EY661002

Overview
NameEY661002
Unique NameEY661002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY661002 vs. ExPASy Swiss-Prot
Match: Y1491_ARATH (DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.017e-23
Identity = 74/249 (29.72%), Postives = 124/249 (49.80%), Query Frame = 3 
Query:   15 VHFLGYGNRLGFDPLPSKLQRLRCKCNFHALKFVPKIQEAASLLVRRTRKHDSARSMLDKQLLGNYMPNIPSKHHEVARGSYRYLALHLRFEEDMVAYSQCDFGGGESERKELQAYREIHFPLLIERLKSSKPISPEELRKLGRCPLTPEEAALLLSALGFKHGTYIYLAGSQIYGANSRMQAFTSLYPNLVTKETLLTPSELEPFRNFSSQLAALDFIACATADVFAMT-DSGSQLSSLVSGFRLTMG 758
            ++   + +RL  +    + QRLRC+ N+HAL+F P I + +  +V + R                      S+ H        ++++HLRFE DM+A++ C       E+K L+ YR+ +F        + K +   E R +G+CPLTPEE  L+L A+ F + T IYLA  +++G    M+ F +L+P L    + + PSE     +     +A+D++ C  +D+F  T D  S  ++ + G RL  G
Sbjct:  203 IYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMKLSESIVDKLR----------------------SQGH--------FMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKENF--------ADKRLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRL-DNHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYG 412
The following BLAST results are available for this feature:
BLAST of EY661002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1491_ARATH3.017e-2329.72DUF246 domain-containing protein At1g04910 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661002 ID=EY661002; Name=EY661002; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGTTGTTCATTTCCTTGGATATGGAAATCGACTAGGTTTT
GATCCATTGCCTTCTAAGCTTCAGAGACTAAGGTGCAAATGTAACTTCCA
TGCATTGAAGTTTGTGCCAAAAATTCAAGAAGCTGCTTCATTACTGGTCA
GAAGGACTAGGAAGCATGATTCTGCTCGCAGTATGCTAGACAAACAACTG
CTAGGAAACTACATGCCTAACATTCCCTCCAAACACCATGAGGTTGCAAG
AGGTTCATATAGATATCTTGCTTTACACTTAAGATTTGAAGAGGACATGG
TGGCCTACTCCCAATGTGATTTTGGAGGAGGAGAAAGCGAGAGAAAAGAA
CTTCAAGCGTACAGAGAAATCCATTTCCCTCTGCTGATTGAACGCTTGAA
GAGCTCAAAGCCTATTTCTCCTGAGGAGTTGAGAAAATTGGGAAGGTGCC
CGCTGACACCAGAAGAGGCAGCACTTCTTCTTTCTGCTCTTGGTTTTAAA
CATGGAACTTACATATATCTGGCAGGCTCTCAAATATATGGAGCAAATTC
CAGGATGCAGGCTTTTACCAGCCTCTATCCAAATTTGGTAACAAAGGAAA
CGCTCCTCACACCAAGTGAGCTTGAACCTTTCAGGAATTTCTCGTCTCAG
CTGGCAGCACTGGATTTTATTGCCTGTGCAACTGCTGATGTGTTTGCCAT
GACCGACTCTGGGAGCCAATTGTCATCCCTTGTATCTGGTTTTCGACTTA
CTATGGGAATGGGCAGGCTCCTACTTTGCNGNCTAAACAGAGAAGCTTGC
AGNCATTTTGTCAGAAATAGCACCATAGATGGATGATTTTGAGATAGAGT
AAGAAGATGATTGAGAANGGTCAAGGNTACNAGTAAGGGGTTTGGACGAA
CATTATCGACACCANGGTCCCAGA
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