAAGAGGTG
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