EY661000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.062e-21 Identity = 43/56 (76.79%), Postives = 52/56 (92.86%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPGV 169 TMWKLPM+GCTD+ QV+KEVGE +KEYP++F+R+IGFDN RQVQCISF+ AKPPGV Sbjct: 125 TMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPGV 180
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_HORVU (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.269e-21 Identity = 44/55 (80.00%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDATQVL EV EV+KEYP ++VRIIGFDN RQVQC+SF+A KPPG Sbjct: 113 TMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 167
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS3_WHEAT (Ribulose bisphosphate carboxylase small chain clone 512 (Fragment) OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.988e-21 Identity = 43/55 (78.18%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDATQV+ EV EV+KEYP ++VRIIGFDN RQVQC+SF+A KPPG Sbjct: 52 TMWKLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 106
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS2_WHEAT (Ribulose bisphosphate carboxylase small chain PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.533e-20 Identity = 42/55 (76.36%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDATQVL EV EV+KEYP ++VR+IGFDN RQVQC+SF+A +PPG Sbjct: 114 TMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRPPG 168
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_MUSAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.002e-20 Identity = 43/55 (78.18%), Postives = 48/55 (87.27%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDA QV KEV E +KEYPH+F+RIIGFDN RQVQCISF+A KP G Sbjct: 125 TMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCISFIAYKPTG 179
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS1_WHEAT (Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 2.002e-20 Identity = 42/55 (76.36%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDATQVL EV EV+KEYP ++VR+IGFDN RQVQC+SF+A +PPG Sbjct: 113 TMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRPPG 167
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.461e-20 Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPMYGCTD QVL EV E +K YP +F+RIIGFDNKRQVQC+SF+A KPPG Sbjct: 125 TMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKPPG 179
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_SINAL (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Sinapis alba GN=RBCS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.937e-20 Identity = 41/54 (75.93%), Postives = 49/54 (90.74%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 163 TMWKLP++GCTD+ QVLKEV E +KEYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 24 TMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPP 77
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS1A_ARATH (Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.298e-19 Identity = 41/54 (75.93%), Postives = 49/54 (90.74%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 163 TMWKLP++GCTD+ QVLKEV E +KEYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 123 TMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.891e-19 Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 163 TMWKLP++GCTD+ QVLKEV E +KEYP +F+RIIGFDN RQVQCISF+A KPP Sbjct: 123 TMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176 The following BLAST results are available for this feature:
BLAST of EY661000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661000 ID=EY661000; Name=EY661000; organism=Citrus sinensis; type=EST; length=439bpback to top |