EY660349

Overview
NameEY660349
Unique NameEY660349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.462e-82
Identity = 142/176 (80.68%), Postives = 160/176 (90.91%), Query Frame = 2
Query:   14 TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP 541
            TG DY+DNQLRFSLLCQAALEAPR+LNLNS+KYFSGPYGEDV+FVANDWH++LIPCYLK+MYK +G+YK+AKV FCIHNIAYQGR AF DF LLNLP +F+SSFDFIDGYNKP  G+KINWMKAGILESD V TVSPHYA+EL SGE++GVELDNIIR TGI GIVNGMD +E +P
Sbjct:  181 TGIDYRDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVIFVANDWHSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFSDFSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDRGVELDNIIRSTGIIGIVNGMDNREWSP 356          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.030e-80
Identity = 150/206 (72.82%), Postives = 169/206 (82.04%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIY-RCQYDASL*W-MRSSSEEALQQKVG 628
            G DYQDNQLRFSLLC AALEAPR+LNLNS+K FSGPYGE+V F+ANDWHT+L+PCYLK +Y+P G+YK AKV FCIHNIAYQGRFAF DF  LNLP +FKSSFDFIDGY KPV+GRKINWMKAGILESD VLTVSP+YAQE+ SG E+GVELDN IRKTGI GI+NGMDVQE  P    Y    YDA+     +   +EALQ +VG
Sbjct:  187 GLDYQDNQLRFSLLCLAALEAPRVLNLNSSKNFSGPYGEEVAFIANDWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFIDGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIINGMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVG 392          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.139e-79
Identity = 141/180 (78.33%), Postives = 153/180 (85.00%), Query Frame = 2
Query:    2 HASGTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP 541
            +    G DYQDNQLRFSLLCQAALEAPR+LNL S+KYFSGPYGEDVVFVANDWHT+L+PCYLK+MY+ KGMY  AKV FCIHNIAYQGRF   DF LLNLP QFKSSFDF DGY KPV+GRKINWMKAGILESD V+TVSP+YA EL SG E+GVELDN+I KT I GIVNGMD QE  P
Sbjct:  182 YGPNAGTDYQDNQLRFSLLCQAALEAPRVLNLTSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDGYEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNGMDTQEWNP 361          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2)

HSP 1 Score: 287.73 bits (735), Expect = 5.290e-77
Identity = 143/206 (69.42%), Postives = 166/206 (80.58%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIY-RCQYD-ASL*WMRSSSEEALQQKVG 628
            G+DY+DNQLRFSLLCQAALEAPR+LNLNS+ YFSGPYGEDVVFVANDWHT+L+PCYLKTMY+ +G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFIDGY+KPV+GRKINWMKAGI E+D V TVSP+YA+EL S   +GVELDN IR  GI GI NGMD QE  P    Y   +YD  ++   +   +EALQ  VG
Sbjct:  187 GKDYKDNQLRFSLLCQAALEAPRVLNLNSSNYFSGPYGEDVVFVANDWHTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFIDGYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICNGMDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVG 392          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.909e-77
Identity = 142/207 (68.60%), Postives = 168/207 (81.16%), Query Frame = 2
Query:   14 TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIY-RCQYD-ASL*WMRSSSEEALQQKVG 628
            TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYGEDVVFVANDWHT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP  FKSSFDF+DGY KPV+GRKINWMKA ILE+  VLTVSP+YAQEL SG ++GVEL   +R   + GI+NGMDVQE  P    Y   +YD  ++   +   +EALQ  VG
Sbjct:  188 TGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVG 394          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.010e-76
Identity = 141/206 (68.45%), Postives = 167/206 (81.07%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIY-RCQYD-ASL*WMRSSSEEALQQKVG 628
            G DY+DNQ RFSLLCQAALEAPRILNLN+N YFSGPYGEDVVFV NDWHT L+ CYLK+ Y+  G+Y++AKV FCIHNI+YQGRF+F+DF  LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+YA+EL SGE +G ELDNI+R TGI GIVNGMDV E  P    +    YD  +    ++ ++EALQ +VG
Sbjct:  181 GTDYEDNQQRFSLLCQAALEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALNKEALQAEVG 386          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.478e-76
Identity = 140/206 (67.96%), Postives = 168/206 (81.55%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIYR-CQYD-ASL*WMRSSSEEALQQKVG 628
            G DY DN+LRFSLLCQAALEAP++LNLNS+ YFSGPYGEDV+F+ANDWHT+LIPCYLK+MY+ +G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDGY KPV+GRKINWMKAGILES  V+TVSP+YAQEL S  ++GVELD+++RKT I GIVNGMD QE  P    Y   +YD  ++   +   +EALQ  VG
Sbjct:  186 GLDYLDNELRFSLLCQAALEAPKVLNLNSSNYFSGPYGEDVLFIANDWHTALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGYEKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGMDTQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVG 391          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.702e-75
Identity = 143/206 (69.42%), Postives = 163/206 (79.13%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIY-RCQYDAS-L*WMRSSSEEALQQKVG 628
            G DY+DNQLRFSLLCQAALEAPRIL+LN+N YFSGPYGEDVVFV NDWHT  + CYLK+ Y+  G+YK AK  FCIHNI+YQGRFAF DF  LNLP +FKSSFDFIDGY KPV GRKINWMKAGILE+D VLTVSP+YA+EL SG  +G ELDNI+R TGI GIVNGMDV E  P    Y   +YD S     ++ ++EALQ +VG
Sbjct:  187 GTDYKDNQLRFSLLCQAALEAPRILSLNNNPYFSGPYGEDVVFVCNDWHTGPLSCYLKSNYQSNGIYKDAKTAFCIHNISYQGRFAFSDFPELNLPERFKSSFDFIDGYEKPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYIAVKYDVSTAVEAKALNKEALQAEVG 392          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.103e-74
Identity = 141/206 (68.45%), Postives = 163/206 (79.13%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIY-RCQYDAS-L*WMRSSSEEALQQKVG 628
            G DY+DNQLRFSLLCQAALEAPRIL+LN+N YFSGPYGEDVVFV NDWHT  + CYLK+ Y+  G+Y+ AK  FCIHNI+YQGRFAF D+  LNLP +FKSSFDFIDGY KPV GRKINWMKAGILE+D VLTVSP+YA+EL SG  +G ELDNI+R TGI GIVNGMDV E  P    Y   +YD S     ++ ++EALQ +VG
Sbjct:  182 GTDYRDNQLRFSLLCQAALEAPRILSLNNNPYFSGPYGEDVVFVCNDWHTGPLSCYLKSNYQSHGIYRDAKTAFCIHNISYQGRFAFSDYPELNLPERFKSSFDFIDGYEKPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSRDKYIAVKYDVSTAVEAKALNKEALQAEVG 387          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.053e-73
Identity = 138/207 (66.67%), Postives = 163/207 (78.74%), Query Frame = 2
Query:   14 TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTGIXGIVNGMDVQE*TP*LTIY-RCQYDA-SL*WMRSSSEEALQQKVG 628
            TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G YGEDVVFV NDWHT  +  YLK  Y+P G+Y++AKV FCIHNI+YQGRFAFED+  LNL  +F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL SG  +G ELDNI+R TGI GIVNGMDV E  P    Y   +YDA +    ++ ++EALQ + G
Sbjct:  187 TGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAG 393          
The following BLAST results are available for this feature:
BLAST of EY660349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
SSG1_PEA5.462e-8280.68Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_MANES1.030e-8072.82Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ANTMA1.139e-7978.33Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_IPOBA5.290e-7769.42Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ARATH6.909e-7768.60Probable granule-bound starch synthase 1, chloropl... [more]
SSG1_HORVU2.010e-7668.45Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_SOLTU4.478e-7667.96Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_SORBI1.702e-7569.42Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_MAIZE1.103e-7468.45Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ORYSJ6.053e-7366.67Granule-bound starch synthase 1, chloroplastic/amy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660349 ID=EY660349; Name=EY660349; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTTGTTCTGG
TGAAGAACAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTA
ANGGAATTGTGAACGGGATGGATGTCCAGGAGTGAACCCCTTGACTGACA
ATATATAGGTGTCAATATGATGCTTCACTGTGATGGATGCGAAGCTCTTC
TGAGGAAGCCCTCCAGCAGAAAGTGGGTGCCTGTCGATAGAATATTCTGT
CATAGGCTCATTGGTAGACTGAAGAGCAGAAGGCTCGATATTCTTGAGCT
GCATTCCCATTTCTCAAGAGATGTCAGATATAGTCCTGGACTGGCAAAAA
CCATGGAGAGCAGCTTGACAAGTTGAGAACTGTACCTGAGAAAGCAGAGA
GTACGAATTCATATTCTCTGCGCTATGAAAT
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