EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2C_ARATH (Translation initiation factor IF-2, chloroplastic OS=Arabidopsis thaliana GN=At1g17220 PE=2 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 1.508e-91 Identity = 167/202 (82.67%), Postives = 188/202 (93.07%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + QLN+I+KVDVQGSIEAVRQALQVLPQ+NVTLKFLLQATGD+S SDVDLA AS+AI+ GFNVKA GSVK A+NKGVEIRLYRVIY+LIDD+RNAMEGLLE+VEEQ+PIGSAEVRA FSSGSGRVAGCMV+EGK VK CGIRV+R GKTVHVGVLDSL+RVKENVKEV+AGLECG+G DYDDW EGDIIEAFN++Q++RT Sbjct: 798 LHQLNIILKVDVQGSIEAVRQALQVLPQENVTLKFLLQATGDVSNSDVDLASASEAIVFGFNVKASGSVKKAAENKGVEIRLYRVIYELIDDVRNAMEGLLESVEEQIPIGSAEVRATFSSGSGRVAGCMVNEGKFVKDCGIRVVRKGKTVHVGVLDSLKRVKENVKEVSAGLECGIGMDDYDDWIEGDIIEAFNAVQKRRT 999
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2C_PHAVU (Translation initiation factor IF-2, chloroplastic OS=Phaseolus vulgaris GN=IF2CP PE=2 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 3.046e-84 Identity = 154/200 (77.00%), Postives = 179/200 (89.50%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRK 606 + QLN+I+KVD+QGSIEAVR+ALQVLPQ+NVTLKFLL+ATGD++ SDVDLAVASKAII+GFN PGSVK+YADNK VEIRLYRVIY+LIDD+R AMEGLLE VEEQ+ IGSA VRA+FSSGSGRVAGCMV+EGK++K CGIRV R GK VHVG++DSLRRVKE VKEVNAGLECG+G D+DDWEEGDIIE ++R+ Sbjct: 797 LHQLNIILKVDLQGSIEAVRKALQVLPQENVTLKFLLEATGDVNTSDVDLAVASKAIIMGFNAXTPGSVKSYADNKAVEIRLYRVIYELIDDVRKAMEGLLEPVEEQLTIGSAVVRAVFSSGSGRVAGCMVTEGKVLKDCGIRVKRKGKIVHVGIIDSLRRVKEIVKEVNAGLECGLGLEDFDDWEEGDIIEPSTQLRRR 996
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_CYAP7 (Translation initiation factor IF-2 OS=Cyanothece sp. (strain PCC 7424) GN=infB PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.021e-55 Identity = 100/203 (49.26%), Postives = 149/203 (73.40%), Query Frame = 1 Query: 4 RVRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++++LN+I+K DVQGS+EA+ +L+ LPQ+ V ++ LL A G+I+ +DVDLA AS A+I+GFN + AD +G++IR Y +IY L+DD++ AMEGLL+ E + P+G AEVRA+F G G VAGC V GK+++ +RV R G+ ++ GVLDSL+R+KE+ +EVNAG ECG+G + ++DW+EGD IE F + ++RT Sbjct: 895 KLKELNLILKADVQGSVEAILGSLKQLPQNEVQIRVLLAAPGEITETDVDLAAASGAVIVGFNTTLASGARQSADQEGIDIREYNIIYKLLDDIQGAMEGLLDPEEVESPLGVAEVRAVFPVGRGAVAGCYVQSGKIIRNRQLRVRRKGEVIYEGVLDSLKRMKEDAREVNAGYECGIGVSKFNDWQEGDSIEVFEMVMKRRT 1097
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_NOSP7 (Translation initiation factor IF-2 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=infB PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.971e-55 Identity = 101/202 (50.00%), Postives = 146/202 (72.28%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ AL+ +PQ+ V ++ LL G+I+ +D+DLA AS A+I+GFN + AD GV++R Y VIY L++D+++A+EGLLE + P+G EVRA+F G G VAGC V GKLV+ C +RV R GK ++ GVLDSL+R+KE+ +EVNAG ECGVG ++DW EGDIIE++ + ++RT Sbjct: 850 LKELNLILKGDVQGSVEAIVGALKQIPQNEVQIRMLLATAGEITETDIDLAAASNAVIIGFNTTFASGARQAADEAGVDVREYNVIYKLLEDIQDALEGLLEPELVEEPLGQTEVRAVFPVGRGAVAGCYVQSGKLVRNCKVRVRRGGKVIYEGVLDSLKRMKEDAREVNAGYECGVGMDKFNDWVEGDIIESYQMVTKRRT 1051
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_ANAVT (Translation initiation factor IF-2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=infB PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.474e-54 Identity = 99/202 (49.01%), Postives = 145/202 (71.78%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ +L+ +PQ+ V ++ LL A G+I+ +D+DLA AS A+I+GFN + AD GV++R Y +IY LI+D++ A+EGLLE + P+G EVRA+F G G VAGC V GKLV+ C +RV R GK ++ GVLDSL+R+K++ +EVNAG ECG+G + DW EGDIIE++ + ++RT Sbjct: 832 LKELNLILKGDVQGSVEAIVGSLKQIPQNEVQIRMLLTAAGEITETDIDLAAASGAVIIGFNTTFASGARQAADEAGVDVREYNIIYKLIEDIQGALEGLLEPELVEEPLGQTEVRAVFPVGRGAVAGCYVQSGKLVRNCKVRVRRAGKVIYEGVLDSLKRMKDDAREVNAGYECGIGVDKFHDWAEGDIIESYQMVTKRRT 1033
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_ANASP (Translation initiation factor IF-2 OS=Anabaena sp. (strain PCC 7120) GN=infB PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.474e-54 Identity = 99/202 (49.01%), Postives = 145/202 (71.78%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ +L+ +PQ+ V ++ LL A G+I+ +D+DLA AS A+I+GFN + AD GV++R Y +IY LI+D++ A+EGLLE + P+G EVRA+F G G VAGC V GKLV+ C +RV R GK ++ GVLDSL+R+K++ +EVNAG ECG+G + DW EGDIIE++ + ++RT Sbjct: 833 LKELNLILKGDVQGSVEAIVGSLKQIPQNEVQIRMLLTAAGEITETDIDLAAASGAVIIGFNTTFASGARQAADEAGVDVREYNIIYKLIEDIQGALEGLLEPELVEEPLGQTEVRAVFPVGRGAVAGCYVQSGKLVRNCKVRVRRAGKVIYEGVLDSLKRMKDDAREVNAGYECGIGVDKFHDWAEGDIIESYQMVTKRRT 1034
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_CYAP4 (Translation initiation factor IF-2 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=infB PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.926e-54 Identity = 100/202 (49.50%), Postives = 140/202 (69.31%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ AL +PQ+ V L+ L A G+++ +DVDLA AS A+++GFN + AD GV+IR Y +IY L+DD+ AMEGLLE + P+G A+VRA+F G G VAGC V GKL++ C IRV+R G VH G L+SL+R+KE+ +EVNAG ECG+ D+ W EGD IEA+ + ++RT Sbjct: 799 LKELNLILKADVQGSVEAILNALGQIPQNEVQLRVLYAAPGEVTETDVDLAAASNAVVIGFNTTLASGSRASADQTGVDIREYNIIYKLLDDIEGAMEGLLEPELVEEPLGQAQVRAVFPVGKGFVAGCYVQSGKLIRNCKIRVLRSGNLVHSGTLNSLKRIKEDAREVNAGYECGIRLDDFQGWAEGDQIEAYQMVTKRRT 1000
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_TRIEI (Translation initiation factor IF-2 OS=Trichodesmium erythraeum (strain IMS101) GN=infB PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.285e-54 Identity = 101/201 (50.25%), Postives = 146/201 (72.64%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGSIEA+ AL+ LPQ V L+ LL G+++ +D+DLA AS+A+I+GFN + AD GV++R Y VIY L+DD++ AMEGLL+ + P+G EVRA+F+ G VAGC V GK+V+ C +RV R+G+ V+ G+LDSLRR+K++VKEVNAG ECGV ++++W EGDIIEA+ + ++R Sbjct: 855 LKELNLILKGDVQGSIEAIVAALRQLPQKEVQLRLLLSGAGEVTETDIDLAAASEAVIIGFNTTMASGARQAADAAGVDVREYNVIYKLLDDIQGAMEGLLDPELIEEPLGQVEVRAVFTINRGAVAGCYVLSGKVVRNCKVRVRRNGEIVYQGILDSLRRMKDDVKEVNAGYECGVSFDNFNNWSEGDIIEAYQMVTKRR 1055
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_SYNP6 (Translation initiation factor IF-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=infB PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 7.317e-54 Identity = 101/202 (50.00%), Postives = 141/202 (69.80%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ +L+ LPQ V ++ LL A G+I+ +DVDLA AS A+I+GFN K AD GV++R Y +IY L++D++ AMEGLLE + P+G EVRA+FS G G VAGC V GK ++ C IRV R V+ G LDSL+R+KE+VKEVN+G ECG+G + W+EGDIIE + + ++RT Sbjct: 826 LKELNLILKADVQGSVEAILGSLEQLPQKQVQVRVLLAAPGEITETDVDLAAASGAVIVGFNTTLASGAKRAADEAGVDVRDYDIIYKLLEDIQAAMEGLLEPELVEEPLGQVEVRAVFSIGRGAVAGCYVQSGKAIRNCNIRVRRGSNLVYTGTLDSLKRMKEDVKEVNSGYECGIGLDSFSAWQEGDIIETYRMVTKRRT 1027
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_SYNE7 (Translation initiation factor IF-2 OS=Synechococcus elongatus (strain PCC 7942) GN=infB PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 7.317e-54 Identity = 101/202 (50.00%), Postives = 141/202 (69.80%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ +L+ LPQ V ++ LL A G+I+ +DVDLA AS A+I+GFN K AD GV++R Y +IY L++D++ AMEGLLE + P+G EVRA+FS G G VAGC V GK ++ C IRV R V+ G LDSL+R+KE+VKEVN+G ECG+G + W+EGDIIE + + ++RT Sbjct: 826 LKELNLILKADVQGSVEAILGSLEQLPQKQVQVRVLLAAPGEITETDVDLAAASGAVIVGFNTTLASGAKRAADEAGVDVRDYDIIYKLLEDIQAAMEGLLEPELVEEPLGQVEVRAVFSIGRGAVAGCYVQSGKAIRNCNIRVRRGSNLVYTGTLDSLKRMKEDVKEVNSGYECGIGLDSFSAWQEGDIIETYRMVTKRRT 1027 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |