EY660261

Overview
NameEY660261
Unique NameEY660261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.509e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 149

HSP 2 Score: 27.7202 bits (60), Expect = 1.509e-18
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESRTN 601
            GLI G+ILSSR G+SR +
Sbjct:  148 GLIVGIILSSRAGQSRAD 165
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.509e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 149

HSP 2 Score: 27.7202 bits (60), Expect = 1.509e-18
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESRTN 601
            GLI G+ILSSR G+SR +
Sbjct:  148 GLIVGIILSSRAGQSRAD 165
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.509e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 149

HSP 2 Score: 27.7202 bits (60), Expect = 1.509e-18
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESRTN 601
            GLI G+ILSSR G+SR +
Sbjct:  148 GLIVGIILSSRAGQSRAD 165
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.510e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   27 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 148

HSP 2 Score: 27.7202 bits (60), Expect = 1.510e-18
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESRTN 601
            GLI G+ILSSR G+SR +
Sbjct:  147 GLIVGIILSSRAGQSRAD 164
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL_TOBAC (V-type proton ATPase 16 kDa proteolipid subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.962e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 149

HSP 2 Score: 27.335 bits (59), Expect = 1.962e-18
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESR 595
            GLI G+ILSSR G+SR
Sbjct:  148 GLIVGIILSSRAGQSR 163
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.962e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 149

HSP 2 Score: 27.335 bits (59), Expect = 1.962e-18
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESR 595
            GLI G+ILSSR G+SR
Sbjct:  148 GLIVGIILSSRAGQSR 163
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.962e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   29 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 150

HSP 2 Score: 27.335 bits (59), Expect = 1.962e-18
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESR 595
            GLI G+ILSSR G+SR
Sbjct:  149 GLIVGIILSSRAGQSR 164
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.962e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   28 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 149

HSP 2 Score: 27.335 bits (59), Expect = 1.962e-18
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESR 595
            GLI G+ILSSR G+SR
Sbjct:  148 GLIVGIILSSRAGQSR 163
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL_SOLLC (V-type proton ATPase 16 kDa proteolipid subunit OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.964e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   27 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 148

HSP 2 Score: 27.335 bits (59), Expect = 1.964e-18
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESR 595
            GLI G+ILSSR G+SR
Sbjct:  147 GLIVGIILSSRAGQSR 162
[Close]
BLAST of EY660261 vs. ExPASy Swiss-Prot
Match: VATL1_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 OS=Arabidopsis thaliana GN=VHA-C1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.964e-18
Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  189 MGAALGTGKRGSPGGSMHQEGLELGVQYILPLCLG*ACGIEAIRIAVFIRTGDQP*EKVHYLLNGYRDVGAGLRCGLQELSADYGIGIDRGAGVTATAHKAEVFLGMMRVLIFDEGKELMDL 554
            MGAA GT K G    SM     EL ++ I+P+ +    GI  + IAV I TG  P  K +YL +GY  + +GL CGL  LSA   IGI   AGV A A + ++F+GM+ +LIF E   L  L
Sbjct:   27 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGL 148

HSP 2 Score: 27.335 bits (59), Expect = 1.964e-18
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  548 GLIAGLILSSRLGESR 595
            GLI G+ILSSR G+SR
Sbjct:  147 GLIVGIILSSRAGQSR 162
The following BLAST results are available for this feature:
BLAST of EY660261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
VATL_MESCR1.509e-1843.44V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_KALDA1.509e-1843.44V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU1.509e-1843.44V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PHAAU1.510e-1843.44V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_TOBAC1.962e-1843.44V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_GOSHI1.962e-1843.44V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH1.962e-1843.44V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL2_ARATH1.962e-1843.44V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL_SOLLC1.964e-1843.44V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL1_ARATH1.964e-1843.44V-type proton ATPase 16 kDa proteolipid subunit c1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660261 ID=EY660261; Name=EY660261; organism=Citrus sinensis; type=EST; length=905bp
TCATCAACCCACGTGTCCGTCAAGATCCTGACAAAAGAGAGAGGTTGGAC
ATCCAAAACCCGACCCAGACTCTCATCCTATCTGTGTTGCGCAACATGGA
AGGTGGAGGCGGCGTTACCAAGCGCCACACAATGCGACGGGGTACTTCCG
CTCTAGCGGCAACCTCTGCCCTCCATTCTCCTTTTCGTATGGGAGCTGCA
CTCGGAACCGGCAAGAGAGGCTCTCCAGGCGGATCTATGCACCAAGAAGG
GCTGGAGCTTGGGGTCCAGTATATCTTGCCCCTTTGCTTGGGTTGAGCGT
GCGGAATTGAAGCTATTAGAATTGCTGTTTTTATTCGGACCGGAGATCAG
CCATAGGAGAAAGTGCATTACCTTTTGAATGGTTACAGAGATGTCGGTGC
TGGCCTCAGATGTGGCCTACAAGAGCTCTCCGCTGATTATGGAATTGGGA
TCGACCGTGGTGCTGGTGTCACAGCTACTGCTCACAAGGCGGAGGTTTTC
CTTGGGATGATGCGCGTTCTGATCTTTGACGAAGGGAAGGAACTGATGGA
CTTATCGCCGGATTAATTCTGTCCTCCCGGCTTGGGGAGTCAAGGACCAA
CTAAAAGAGGGGGCATTGCTGGGTGGATCTATGGCCTGAAGGGTGCGAGC
GCCAAGGCCCTCGGTTTCTATCCCTGAGACGAGAGGTGCTACCTCTGCCC
AGGAACTCGTGGTTCTTTTTGGCACCAAGGAGTCTTAGCCGGGGTGGGAG
GTGTCTCCGGAACTGATTATCTTTCGATTGTTGGGGGAGGGCCAACTAAG
GATTGCTCCCCCCACTAAACCGGCTGGCGGAATTTGCTCAAGTAGGGGCT
AAGGCCCGACTTTTTAGGATCCTCTAAGAGGTGGGAATGCCCAACTAAAA
AAGAA
back to top