EY661054

Overview
NameEY661054
Unique NameEY661054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7624 contig Csv1_Contig7624:1..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY661054 vs. ExPASy Swiss-Prot
Match: YAI5_SCHPO (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe GN=SPAC24B11.05 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 49/129 (37.98%), Postives = 65/129 (50.39%), Query Frame = 3
Query:  243 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPYEN-LKPDPVXXXXXXXXXXXK--IIFTNADKVHAVKVLSRLGLEDCFEGI 620
            + FDLD+ LYP S  I       I  +  +KLGI   + E L  + Y++YG  + GL  + ++ D  DY   V   LP E  +K D V               IFTNA  VHA +VL  LG+EDCF+GI
Sbjct:    8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VLHHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYLGIEDCFDGI 135          
The following BLAST results are available for this feature:
BLAST of EY661054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YAI5_SCHPO3.759e-1237.98Uncharacterized protein C24B11.05 OS=Schizosacchar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661054 ID=EY661054; Name=EY661054; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGATTGGCCGAAAGTTGTCCACACATTTAGGGAGATTTTCT
CTTGCTTAATTATTATAGCAGCAAATAAAAATCAGTAGTTTGAGAATTAA
AATGAACTTTAATGTTGATTTGGGTAGTTTCAAGTTTTGTTGGAGCGTTG
AACTAACATGTTTTGATCACTTGCTGAAGGTCTTTTCAATCAAAATGGAG
TACGAAGGCCGTTACCGGATGGCTGCTGCGAAATATGATTGCCTTCTGTT
TGATCTAGATGATACCCTGTATCCCTACAGTTCTGGTATTGCTGCAGCAT
GCGGACAGAACATCAAAGATTATATGGTTGAAAAGCTTGGCATTGAGAGG
AGCAAAATTGAGGACTTGGGTAACTTGTTGTACAAGAATTACGGGACAAC
AATGGCTGGACTCAGGGCTATTGGCTATGACTTTGACTATGATGACTATC
ACAGTTTTGTGCATGGGAGGTTGCCTTATGAGAACTTGAAACCAGATCCT
GTTTTGAGGAGTCTTTTACTGAGCCTGCCCCTAAGGAAAATTATCTTCAC
AAATGCGGACAAAGTTCATGCTGTTAAAGTTCTCAGCAGGCTCGGATTGG
AAGACTGTTTTGAAGGGATTATATGCTTTGAGACTCTGAATCCGACTCAC
AAGAACAATGTTTCTGATGATGANGATGACATTGCTTTTGTGGAATCGGC
TGCTTCCACACAACTAGCGCCTATGGCCCTGAAATTTTCGACATAATTGG
TCATTTTGCTCAACCAAATCAAGCTTGGTTGCATTGCCAAGACTCCCATG
TGTGCAAACATCCGAATTACCATTTGAAAGCTCTCNAGATTGCAGCATTA
ACCTCAAGAACATGTTCTTTGAG
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