EY660242

Overview
NameEY660242
Unique NameEY660242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.600e-41
Identity = 82/185 (44.32%), Postives = 108/185 (58.38%), Query Frame = 1
Query:  265 NPPXXQXEYEKAHPXXXKXYCEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF*SYSAKTSLLEDFNFYGNKERAFHWQKKHKPG 819
            NP       +       K Y EDDIH+ IKY++W ST +GNK+LDA +     K        P++L FSVNGSG F G+AEM   VD+N     W  DKW G F V+W  +KDVPN+ LRHI LENNENKP  +SRDT E+ ++   ++LKI  SY   TS+ +DF+ Y  ++      KK + G
Sbjct:  399 NPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG-------PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQG 576          
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 7.600e-41
Identity = 82/185 (44.32%), Postives = 108/185 (58.38%), Query Frame = 1
Query:  265 NPPXXQXEYEKAHPXXXKXYCEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF*SYSAKTSLLEDFNFYGNKERAFHWQKKHKPG 819
            NP       +       K Y EDDIH+ IKY++W ST +GNK+LDA +     K        P++L FSVNGSG F G+AEM   VD+N     W  DKW G F V+W  +KDVPN+ LRHI LENNENKP  +SRDT E+ ++   ++LKI  SY   TS+ +DF+ Y  ++      KK + G
Sbjct:  399 NPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG-------PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQG 576          
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.600e-41
Identity = 82/185 (44.32%), Postives = 108/185 (58.38%), Query Frame = 1
Query:  265 NPPXXQXEYEKAHPXXXKXYCEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF*SYSAKTSLLEDFNFYGNKERAFHWQKKHKPG 819
            NP       +       K Y EDDIH+ IKY++W ST +GNK+LDA +     K        P++L FSVNGSG F G+AEM   VD+N     W  DKW G F V+W  +KDVPN+ LRHI LENNENKP  +SRDT E+ ++   ++LKI  SY   TS+ +DF+ Y  ++      KK + G
Sbjct:  400 NPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG-------PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQG 577          
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.872e-39
Identity = 78/173 (45.09%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  265 NPPXXQXEYEKAHPXXXKXYCEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF*SYSAKTSLLEDFNFYGNKE 783
            NP       +       K Y EDDIH+ IKY +W ST +GNK+LD  F    +K        P++L FSVNGSG F G+AEM   VD+      W  DKW G F VKW  +KDVPN  LRHI LENN+NKP  +SRDT E+ ++   ++LKI  SY   TS+ +DF+ Y  ++
Sbjct:  378 NPKEFDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKG-------PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQ 543          
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.585e-38
Identity = 77/173 (44.51%), Postives = 102/173 (58.96%), Query Frame = 1
Query:  265 NPPXXQXEYEKAHPXXXKXYCEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF*SYSAKTSLLEDFNFYGNKE 783
            NP   +   +       K Y EDDIH+ IKY +W ST +GNK+LD+ F    +K        P++L FSVNGSG F G+AEM   VD+      W  DKW G F V+W  +KDVPN  LRHI LENN+NKP  +SRDT E+ ++   ++LKI  SY   TS+ +DF  Y  ++
Sbjct:  378 NPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKG-------PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQ 543          
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.070e-38
Identity = 77/173 (44.51%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  265 NPPXXQXEYEKAHPXXXKXYCEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF*SYSAKTSLLEDFNFYGNKE 783
            NP       +       K Y EDDIH+ IKY +W ST +GNK+LDA +     K        P++L FSVNGSG F G+AEM   VD+N     W  DKW G F VKW  +KDVPN  LRHI LENN+NKP  +SRDT E+ ++   ++LKI  ++   TS+ +DF  Y  ++
Sbjct:  405 NPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG-------PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQ 570          
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 2.070e-38
Identity = 77/173 (44.51%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  265 NPPXXQXEYEKAHPXXXKXYCEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF*SYSAKTSLLEDFNFYGNKE 783
            NP       +       K Y EDDIH+ IKY +W ST +GNK+LDA +     K        P++L FSVNGSG F G+AEM   VD+N     W  DKW G F VKW  +KDVPN  LRHI LENN+NKP  +SRDT E+ ++   ++LKI  ++   TS+ +DF  Y  ++
Sbjct:  405 NPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG-------PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQ 570          
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.070e-38
Identity = 77/173 (44.51%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  265 NPPXXQXEYEKAHPXXXKXYCEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF*SYSAKTSLLEDFNFYGNKE 783
            NP       +       K Y EDDIH+ IKY +W ST +GNK+LDA +     K        P++L FSVNGSG F G+AEM   VD+N     W  DKW G F VKW  +KDVPN  LRHI LENN+NKP  +SRDT E+ ++   ++LKI  ++   TS+ +DF  Y  ++
Sbjct:  405 NPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG-------PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQ 570          
BLAST of EY660242 vs. ExPASy Swiss-Prot
Match: YD374_YEAST (YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.014e-17
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 1
Query:  361 VWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLD-KWNGFFPVKWHVIKDVPNTLLRHITLENNENKPCPHSRDTPEIGVKPGLEMLKIF 723
            +WSST  GNK+L   + +  + A        +FLFFS+N SG+F G+AEM+  +  + D   W+ + K+   F V+W +++D+ N  L+   + +NE KP  HSRDT EI    G+ ++ +F
Sbjct:  176 IWSSTHFGNKRLSEAYKKLNSGAK-------VFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLF 290          
The following BLAST results are available for this feature:
BLAST of EY660242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
YTHD2_MACFA7.600e-4144.32YTH domain family protein 2 OS=Macaca fascicularis... [more]
YTHD2_HUMAN7.600e-4144.32YTH domain family protein 2 OS=Homo sapiens GN=YTH... [more]
YTHD2_BOVIN7.600e-4144.32YTH domain family protein 2 OS=Bos taurus GN=YTHDF... [more]
YTHD1_MOUSE1.872e-3945.09YTH domain family protein 1 OS=Mus musculus GN=Yth... [more]
YTHD1_HUMAN1.585e-3844.51YTH domain family protein 1 OS=Homo sapiens GN=YTH... [more]
YTHD3_PONAB2.070e-3844.51YTH domain family protein 3 OS=Pongo abelii GN=YTH... [more]
YTHD3_MOUSE2.070e-3844.51YTH domain family protein 3 OS=Mus musculus GN=Yth... [more]
YTHD3_HUMAN2.070e-3844.51YTH domain family protein 3 OS=Homo sapiens GN=YTH... [more]
YD374_YEAST2.014e-1736.07YTH domain-containing protein YDR374C OS=Saccharom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660242 ID=EY660242; Name=EY660242; organism=Citrus sinensis; type=EST; length=959bp
CTCTGGTACCCTGCGGNCCTGTCCGGAATCCTTGCAACACCGAGGTTTCC
GGGCAAANTCTGACTANGAGGGGGTTTTGCACAAANGGGAGAAGGNGGAA
NGGAAANGANAGATAGTGANTCCGAAAAAAAAGTTTTAGAGCNGGAGGNN
NGGGAAGGCCAACNGAACNAANNCGGGGNCCAAGGGCAGAAAACCCCAGC
GCNNCNNNAGAGANNNCNGACAAAAAAAGAAGGGCCGAGNCCCACAGNAN
CNAGAGANCAANANAACCCACCAGANNNNCAAGNNGAGTATGAAAAAGCG
CACCCCNAGGNCANCAAGNCCTACTGTGAAGATGACATTCATAAGTGCAT
TAAATATGATGTATGGTCAAGTACTCCAAATGGCAATAAGAAGCTAGATG
CAACTTTCAATGAGGCAGAAGCAAAGGCAGATGAGACTGGCACAAGATGT
CCAATCTTCCTCTTCTTTTCGGTCAATGGAAGTGGACAATTTGTCGGCCT
AGCTGAGATGATGGGTAAGGTGGACTTCAACAAAGACATGGACTTCTGGC
AACTTGACAAGTGGAATGGGTTCTTTCCTGTTAAGTGGCATGTCATAAAA
GACGTCCCTAACACTCTGTTGCGGCATATTACCCTTGAAAATAATGAAAA
TAAGCCTTGCCCTCATAGCAGGGACACCCCAGAGATTGGGGTTAAGCCAG
GCTTAGAAATGCTGAAAATCTTTTAAAGTTACTCAGCAAAAACATCATTG
TTAGAGGATTTTAACTTCTATGGAAATAAAGAGAGGGCTTTTCACTGGCA
AAAAAAGCACAAGCCCGGCCCCTCTGCCAATGGATATATTTTAACGAGGA
GGATTCTCCAAAGCAAATTAAATCTGCCCAGAAGGAATTTATGAGGGCTC
ATATTCTTCTCCATCTTACCAAAATCTCTCCTTCTGCGGGCCCCCCAAAA
AAGGGAACT
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