EY661003

Overview
NameEY661003
Unique NameEY661003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 9.556e-65
Identity = 117/146 (80.14%), Postives = 132/146 (90.41%), Query Frame = 1
Query:  229 ASRRLGFSAA-DPLLTCHVASRLSSIKTKGTRAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLP 663
            ++RRLGFSA  D   + HVAS++ S++ KG R V++MAKKSVG+L+  DLKGKKVFVRADLNVPLDDNQNITDDTRIRAA+PTIK LI+NGAKVILS+HLGRPKGVTPKFSLAPLVPRLSELLGI+VVKADDCIGPEVE LVASLP
Sbjct:   38 SARRLGFSAVVDSRFSVHVASKVHSVRGKGARGVITMAKKSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAKVILSTHLGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLP 183          

HSP 2 Score: 38.1206 bits (87), Expect = 9.556e-65
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            ++L  LADLYVNDAFGTAHR   S    ++  + S AGF
Sbjct:  208 KKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGF 246          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 4.697e-64
Identity = 121/147 (82.31%), Postives = 132/147 (89.80%), Query Frame = 1
Query:  235 RRLGFS--AADPLLTCHVASRLSSIKT--KGTRAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLP 663
            RRLGF+  AAD L T HVA++L S+K+  K  R V SMAKKSVG+L+ A+LKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHL+ NGAKVILSSHLGRPKGVTPK+SLAPLVPRLSELLGIQVVK +DCIGPEVEKLVASLP
Sbjct:   39 RRLGFAGAAADSLFTNHVATKLRSLKSSSKPIRGVASMAKKSVGDLTAAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLMANGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELLGIQVVKVEDCIGPEVEKLVASLP 185          

HSP 2 Score: 38.1206 bits (87), Expect = 4.697e-64
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            ++L  LADLYVNDAFGTAHR   S    ++  + S AGF
Sbjct:  210 KKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGF 248          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.757e-60
Identity = 110/132 (83.33%), Postives = 121/132 (91.67%), Query Frame = 1
Query:  277 HVASRLSSIKTKGT---RAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLP 663
            HV S+++S K++ T   R V SMAKKSVG+L+ ADLKGKKVFVRADLNVPLDD+QNITDDTRIRAA+PTIKHLI NGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLG+QVVKADDCIGP+VEKLVA LP
Sbjct:    7 HVLSKINSYKSQSTKPIRGVASMAKKSVGDLTSADLKGKKVFVRADLNVPLDDSQNITDDTRIRAAIPTIKHLINNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGLQVVKADDCIGPDVEKLVAELP 138          

HSP 2 Score: 38.1206 bits (87), Expect = 1.757e-60
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            ++L  LADLYVNDAFGTAHR   S    ++  + S AGF
Sbjct:  163 KKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGF 201          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.081e-58
Identity = 111/145 (76.55%), Postives = 126/145 (86.90%), Query Frame = 1
Query:  232 SRRLGFSA-ADPLLTCHVASRLSSIKT-KGTRAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            +R L F+A ADP L  HVASR  +    +GTRAV +MAKKSVG+L+ ADL+GK+V VRADLNVPLDDNQNITDDTRIRAA+PTIK+L+ NGAKVIL+SHLGRPKGVTPKFSLAPLVPRLSELLGI+V KA+D IGPEVEKLVA L
Sbjct:   37 ARSLAFAAGADPRLAVHVASRCRAASAARGTRAVATMAKKSVGDLTAADLEGKRVLVRADLNVPLDDNQNITDDTRIRAAIPTIKYLLSNGAKVILTSHLGRPKGVTPKFSLAPLVPRLSELLGIEVKKAEDVIGPEVEKLVADL 181          

HSP 2 Score: 36.5798 bits (83), Expect = 2.081e-58
Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            ++L  LADL+VNDAFGTAHR   S    ++  + S AGF
Sbjct:  207 KKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGF 245          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.786e-47
Identity = 85/108 (78.70%), Postives = 97/108 (89.81%), Query Frame = 1
Query:  340 KKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLP 663
            KKSVG L  ADLKGK+VFVR DLNVPLD+N NITDDTRIRAAVPTIK+L+Q+G+ VIL+SHLGRPKGVTPK+SL PLVPRLSELLG++V  A+D IGPEVEKLVA +P
Sbjct:    4 KKSVGSLKEADLKGKRVFVRVDLNVPLDENFNITDDTRIRAAVPTIKYLMQHGSHVILASHLGRPKGVTPKYSLKPLVPRLSELLGVEVKIANDSIGPEVEKLVAEIP 111          

HSP 2 Score: 38.891 bits (89), Expect = 6.786e-47
Identity = 32/69 (46.38%), Postives = 37/69 (53.62%), Query Frame = 3
Query:  714 KNDPEFAKSLASWQISMSMMLLGPL-TDPCPH*GSHKYLKLLVLGSLAE-ELDYLVGAF-SAQEPFAAM 911
            KN+PEFAK LAS          G          G  KYLK  V G L + ELDYLVGA  + Q+PFAA+
Sbjct:  129 KNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAGFLMQKELDYLVGAVANPQKPFAAI 197          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.153e-46
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 1
Query:  340 KKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLP 663
            K+SVG L  ADLKGKKVFVRADLNVPLDD Q ITDDTRIRA++PTIK+L++ GAKVIL+SHLGRPKGVTPKFSL PLV RLSELLG++VV A DCIG EVEKL A+LP
Sbjct:    4 KRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVILASHLGRPKGVTPKFSLKPLVARLSELLGLEVVMAPDCIGEEVEKLAAALP 111          

HSP 2 Score: 36.5798 bits (83), Expect = 1.153e-46
Identity = 20/39 (51.28%), Postives = 25/39 (64.10%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            ++L  +ADLYVNDAFGTAHR   S    ++    S AGF
Sbjct:  136 KKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGF 174          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.862e-40
Identity = 92/154 (59.74%), Postives = 111/154 (72.08%), Query Frame = 1
Query:  214 RMPTSASRRLGFSA-ADPLLTCHVASRLS-SIKTKG-TRAVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDDNQ-NITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK-GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            R+   A R + FS+ A P+L    A  +S  I+  G +R VV   KKSVG+L  ADL+GK+VFVRADLNVPLD     ITDDTRIRAAVPT+K+L+ NGAKV+L+SHLGRPK G   K+ L P+V RLSELLG +V K DDCIGP VE+ VASL
Sbjct:   18 RVAAVAPRVVPFSSVARPVLRSTFAPEVSIDIRRAGRSRIVVEAVKKSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKEVKKVDDCIGPSVEQAVASL 171          

HSP 2 Score: 35.4242 bits (80), Expect = 1.862e-40
Identity = 20/39 (51.28%), Postives = 25/39 (64.10%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            ++L   ADLYVNDAFGTAHR   S    ++  + S AGF
Sbjct:  197 KKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGF 235          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGKH_CHLRE (Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.852e-39
Identity = 78/115 (67.83%), Postives = 91/115 (79.13%), Query Frame = 1
Query:  322 AVVSMAKKSVGELSGADLKGKKVFVRADLNVPLDD-NQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPK-GVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            +VV   KKSVG+L  ADL+GK+VFVRADLNVPLD     ITDDTRIRAAVPT+K+L+ NGAKV+L+SHLGRPK G   K+ L P+V RLSELLG  V K DDCIGPEVEK V ++
Sbjct:   56 SVVEAVKKSVGDLHKADLEGKRVFVRADLNVPLDKATLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKPVTKVDDCIGPEVEKAVGAM 170          

HSP 2 Score: 35.8094 bits (81), Expect = 9.852e-39
Identity = 20/39 (51.28%), Postives = 25/39 (64.10%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            ++L   ADLYVNDAFGTAHR   S    ++  + S AGF
Sbjct:  196 KKLAANADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGF 234          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.112e-35
Identity = 71/109 (65.14%), Postives = 81/109 (74.31%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            M+KK+V  LS AD+ GK+  VR D NVPLDD  NITDDTRIRAA+PTI+ L Q GAKVIL+SH GRPKGV  K  L P+  RLSELLG +VVK DD IG EV   VA+L
Sbjct:    1 MSKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAKRLSELLGQEVVKTDDSIGDEVAAKVAAL 109          

HSP 2 Score: 32.7278 bits (73), Expect = 2.112e-35
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHR 793
            ++L   AD YVNDAFGTAHR
Sbjct:  135 KKLAANADFYVNDAFGTAHR 154          
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.115e-35
Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 1
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            MAKKSV  L+ ADL GK+VFVR D NVPL+++  ITDDTRIRAA+PTIK+L + GAKVIL SH+GRPKG V     L P+  RLSELLG  V K DDC+G  V + +A+L
Sbjct:    1 MAKKSVANLTEADLSGKRVFVRVDFNVPLNESGVITDDTRIRAALPTIKYLTEKGAKVILGSHMGRPKGQVVDSMRLTPVAARLSELLGQSVTKCDDCVGDAVNQAIANL 110          

HSP 2 Score: 33.8834 bits (76), Expect = 2.115e-35
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  734 QELGLLADLYVNDAFGTAHR 793
            ++L   AD+YVNDAFGTAHR
Sbjct:  136 KQLAANADIYVNDAFGTAHR 155          

HSP 3 Score: 25.0238 bits (53), Expect = 2.115e-35
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  714 KNDPEFAKSLAS 749
            KNDPEFAK LA+
Sbjct:  129 KNDPEFAKQLAA 140          
The following BLAST results are available for this feature:
BLAST of EY661003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKH_ARATH9.556e-6580.14Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGKH_TOBAC4.697e-6482.31Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_SPIOL1.757e-6083.33Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKH_WHEAT2.081e-5876.55Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKY_TOBAC6.786e-4778.70Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKY_WHEAT1.153e-4679.63Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_VOLCA1.862e-4059.74Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGKH_CHLRE9.852e-3967.83Phosphoglycerate kinase, chloroplastic OS=Chlamydo... [more]
PGK_ANAVT2.112e-3565.14Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_SYNP22.115e-3561.82Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661003 ID=EY661003; Name=EY661003; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCATTTTCCTTCCCCATTCTTCAATCAAACCAAAACCCAC
TTCCCATTTCTCCACTTTGTCGACAAAGTTTCAATCTTTTGCGCCTTTAC
TACGCCACTCCACTCCCACCACATCAATGGCTTCAGCCACCGCTCCCACT
ACTTTATCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTCTTCCCCACG
CGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGCTGGGGTTCT
CCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGGCTGAGCTCG
ATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAAGAAGAGCGT
GGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGTTTGTAAGAG
CTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACTGATGATACT
AGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCAAAATGGAGC
TAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTGTTACTCCGA
AATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTCCTGGGCATT
CAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGTAGAAAAGCTTGT
AGCCTCACTTCCTGAAGGCGGTGTTCTTCTTNCTGAAAACGTGNAGGTTC
TACAAGAGGAGGAAAAAACGATCCTGAGTTTGCCAAGAGCTTGGCCTCTT
GGCAGATCTCTATGTCAATGATGCTTTTGGGACCGCTCACAGACCCATGC
CCTCACTGAGGGAGTCACAAATATTTGAAGCTTCTGGTGCTGGGTTCTCT
TGCAGAAGAACTGGACTACCTTGTTGGGGCGTTTTCAGCCCAAGAGCCAT
TTGCTGCCATGGGG
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