EY661025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661025 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.687e-29 Identity = 75/217 (34.56%), Postives = 121/217 (55.76%), Query Frame = 1 Query: 160 GVTGNIFAFVLFVSPIPTFRRILRNKSTEQFSGLPYICSLLNCLITLWYGMPLVSPGIILVATVNSVGAVFQLIYVSIFISYA--EKAIKLKISGLL-IAVFLVFLAIVFTSMEVFDSNGRRLFVGYLSVASLISMFASPLFIIKLVIKTKSVEFMPXXXXXXXXXXXXXXXAYGM-XQDDPFIYVPNGIXTLLGIAQVMLY-SYYSTKSGEVSRXP 795 GV GN+ +F LF +P TF RI + KS E+FS +PY+ +++NC++ ++YG+P+V ILV+T+N VG V +L YV +++ Y +K + I G L + V LV I+ T + ++ FVG + I+M+ +P I V+KTKSVE+MP Y + + D ++ NGI T L ++Q+++Y YY + E + P Sbjct: 12 GVIGNVISFGLFAAPAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIWTTYSLIFKIDYYVLASNGIGTFLALSQLIVYFMYYKSTPKEKTVKP 228
BLAST of EY661025 vs. ExPASy Swiss-Prot
Match: R1AP1_DROME (RAG1-activating protein 1 homolog OS=Drosophila melanogaster GN=slv PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.533e-14 Identity = 64/224 (28.57%), Postives = 105/224 (46.88%), Query Frame = 1 Query: 109 MSSVGISSIYSGCSVAAGVTGNIFAFVLFVSPIPTFRRILRNKSTEQFSGLPYICSLLNCLITLWYGMPLVSPGIILVATVNSVGAVFQLIYVSIFISY-AEKAIKLKISGLLIAVFLVFLAIVFTSMEVFDSNGRRLFV-GYLSVASLISMFASPLFIIKLVIKTKSVEFMPXXXXXXXXXXXXXXXAYGMXQDDPFIYVPNGIXTLLGIAQVMLYSYYSTKS 774 MS+V S+ S +V + V F+S R+ ++ KST SG+P+IC L+C L YG+ I+L VN +G+ L+Y I+ + K +K G ++ V +V IV+T+ + D R + V G + + FA+PL + VI+ K+ E +P YG+ D FI +PN + +L + Q+ L+ Y +S Sbjct: 1 MSAVAYDSLLSTTAVISTV-------FQFLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVL---VNIIGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVV--VIVYTN-RLEDQRDRMIHVTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLGLFVLYPPRS 211
BLAST of EY661025 vs. ExPASy Swiss-Prot
Match: R1AP1_DICDI (RAG1-activating protein 1 homolog OS=Dictyostelium discoideum GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.606e-14 Identity = 55/194 (28.35%), Postives = 94/194 (48.45%), Query Frame = 1 Query: 190 LFVSPIPTFRRILRNKSTEQFSGLPYICSLLNCLITLWYGMPLVSPGIILVATVNSVGAVFQLIYVSIFISYAE--KAIKLKISGLLIAVFLVFLAIVFTSMEVFDSNGRRLF-VGYLSVASLISMFASPLFIIKLVIKTKSVEFMPXXXXXXXXXXXXXXXAYGMXQDDPFIYVPNGIXTLLGIAQVMLYSYY 762 LF+ P+ T R I+ K+ +GL +I S+LNC LW L++ ++ VNS+G +F + YV + +A + + ++IA L I + D R+ +G+LS + MFASPL + +VI++K+ E M +G+ +D +IY+PN + ++L Q+ L Y Sbjct: 24 LFIMPLKTIRLIIEKKNVGTVAGLQFISSVLNCF--LWISYALLTSNTTML-FVNSIGMMFSIYYVFNYWKNINQVRASRDYLKKVMIACVLAITIISISYYNTVDDLDTRISRLGFLSSVVCVLMFASPLEKMAIVIQSKNSEGMIINVAILSLLCGLSWTIFGLLLNDIYIYLPNILASILSFVQLTLIKLY 214
BLAST of EY661025 vs. ExPASy Swiss-Prot
Match: R1AP1_DROPS (RAG1-activating protein 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=slv PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.934e-14 Identity = 51/194 (26.29%), Postives = 84/194 (43.30%), Query Frame = 1 Query: 193 FVSPIPTFRRILRNKSTEQFSGLPYICSLLNCLITLWYGMPLVSPGIILVATVNSVGAVFQLIYVSIFISYAEKAIKLKISGLLIAVFLVFLAIVFTSMEVFDSNGRRLFVGYLSVASLISMFASPLFIIKLVIKTKSVEFMPXXXXXXXXXXXXXXXAYGMXQDDPFIYVPNGIXTLLGIAQVMLYSYYSTKS 774 F+S R+ ++ KST SG+P+IC L+C L YG+ I+L VN +G+ LIY I+ + + L+ + +V+T+ + G + FA+PL + VI+ K+ E +P YG+ D FI +PN + LL + Q+ L+ Y +S Sbjct: 21 FLSGAMICRKYIQKKSTGDSSGVPFICGFLSCSFWLRYGVLTEEQSIVL---VNIIGSTLFLIYTLIYYVFTVNKRAFVRQFAFVLAVLIAVVVVYTNRLADQRDEMIRITGIFCCIVTVCFFAAPLATLLHVIRAKNSESLPLPLIATSFLVSLQWLIYGILISDSFIQIPNFLGCLLSMLQLSLFVVYPPRS 211
BLAST of EY661025 vs. ExPASy Swiss-Prot
Match: R1AP1_XENTR (RAG1-activating protein 1 homolog OS=Xenopus tropicalis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.434e-12 Identity = 53/196 (27.04%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 175 IFAFVLFVSPIPTFRRILRNKSTEQFSGLPYICSLLNCLITLWYGMPLVSPGIILVATVNSVGAVFQLIYVSIFISYAEKAIKLKISGLLIAVFLVFLAIVFTSMEVFDSNGRRLFVGYLSVASLISMFASPLFIIKLVIKTKSVEFMPXXXXXXXXXXXXXXXAYGMXQDDPFIYVPNGIXTLLGIAQVMLYSYY 762 +F +F S + R ++ +S E LP++ + LN L +YG L G +++ VN +GA Q +Y++ +I Y+ + + +S +L+++ ++FLA + ++ D N R +G ISM+ SPL + +IK+KS + + YG Q D +I VPN + + + L+S Y Sbjct: 13 VFTLGMFSSGLSDLRVMVAKRSVENIQFLPFLTTDLNNLGWFYYGY-LKGDGTLII--VNLIGASLQTLYMAAYILYSLER-RYVVSQVLVSLGVLFLAHCYFTLWTPDINSRLNQLGLFCSIFTISMYLSPLADLAQIIKSKSTKCLSFPLTVATFLTSTSWVLYGWVQSDLYITVPNFPGIVTSLLRFWLFSRY 204
BLAST of EY661025 vs. ExPASy Swiss-Prot
Match: R1AP1_XENLA (RAG1-activating protein 1 homolog OS=Xenopus laevis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.705e-11 Identity = 48/196 (24.49%), Postives = 94/196 (47.96%), Query Frame = 1 Query: 175 IFAFVLFVSPIPTFRRILRNKSTEQFSGLPYICSLLNCLITLWYGMPLVSPGIILVATVNSVGAVFQLIYVSIFISYAEKAIKLKISGLLIAVFLVFLAIVFTSMEVFDSNGRRLFVGYLSVASLISMFASPLFIIKLVIKTKSVEFMPXXXXXXXXXXXXXXXAYGMXQDDPFIYVPNGIXTLLGIAQVMLYSYY 762 +F +F S + R ++ +S E LP++ + LN L +YG L G +++ VN +GA Q +Y+ ++ Y+ + + S +L+++ ++ L + ++ + D N R +G ISM+ SPL + +I++KS + + YG+ Q D +I VPN + + + L+S + Sbjct: 13 VFTLGMFSSGLSDLRVMVAQRSVENIQYLPFLTTDLNNLGWFYYGY-LKGDGTLMI--VNVIGASLQSLYMGAYLLYSPER-RYVGSQVLVSLGVLLLGYCYFTLWILDLNSRLNQLGLFCSVFTISMYLSPLADLAQIIRSKSTKCLSFPLTVATFLTSSSWVLYGLVQSDLYITVPNFPGIVTSLVRFWLFSQF 204
BLAST of EY661025 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.615e-11 Identity = 55/197 (27.92%), Postives = 93/197 (47.21%), Query Frame = 1 Query: 175 IFAFVLFVSPIPTFRRILRNKSTEQFSGLPYICSLLNCLITLWYGMPLVSPGIILVATVNSVGAVFQLIYVSIFISYA-EKAIKLKISGLLIAVFLVFLAIVFTSMEVFDSNGRRLFVGYLSVASLISMFASPLFIIKLVIKTKSVEFMPXXXXXXXXXXXXXXXAYGMXQDDPFIYVPNGIXTLLGIAQVMLYSYY 762 +F +F + + R + R +S + LP++ + +N L L YG+ L G +++ VNSVGAV Q +Y+ ++ Y+ +K L + L+AV L L + + V D R +G ISM+ SPL + +++TKS + + YG DP+I VPN L + ++ L+ Y Sbjct: 17 LFTLGMFSTGLSDLRHMQRTRSVDNIQFLPFLTTDVNNLSWLSYGV-LKGDGTLII--VNSVGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLL--LGYGYFWLLVPDLEARLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASWSIYGFRLRDPYITVPNLPGILTSLIRLGLFCKY 208 The following BLAST results are available for this feature:
BLAST of EY661025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661025 ID=EY661025; Name=EY661025; organism=Citrus sinensis; type=EST; length=933bpback to top |