EY660270

Overview
NameEY660270
Unique NameEY660270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 3.540e-75
Identity = 124/169 (73.37%), Postives = 139/169 (82.25%), Query Frame = 1
Query:   34 FNTQVSDLCFAKKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 534
            ++ Q +     K D EQRVNLWFDP+ D H YTILW+H HIVFYVDDVPIR YKN+      +P +QPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EARRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct:  124 YSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 2.805e-72
Identity = 119/171 (69.59%), Postives = 138/171 (80.70%), Query Frame = 1
Query:   34 FNTQVSDLCFAKKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 540
            +  Q +     K D EQRVNLWFDP+ D H Y I WNH  IVFYVD+VPIRVYKN+   + P+P  QPMGVYSTLWEADDWATRGG+EKI+WS+APFYAYY+DFDIEGCPVPGPA+C +N  NWWE + Y  L+ +EAR YRWVR+NHM+YDYCTDKSR+PVPPPEC AGI
Sbjct:  123 YTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPECSAGI 293          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.722e-50
Identity = 87/153 (56.86%), Postives = 109/153 (71.24%), Query Frame = 1
Query:   79 EQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            EQR+NLWFDP+ D H Y++LWN + IVF+VDDVPIRV+KNS      FP NQPM +YS+LW ADDWATRGGLEK +W KAPF A YR F ++GC     A  C +    WW+   +Q L A + +R +WVR  + IY+YCTD+ R+PVPPPEC
Sbjct:  135 EQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 8.218e-48
Identity = 85/159 (53.46%), Postives = 108/159 (67.92%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            K + EQR+ LWFDP    H Y++LWN + IV +VDDVPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK +W+ APF A Y  F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + +Y+YCTDK+RYPVPPPEC
Sbjct:  132 KGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.391e-47
Identity = 86/159 (54.09%), Postives = 104/159 (65.41%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            K D EQR+ LWFDP    H Y++LWN   IV +VDDVPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK DWS APF A Y  F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + IY+YCTD+ RYP  PPEC
Sbjct:  131 KGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.644e-46
Identity = 87/158 (55.06%), Postives = 108/158 (68.35%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 528
            K D EQR+ LWFDP  + H Y+ILWN + IVF+VD+VPIRV+KNS      FP +QPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A + RR RWVR  + IY+YCTD  RYP + PPEC
Sbjct:  132 KGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.453e-46
Identity = 85/157 (54.14%), Postives = 102/157 (64.97%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            K D EQR+ LWFDP  D H Y++LWN + I F+VDD PIRV+KNS      +P +QPM +YS+LW ADDWATRGG EK DWSKAPF A YR F ++GC     A  CA+    WW+   +Q L A + RR  WVR  H IY+YCTD  RY    PEC
Sbjct:  131 KGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.889e-46
Identity = 83/157 (52.87%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            K D EQR+ LWFDP    H Y++LWN + IVF VD++PIRV+KN       FP NQPM VY++LW ADDWATRGGLEK DWSKAPF A Y+ F ++GC     +  CA+    WW+   ++ L + + RR +WVR    IY+YCTD++RYP  PPEC
Sbjct:  131 KGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.691e-46
Identity = 83/157 (52.87%), Postives = 110/157 (70.06%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            K + EQR+ LWFDP+   H Y++LWN + IVF+VD++PIRV+KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A YR F I+GC     A  CA+    WW+ N ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  133 KGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289          
BLAST of EY660270 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.691e-46
Identity = 84/157 (53.50%), Postives = 104/157 (66.24%), Query Frame = 1
Query:   67 KKDFEQRVNLWFDPAADSHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 528
            K D EQR+ LWFDP    H Y++LWN + IVFYVDD PIRV+KNS      FP NQPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A + ++  WVR  + IY+YCTD+ RY   PPEC
Sbjct:  130 KGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286          
The following BLAST results are available for this feature:
BLAST of EY660270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH6_ARATH3.540e-7573.37Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH2.805e-7269.59Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH6.722e-5056.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC8.218e-4853.46Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC2.391e-4754.09Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN2.644e-4655.06Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT3.453e-4654.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN5.889e-4652.87Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB7.691e-4652.87Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTHA_PHAAN7.691e-4653.50Xyloglucan endotransglucosylase/hydrolase protein ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660270 ID=EY660270; Name=EY660270; organism=Citrus sinensis; type=EST; length=947bp
TCTGGTACCCTGCGGTACCTCGTCCGGAATTCCTTCAACACACAGGTGTC
CGATCTATGCTTTGCAAAAAAAGATTTTGAACAGAGAGTGAACCTCTGGT
TTGACCCTGCTGCAGACTCCCACCTTTACACAATTCTCTGGAACCATCAC
CATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAAACAG
TGGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATTCAACGC
TGTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAATAGAT
TGGAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGATATTGAGGG
CTGCCCAGTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGT
GGGAGGCAAATAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAGATAC
AGATGGGTTCGTCTCAACCACATGATCTATGATTATTGCACTGATAAATC
AAGATACCCAGTACCCCCACCGGAATGCCTTGCCGGCATATAAATTCAAC
CCGCCAATTAATTAAGCAGTTGGACGGGACTCCATATCCGGATCATATCA
TGTATATTACTTCACGTACACGTCCTTTGTATTATTCCCTATTCGTGTGA
AAAGACTTATACGCATTTCAAGGGGAGGGGCGGGAAGGGGAAAAAAACAT
TGGGGGGCTTTTTAATGTTATTTTGGGGAGGGGGAAATATGTGGGGTTTC
CTGGTCTGCCTTGGCCCTAAATTAAGCCTCGATTTGGATGCCACGTATTT
TTGTGCCATTAAAAGTTTCTTTCAAATTGGGAAAAAAAAAAAAAAAAAGC
CGGCGCGCTCTTAAAGGACCAAGCTTTACCACCCCGTGCATTGCCAGCTA
TTACCCTCTTAAAGTGGGCCCCTAAATTCAATTCACTGGGCCGCCTT
back to top