EY660993

Overview
NameEY660993
Unique NameEY660993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length404
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3203 contig Csv1_Contig3203:207..610. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660993 vs. ExPASy Swiss-Prot
Match: P2C40_ARATH (Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.207e-13
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 3
Query:   12 RAAECAGFSLEELMNVPAGRRRKYHDDVTVIVIILGTNKRASKASTCV 155
            +AA  AGF+LEEL NVPAGRRR+YHDDVT++VI LGT++R SKAST V
Sbjct:  446 KAAARAGFTLEELTNVPAGRRRRYHDDVTIMVITLGTDQRTSKASTFV 493          
The following BLAST results are available for this feature:
BLAST of EY660993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
P2C40_ARATH6.207e-1372.92Probable protein phosphatase 2C 40 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660993 ID=EY660993; Name=EY660993; organism=Citrus sinensis; type=EST; length=404bp
CCACGCGTCCGAGAGCAGCAGAATGTGCAGGTTTCAGTCTGGAAGAATTG
ATGAATGTTCCAGCTGGTAGACGGAGAAAATATCATGATGATGTAACTGT
AATAGTAATCATCCTTGGAACCAACAAGCGCGCGTCTAAGGCATCAACTT
GCGTGTAAGGCGTCACCATTTTCTGTATTCAACTGGTTATAATGAATTTG
CATTGTAGATTATGGCATTTAAAATTGTACATATAGTTTGATGTCACCGT
CTTCTGTTTTCTACCATCGCTTTTAATAGACTCATAGTTGTAGCTATAAT
TTTGCAATTGTATATATTGCTGATGGAAGAAAAATTTTCTTTTCCGGGNA
AAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAG
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