EY660272

Overview
NameEY660272
Unique NameEY660272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.122e-63
Identity = 102/119 (85.71%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSGILQQLDYGLVQCQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I  AG HV+VGT
Sbjct:   47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGT 165

HSP 2 Score: 59.6918 bits (143), Expect = 4.122e-63
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MA  AP+G Q +ARQ D+K N+  A +G+D  TSYDEVYDSFDA+G
Sbjct:    1 MARLAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.191e-62
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSG+LQQLDY LV+CQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I Q+G HVVVGT
Sbjct:   47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGT 165

HSP 2 Score: 60.4622 bits (145), Expect = 1.191e-62
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ D K  E   TE ++  TSYDEVYDSFDA+G
Sbjct:    1 MAGSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDSFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.026e-62
Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSGILQQLDY LV+CQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I Q+G HVVVGT
Sbjct:   47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGT 165

HSP 2 Score: 59.3066 bits (142), Expect = 2.026e-62
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ D K  E   TE Q+  TSYDEVY+SFDA+G
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.026e-62
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSG+LQQLDY LV+CQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I Q+G HVVVGT
Sbjct:   47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGT 165

HSP 2 Score: 59.6918 bits (143), Expect = 2.026e-62
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ D K  E   TE ++  TSYDEVYDSFDA+G
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.026e-62
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSG+LQQLDY LV+CQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I Q+G HVVVGT
Sbjct:   47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGT 165

HSP 2 Score: 59.6918 bits (143), Expect = 2.026e-62
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ D K  E   TE ++  TSYDEVYDSFDA+G
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.026e-62
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSG+LQQLDY LV+CQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I Q+G HVVVGT
Sbjct:   47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGT 165

HSP 2 Score: 59.6918 bits (143), Expect = 2.026e-62
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ D K  E   TE ++  TSYDEVYDSFDA+G
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.028e-62
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSG+LQQLDY LV+CQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I Q+G HVVVGT
Sbjct:   47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGT 165

HSP 2 Score: 59.6918 bits (143), Expect = 2.028e-62
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ D K  E   TE ++  TSYDEVYDSFDA+G
Sbjct:    1 MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.298e-61
Identity = 97/119 (81.51%), Postives = 105/119 (88.24%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSGILQQL Y L++CQ LVLAPTRELA  IEKVMRALGDYLG K  AC GGTSVRED+ I  +G HVVVGT
Sbjct:   47 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLAYELLECQALVLAPTRELAQQIEKVMRALGDYLGVKVTACVGGTSVREDQRILSSGVHVVVGT 165

HSP 2 Score: 67.3958 bits (163), Expect = 1.298e-61
Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ DTK NE  + +GQD  TSYDEVYDSFDA+G
Sbjct:    1 MAGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.891e-61
Identity = 98/119 (82.35%), Postives = 106/119 (89.08%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            L+ENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSGILQQLDY L+ CQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I  +G HVVVGT
Sbjct:   47 LKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELLDCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGT 165

HSP 2 Score: 60.8474 bits (146), Expect = 4.891e-61
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ D+K  E    EGQD  TSYDEVY SFDA+G
Sbjct:    1 MAGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHSFDAMG 46
[Close]
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.843e-60
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:  324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680
            LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSG+LQQLD+ L+QCQ LVLAPTRELA  IEKVMRALGDYLG K HAC GGTSVRED+ I QAG HVVVGT
Sbjct:   46 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGT 164

HSP 2 Score: 52.7582 bits (125), Expect = 1.843e-60
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 2 
Query:  185 MAGKAPEGXQPEARQXDTKKNEPXATEGQD-XXTSYDEVYDSFDALG 322
            MAG APEG Q +ARQ D K NE    EGQD   TSYD+V++SFDA+G
Sbjct:    1 MAGSAPEGTQFDARQFDQKLNE--VLEGQDEFFTSYDDVHESFDAMG 45
The following BLAST results are available for this feature:
BLAST of EY660272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
IF4A8_TOBAC4.122e-6385.71Eukaryotic initiation factor 4A-8 OS=Nicotiana tab... [more]
IF4A2_NICPL1.191e-6284.03Eukaryotic initiation factor 4A-2 OS=Nicotiana plu... [more]
IF411_TOBAC2.026e-6284.87Eukaryotic initiation factor 4A-11 OS=Nicotiana ta... [more]
IF4A7_TOBAC2.026e-6284.03Eukaryotic initiation factor 4A-7 OS=Nicotiana tab... [more]
IF414_TOBAC2.026e-6284.03Eukaryotic initiation factor 4A-14 OS=Nicotiana ta... [more]
IF410_TOBAC2.026e-6284.03Eukaryotic initiation factor 4A-10 OS=Nicotiana ta... [more]
IF413_TOBAC2.028e-6284.03Eukaryotic initiation factor 4A-13 (Fragment) OS=N... [more]
IF415_TOBAC1.298e-6181.51Eukaryotic initiation factor 4A-15 OS=Nicotiana ta... [more]
IF4A9_TOBAC4.891e-6182.35Eukaryotic initiation factor 4A-9 OS=Nicotiana tab... [more]
IF4A1_ARATH1.843e-6084.03Eukaryotic initiation factor 4A-1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660272 ID=EY660272; Name=EY660272; organism=Citrus sinensis; type=EST; length=933bp
TGTGGTACGCCTGAGGNACTGGTCCGGATTCTTTCANCAGGGGGGCGNCC
GCCACGGCGTGACAAGAGGAGGGTGTNAACCCNAGGAACAANANGCAGCA
AAAGAAAGAGGTGTGTCTCCAAAGAGAGAGGGAAAACCAACNCGNNCNCG
CGAAGANAANCACCAGCAGCAAAGCAGGGCAGAGATGGCTGGAAAGGCAC
CCGAAGGANCACAACCCGAAGCACGNCAGNAGGACACCAAGAAGAACGAA
CCGGNCGCGACGGAGGGGCAAGACCNCNNCACTTCTTATGATGAAGTTTA
TGACAGTTTTGATGCATTGGGTACTGCAGGAAAACCTTTTGAGGGGAATC
TATGCTTTTGGGTTTGAGAAGCCCTCTGCTAGTGAGGAAAGGGGAATTGT
TCCCTTCTGCAAGGGACTTGACGTCATTCAGCAGGCTCAGGCTGGAACTG
GGAAAACAGCAACTTTCTGCTCTGGAATTTTGCAGCAACTTGATTATGGG
CTTGTCCAATGTCAGGGCCTGGTATTGGCACCCACTAGGGAACTAGCTGG
ACTGATTGAGAAAGTAATGAGGGCACTTGGCGATTATCTTGGGGGCAAGG
GTCATGCTTGTGGTGGTGGGACAAGTGTTCGCGAGGATAAGGGGATTTGT
CAAGCTGGGGGTCATGTGGTTGTTGGGACTCCTGGGGCGAGGGGTTGAAA
TGCTGCGCCGTGAGGTTTTAGCGCCCGGATTAATTTAACATGGTTGGACT
GGATGGGAGGTGATGAAAGGCTGTTCCCGGGTTGTAGGGTCGGATTTTTG
ATATTGTTGCGGAGGGTTGGGGGTAAGGTGAGGGGGGGGTCTCTCTGGGA
AATGGGTTCGGGGGGCCGGGGGATTGAGGGGAGTTGATGGAAAAGCTGGA
AGGATTTGGGGTAATGGGGGGAAATGCCCGTAG
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