EY660959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY660959 vs. ExPASy Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.013e-32 Identity = 66/138 (47.83%), Postives = 96/138 (69.57%), Query Frame = 1 Query: 148 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKSLLNPLYLPGSRITSSHFDTKVRALARKYL 552 M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S I SS FD KV+ L +K+L Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSPIRSSAFDRKVQFLGKKHL 138
BLAST of EY660959 vs. ExPASy Swiss-Prot
Match: TPPC2_PONAB (Trafficking protein particle complex subunit 2 OS=Pongo abelii GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32 Identity = 66/138 (47.83%), Postives = 96/138 (69.57%), Query Frame = 1 Query: 148 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKSLLNPLYLPGSRITSSHFDTKVRALARKYL 552 M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S I SS FD KV+ L +K+L Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSPIRSSAFDRKVQFLGKKHL 138
BLAST of EY660959 vs. ExPASy Swiss-Prot
Match: TPPC2_MOUSE (Trafficking protein particle complex subunit 2 OS=Mus musculus GN=Trappc2 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32 Identity = 66/138 (47.83%), Postives = 96/138 (69.57%), Query Frame = 1 Query: 148 MATTACFIIVSRNEIPIYEAEV---GSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKSLLNPLYLPGSRITSSHFDTKVRALARKYL 552 M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S I SS FD KV+ L +K+L Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSPIRSSAFDRKVQFLGKKHL 138
BLAST of EY660959 vs. ExPASy Swiss-Prot
Match: TPPC2_HUMAN (Trafficking protein particle complex subunit 2 OS=Homo sapiens GN=TRAPPC2 PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32 Identity = 66/138 (47.83%), Postives = 96/138 (69.57%), Query Frame = 1 Query: 148 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKSLLNPLYLPGSRITSSHFDTKVRALARKYL 552 M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S I SS FD KV+ L +K+L Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSPIRSSAFDRKVQFLGKKHL 138
BLAST of EY660959 vs. ExPASy Swiss-Prot
Match: TRS20_SCHPO (Transport protein particle 20 kDa subunit OS=Schizosaccharomyces pombe GN=trs20 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31 Identity = 64/135 (47.41%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 157 TACFIIVSRNEIPIYEAEVGSAVKREDAA---QLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKSLLNPLYLPGSRITSSHFDTKVRALARKYL 552 TA I+ + P+YE E+G ++ D + L+QFI+H++LDIV L WT++A ++K ID+F+++ +S YVT + RFMLLH +++ D IK FFQE+HELYIK+L++P Y P I S FD KVR++AR+YL Sbjct: 2 TAYAAIIGTKDNPVYELEMGPINEKLDRSLNSHLNQFIVHSSLDIVDQLQWTSNAFYMKTIDQFHEMYISAYVTPSNMRFMLLHQNQSADNIKLFFQELHELYIKTLMSPFYQPNQPIRSQAFDLKVRSIARRYL 136
BLAST of EY660959 vs. ExPASy Swiss-Prot
Match: TPPC2_DICDI (Trafficking protein particle complex subunit 2 OS=Dictyostelium discoideum GN=trappc2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.351e-30 Identity = 61/132 (46.21%), Postives = 93/132 (70.45%), Query Frame = 1 Query: 154 TTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKSLLNPLYLPGSRITSSHFDTKVRALARKY 549 +T F+I+ +N+ P+YE E V++++ L Q+I H +LDIV++ W ++ M+LK ID+FN + +S +VTAGH +F+LLH+ +++D IK+FF EVH+LY+K LLNP Y ITS+ FD KVR + KY Sbjct: 2 STFTFLIIGKNDNPLYEIEFPITVQKKETYVL-QYIAHGSLDIVEEHVWKSNNMYLKIIDKFNKVQISSFVTAGHIKFLLLHEKKDEDAIKNFFVEVHDLYLKILLNPFYEYNKPITSTAFDAKVRKIGTKY 132
BLAST of EY660959 vs. ExPASy Swiss-Prot
Match: TRS20_YEAST (Transport protein particle 20 kDa subunit OS=Saccharomyces cerevisiae GN=TRS20 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19 Identity = 55/169 (32.54%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 166 FIIVSRNEIPIYEAEVGSAVKRE----DAAQLHQFILHAALDIVQDLAW-----------------------------TTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSR-------NDDGIKSFFQEVHELYIKSLLNPLYLPGSRITSSHFDTKVRALARKYL 552 F I+ + + P+YE E +A + D +L+ FILHA+LDIV+DL W T +L +D F L ++ Y++ +F+++H + +D+ ++SF+QEVHELY+K+L+NP Y I S FD++VR LARK+L Sbjct: 5 FAIIGKKDNPVYEIEFTNAENPQGFPQDLKELNPFILHASLDIVEDLQWQINPTSQLNGNGGNGSNGGGGFLRSRAVNNTDNCYLGKVDHFYGLAITAYISYSGMKFVMIHGNSANSSVVIDDNNMRSFYQEVHELYVKTLMNPFYKITDPIRSPAFDSRVRTLARKHL 173 The following BLAST results are available for this feature:
BLAST of EY660959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660959 ID=EY660959; Name=EY660959; organism=Citrus sinensis; type=EST; length=776bpback to top |