EY660366

Overview
NameEY660366
Unique NameEY660366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660366_ssr81 microsatellite EY660366_ssr81:81..107. BLAST: Citrus ESTs to Prunus persica proteins V1
EY660366_ssr103 microsatellite EY660366_ssr103:103..114. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..904. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 400.593 bits (1028), Expect = 6.408e-111
Identity = 195/221 (88.24%), Postives = 207/221 (93.67%), Query Frame = 3
Query:  156 HHGKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIY 818
            HHGKDYVDPPPAPL+DM ELK WSFYRALIAEF+ATLLFLYV+VATVIGHKKQ+  C GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ YM+AQCLGAICGVG VKAFMK  YN+LGGGANTVA GY+KG+ALGAEIIGTFVLVYTVFSATDPKRSARDSH+PVLAPLPIGFAVFM HLATIPITGTG +PA SFGAA IY
Sbjct:   12 HHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY 232          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 1.208e-109
Identity = 197/220 (89.55%), Postives = 205/220 (93.18%), Query Frame = 3
Query:  159 HGKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIY 818
            HGKDYVDPPPAPL+DMAELKLWSFYRA+IAEF+ATLLFLYV+VATVIGHK Q+  CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL RAVAYMVAQCLGAICGVGLVKAFM   Y  LGGGANTVA GY+ G+ALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFM HLATIPITGTG +PA SFGAA IY
Sbjct:   11 HGKDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY 230          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 3.291e-107
Identity = 187/226 (82.74%), Postives = 203/226 (89.82%), Query Frame = 3
Query:  153 HHHGKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIYTMTR 830
            H HGKDYVDPPPAP  DM ELKLWSF+RA IAEF+ATLLFLY++VATVIG+KK++D C  VGLLGIAW+FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ YM+AQC GAICGVGLVKAFMK  YN  GGGAN+VA GYNKG+A GAE+IGTFVLVYTVFSATDPKRSARDSHVP+LAPLPIGFAVFM HLATIPITGTG +PA SFGAA IY   R
Sbjct:   13 HQHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKR 238          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 369.007 bits (946), Expect = 2.066e-101
Identity = 183/228 (80.26%), Postives = 200/228 (87.72%), Query Frame = 3
Query:  153 HHHGKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQS--DACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIYTMTR 830
            H   KDY DPPPAPL D+ EL+LWSFYRALIAEF+ATLLFLY++VATVIG+K QS  D CGGVG LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKVS+IRAV Y+VAQCLG I GVG+VK  MKH+YN+ GGGAN VASGY+ G+ALGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFM HLATIPITGTG +PA S GAA IY   +
Sbjct:   11 HVRPKDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKK 238          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 363.229 bits (931), Expect = 1.134e-99
Identity = 180/231 (77.92%), Postives = 201/231 (87.01%), Query Frame = 3
Query:  165 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIYTMTRP 833
            KDY DPPPAPLID AEL  WS YRA+IAEF+ATLLFLY++VATVIG+K Q+DA        CGGVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y+VAQCLGAICGVGLVKAF    ++  GGGAN++ASGY++G+ LGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFM HLATIP+TGTG +PA S GAA IY   +P
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKP 249          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.481e-99
Identity = 178/233 (76.39%), Postives = 201/233 (86.27%), Query Frame = 3
Query:  165 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA----------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIYTMTRP 833
            KDY DPPPAPL+D AEL  WS YRA+IAEF+ATLLFLYV+VATVIG+K Q+DA          CGGVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ YMVAQCLGA+CGVGLVKAF    ++  GGGAN++ASGY++G+ LGAEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFM HLATIP+TGTG +PA S GAA +Y   +P
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKP 251          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 5.626e-99
Identity = 179/226 (79.20%), Postives = 198/226 (87.61%), Query Frame = 3
Query:  165 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIY 818
            KDY DPPPAPLID AEL  WS YRA+IAEF+ATLLFLY++VATVIG+K Q+DA        CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y+VAQCLGAICGVGLVKAF    +N  GGGANT+A+GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFM HLATIPITGTG +PA S GAA I+
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIF 244          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 2.138e-98
Identity = 179/229 (78.17%), Postives = 196/229 (85.59%), Query Frame = 3
Query:  165 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIYTMTRP 833
            +DY DPPPAP ID AELK WSFYRA+IAEFVATLLFLY++V TVIG+K QSD       CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL RA+ Y++AQCLGAICGVG VKAF    Y   GGGAN++A GY+ G+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFM HLATIPITGTG +PA SFGAA IY  ++P
Sbjct:   16 RDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKP 244          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 8.124e-98
Identity = 177/229 (77.29%), Postives = 196/229 (85.59%), Query Frame = 3
Query:  156 HHGKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIY 818
            H GKDY DPPPAPL+D  EL  WS YRA+IAEFVATLLFLY++VATVIG+K Q+DA        CGGVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARKVSL+RA+ Y+VAQCLGAICGVGLVK F    Y   GGGAN +++GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFM HLATIPITGTG +PA S GAA IY
Sbjct:   11 HEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY 239          
BLAST of EY660366 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 356.681 bits (914), Expect = 1.061e-97
Identity = 178/229 (77.73%), Postives = 193/229 (84.28%), Query Frame = 3
Query:  165 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMGHLATIPITGTGHHPAXSFGAAGIYTMTRP 833
            +DY DPPP P  D  EL  WS YRA+IAEFVATLLFLY++V TVIG+K QSD       CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLIRAV YMVAQCLGAICGVG VKAF    Y+  GGGAN++A GYN G+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFM HLATIPITGTG +PA SFGAA IY  ++P
Sbjct:   14 RDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKP 242          
The following BLAST results are available for this feature:
BLAST of EY660366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
PIP27_ARATH6.408e-11188.24Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP28_ARATH1.208e-10989.55Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP1_ATRCA3.291e-10782.74Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP26_ORYSJ2.066e-10180.26Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP21_MAIZE1.134e-9977.92Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP22_MAIZE1.481e-9976.39Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_ORYSJ5.626e-9979.20Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP21_ARATH2.138e-9878.17Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP25_MAIZE8.124e-9877.29Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP22_ARATH1.061e-9777.73Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660366 ID=EY660366; Name=EY660366; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGAGCTTTTCTCGAGACCAGAGAGGGTGTGTGCTTTTCTTT
GATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAAGA
AGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACAAACTCACC
GCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCACCACTCATT
GACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTCATAGCCGA
GTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCACTGTCATTG
GCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTTTGGGTATT
GCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGCACCGCTGG
CATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTTGG
CAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGTGC
TTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCATGA
GTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAACA
AAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTGTTTAC
ACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCACGT
GCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGGTCACT
TGGCCACCATCCCCATCACTGGAACGGGGCATCACCCTGCTANGAGCTTT
GGTGCTGCTGGTATCTACACAATGACAAGGCCTGGGATGACCATTGGATC
TTCTGGGGTGGTCCTTTCGNTGGAGCATTGGCTGCAGCGGCATACACCAG
TACAT
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