EY660268

Overview
NameEY660268
Unique NameEY660268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: XCT_ORYSJ (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. japonica GN=XCT PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.662e-49
Identity = 120/250 (48.00%), Postives = 132/250 (52.80%), Query Frame = 3 
Query:   21 GQPVALQFGSSTSEILETAFKNVSPGLVTREEYVEKRVNIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            GQP  LQFGSSTSEILETAFK  + GLVTRE+YVEKRVNIR                                G+ RLSF D+               + K     KLGKDPTVETSFLPD                        I+ EPL ITYSYWDG GHRRVIQ R GD+IGEFLRAVQQQLA EFRE+R                P    F      +++GK GPLFHFDVH+DVRTIADAT EK
Sbjct:   42 GQPGLLQFGSSTSEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKH-GPVKLGKDPTVETSFLPDREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEK 290
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: XCT_ORYSI (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. indica GN=XCT PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.662e-49
Identity = 120/250 (48.00%), Postives = 132/250 (52.80%), Query Frame = 3 
Query:   21 GQPVALQFGSSTSEILETAFKNVSPGLVTREEYVEKRVNIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            GQP  LQFGSSTSEILETAFK  + GLVTRE+YVEKRVNIR                                G+ RLSF D+               + K     KLGKDPTVETSFLPD                        I+ EPL ITYSYWDG GHRRVIQ R GD+IGEFLRAVQQQLA EFRE+R                P    F      +++GK GPLFHFDVH+DVRTIADAT EK
Sbjct:   42 GQPGLLQFGSSTSEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKH-GPVKLGKDPTVETSFLPDREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEK 290
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: XCT_ARATH (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana GN=XCT PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.107e-47
Identity = 117/246 (47.56%), Postives = 132/246 (53.66%), Query Frame = 3 
Query:   36 LQFGSSTSEILETAFKNVSPGLVTREEYVEKRVNIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GNSRLSFADDFXXXXXXXXXXXXXLKTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            LQFG+S+ EIL+TAFK  + GLVTREEYVEKRVNIRN                                G+SRLSFA+DF               T  L   KLGKDP+VET+FLPD                        I+ EPL+ITYSYWDG GHRRVIQ R GD IG FLRAVQQQLA +FREIR                P    F      +++GK GPLFHFDVH+DVRTIADATIEK
Sbjct:   49 LQFGTSSCEILDTAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQQEEEELQLEKRNKKRKIKGSSRLSFAEDFENGSDEDDGENKSSGTGNLRCGKLGKDPSVETNFLPDSEREAEEQAERERLKKQWLREQEQIKNEPLEITYSYWDGTGHRRVIQVRKGDPIGNFLRAVQQQLAPDFREIRTASVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATIEK 294
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: F50AA_XENLA (Protein FAM50A-A OS=Xenopus laevis GN=fam50a-A PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.524e-21
Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 3 
Query:  321 KRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            K+  + KLGK+P V+TSFLPD                        I+ E ++IT+SYWDG+GHRR ++ + G++I +FL+   + L  +F E+R+    +          P +  F      +++GK GPLF+FDVH+DVR ++DAT+EK
Sbjct:  150 KKKKKKKLGKNPDVDTSFLPDRDREEEENRLREELRQEWEHKQEKIKSEEIEITFSYWDGSGHRRTVKMKKGNSIQQFLQKALESLRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDATVEK 299
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: FA50A_HUMAN (Protein FAM50A OS=Homo sapiens GN=FAM50A PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.479e-20
Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 3 
Query:  339 KLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            KLGK+P V+TSFLPD                        I+ E ++IT+SYWDG+GHRR ++ R G+T+ +FL+   + L  +F E+R+    +          P +  F      +++GK GPLF+FDVH DVR ++DAT+EK
Sbjct:  155 KLGKNPDVDTSFLPDRDREEEENRLREELRQEWEAKQEKIKSEEIEITFSYWDGSGHRRTVKMRKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEK 298
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: FA50B_MOUSE (Protein FAM50B OS=Mus musculus GN=Fam50b PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.238e-20
Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 3 
Query:  330 AQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            A+  LGK+P V+TSFLPD                        ++ E ++IT+SYWDG+GHRR ++   G T+ +FL+   Q L  +FRE+R     +          P Y  F      +++GK GPLF FDVH DVR ++DAT+EK
Sbjct:  147 AKKNLGKNPDVDTSFLPDREREEEENRLREELRQEWEAKREKVKGEEVEITFSYWDGSGHRRTVRMSKGSTVQQFLKRALQGLRRDFRELRAAGVEQLMYVKEDLILPHYHTFYDFIVAKARGKSGPLFSFDVHDDVRLLSDATMEK 293
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: FA50B_HUMAN (Protein FAM50B OS=Homo sapiens GN=FAM50B PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.238e-20
Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 3 
Query:  342 LGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            LGK+P V+TSFLPD                        ++ E +++T+SYWDG+GHRR ++ R G+T+ +FL+   Q L  +F E+R+    +          P Y  F      +++GK GPLF FDVH DVR ++DAT+EK
Sbjct:  142 LGKNPDVDTSFLPDRDREEEENRLREELRQEWEAQREKVKDEEMEVTFSYWDGSGHRRTVRVRKGNTVQQFLKKALQGLRKDFLELRSAGVEQLMFIKEDLILPHYHTFYDFIIARARGKSGPLFSFDVHDDVRLLSDATMEK 284
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: FA50A_XENTR (Protein FAM50A OS=Xenopus tropicalis GN=fam50a PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.228e-20
Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 3 
Query:  339 KLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            KLGK+P V+TSFLPD                        I+ E ++IT+SYWDG+GHRR ++ + G++I +FL+   + L  +F E+R+    +          P +  F      +++GK GPLF+FDVH+DVR ++DAT+EK
Sbjct:  166 KLGKNPDVDTSFLPDRDREEEENRLREELRQEWERKQEKIKSEEIEITFSYWDGSGHRRTVKMKKGNSIQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDATVEK 309
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: F50AB_XENLA (Protein FAM50A-B OS=Xenopus laevis GN=fam50a-B PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.228e-20
Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 3 
Query:  315 KTKRLAQAKLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            K K+  + +LGK+P V+TSFLPD                        I+ E ++IT+SYWDG+GHRR ++ + G++I +FL+   + L  +F E+R+    +          P +  F      +++GK GPLF+FDVH+DVR ++DA++EK
Sbjct:  151 KKKKKKKQQLGKNPDVDTSFLPDRDREEEENRLREELRQEWERKQEKIKSEEIEITFSYWDGSGHRRTVKMKKGNSIQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDASVEK 302
[Close]
BLAST of EY660268 vs. ExPASy Swiss-Prot
Match: FA50A_MOUSE (Protein FAM50A OS=Mus musculus GN=Fam50a PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.523e-20
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 3 
Query:  339 KLGKDPTVETSFLPDXXXXXXXXXXXXXXXXXXXXXXXXIRYEPLQITYSYWDGAGHRRVIQGR*GDTIGEFLRAVQQQLALEFREIRNNVRGKFALCLGRSYHPSYTQFL*AYC*QSQGKRGPLFHFDVHKDVRTIADATIEK 770
            KLGK+P V+TSFLPD                        I+ E ++IT+SYWDG+GHRR ++ + G+T+ +FL+   + L  +F E+R+    +          P +  F      +++GK GPLF+FDVH DVR ++DAT+EK
Sbjct:  155 KLGKNPDVDTSFLPDRDREEEENRLREELRQEWEAKQEKIKSEEIEITFSYWDGSGHRRTVKMKKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEK 298
The following BLAST results are available for this feature:
BLAST of EY660268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
XCT_ORYSJ5.662e-4948.00Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa ... [more]
XCT_ORYSI5.662e-4948.00Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa ... [more]
XCT_ARATH3.107e-4747.56Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis t... [more]
F50AA_XENLA6.524e-2136.00Protein FAM50A-A OS=Xenopus laevis GN=fam50a-A PE=... [more]
FA50A_HUMAN2.479e-2037.50Protein FAM50A OS=Homo sapiens GN=FAM50A PE=1 SV=2[more]
FA50B_MOUSE3.238e-2037.41Protein FAM50B OS=Mus musculus GN=Fam50b PE=2 SV=1[more]
FA50B_HUMAN3.238e-2037.06Protein FAM50B OS=Homo sapiens GN=FAM50B PE=2 SV=1[more]
FA50A_XENTR4.228e-2036.81Protein FAM50A OS=Xenopus tropicalis GN=fam50a PE=... [more]
F50AB_XENLA4.228e-2034.87Protein FAM50A-B OS=Xenopus laevis GN=fam50a-B PE=... [more]
FA50A_MOUSE5.523e-2036.81Protein FAM50A OS=Mus musculus GN=Fam50a PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-D02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660268 ID=EY660268; Name=EY660268; organism=Citrus sinensis; type=EST; length=945bp
TTGCTCGACCCACGCGTCCGGGCCAGCCCGTGGCTCTCCAGTTTGGTTCA
AGTACCTCCGAGATTCTAGAAACTGCGTTTAAGAATGTTTCCCCCGGTTT
AGTCACCAGAGAGGAATACGTTGAGAAGAGGGTTAATATTCGGAACAAGA
TTGAAGAGGAAGAAAAGGAGAAGCTTCAGAAGCTACTACAAGAGGAAGAG
GAGCTGCAATTGGAAAAGCGTAAAAAGCGAAAGATTAAGGGAAATTCTCG
ATTATCATTTGCTGATGATTTTGAGAGTGAAAATGAAGAGGAGAATGGAG
AAAGTGAAAATTTGAAAACAAAGAGGCTTGCGCAAGCGAAATTGGGAAAA
GATCCAACAGTGGAGACTAGCTTTTTGCCTGACAGTGAGAGAGAGGCAGA
GGAGCAATCTGAGCGTGAACGGTTGCAGCGACAGTGGCTTCGTGAGCAGG
AGCAAATTCGATATGAACCCCTTCAAATCACTTATAGTTATTGGGATGGA
GCAGGCCATAGACGAGTTATCCAGGGTCGGTAGGGTGATACAATAGGAGA
GTTTCTTCGGGCTGTTCAACAACAACTTGCACTTGAGTTTCGAGAAATCC
GAAACAACGTCAGGGGAAAATTTGCTTTATGTTTAGGAAGATCTTATCAT
CCCTCATACACACAGTTTTTATGAGCTTATTGTTAACAAAGCCAGGGAAA
AAGGGGACCGCTTTTTCACTTTGATGTTCACAAGGATGTTCGGACGATTG
CTGATGCCACTATAGAAAAGATGATTCCATGCTGGGAAAATTGGGGAAAG
GACTGGATGAAAAAAAAAAAAATTTCCTCCTGCTTCTCGAGGGAGGTTTT
GACCAACAAAAATTGGGGGCTACCCCCTCCTGGGGTTTGTCAGCCAGTGT
TGGAAATAATTTTCTAAAACATTGGTTTTTTCGTGGCGGAATAAT
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