EY660237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 1.741e-75 Identity = 154/250 (61.60%), Postives = 170/250 (68.00%), Query Frame = 2 Query: 98 WALPLWX*XLKNKFVISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRIKRCHSPSKGWYPPMWFDHEGSWG---MSAFLGPRPPFTFGWPPSLANLV 838 WALP VISSNS+AVKILYPIFWGLMTLSTF NDLEPTS+WLEV+FSI +VLSGL+LFTLLIGNIQVFLHAVMAKKRKMQ+ CRDMEWWM +ERQRW +GGEDE+ELI DLP GLRR IKRYLC DL+ KVPLF CDR +P VFSKD KIIRE DPV RM+FI+RGR+KR S SKG + G G +S L R PF PPS A V Sbjct: 386 WALP----------VISSNSLAVKILYPIFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDIKRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVKRIQSLSKGVLATSTLEPGGYLGDELLSWCL--RRPFLDRLPPSSATFV 623 HSP 2 Score: 23.483 bits (49), Expect = 1.741e-75 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3 Query: 69 VGRFLXLDVNGPFHYG 116 V + + LD NGPF YG Sbjct: 367 VNKPMCLDSNGPFRYG 382
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 8.021e-51 Identity = 114/243 (46.91%), Postives = 147/243 (60.49%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGR----------IKRCHSPSKGWYPPMWFDHEGSWGMSAFLGPRPPFTFGWPPSLANLV 838 ++SS S KIL+PIFWGLMTLSTFGN LE T+ W EV+F+I ++ SGL+L T+LIGNI+VFLHA +KK+ M L R++EWWM +YERQRWA M G DE E++++LPEGLRR IK +LCLDL+++VPLF CDRV+ L+F+K I +E D V RMLF+VRG +K C G + D SW + R PF PPS + LV Sbjct: 356 LVSSESRLEKILFPIFWGLMTLSTFGN-LESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLKMRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDGVKSCCMLGPGNFSG---DELLSWCL------RRPFVERLPPSSSTLV 588
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 3.865e-37 Identity = 77/187 (41.18%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRI 700 V+ S+ K Y +WGL LS G +L+ + E++F+I I +SGL+LF LLIGN+Q +L + ++ +M++ RD E WM YE+ RW G +E L+++LP+ LRR IKR+LCLDLLKKVPLF CDR+RP++++++ +IRE DPV MLF++RGR+ Sbjct: 332 VVESHDFWKKFFYCFWWGLRNLSALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPEDLRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRL 518
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.918e-36 Identity = 74/188 (39.36%), Postives = 117/188 (62.23%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRIK 703 ++SS + VK Y ++WGL LST G LE +++ +E++FSI + +SGL+LF LLIGN+Q +L ++ + +M++ RD E WM Y++ +W G DE L+++LP+ LRR IKR+LCL L+++VPLF C R++P +F++ ++RE DPV MLFI+RGR++ Sbjct: 357 IVSSQNFIVKYCYCLWWGLQNLSTLGQGLETSTYPMEIIFSISLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLE 544
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 7.289e-36 Identity = 72/188 (38.30%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRIK 703 ++SS S K + ++WGL LST G LE +++ EV+FSI + ++GL+LF LLIGN+Q +L ++ + +M++ RD E WM Y++ +W G DE L+++LP+ LRR IKR+LCL L+++VPLF C+R++P ++++ ++RE DPV MLFI+RGR++ Sbjct: 372 IVSSKSFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSIALAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLE 559
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 9.519e-36 Identity = 72/188 (38.30%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRIK 703 ++SS + K Y ++WGL LST G L+ +++ EV+FSI I ++GL+LF LLIGN+Q +L ++ + +M++ RD E WM Y++ +W G DE +++ LP+ LRR IKR+LCL+L+++VPLF C+R++P ++++ I+RE DPV MLFI+RGR++ Sbjct: 367 IVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTYPGEVLFSIAIAVAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLE 554
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.243e-35 Identity = 72/188 (38.30%), Postives = 115/188 (61.17%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRIK 703 ++SS + K Y ++WGL LST G L+ ++ EV+FSI I ++GL+LF LLIGN+Q +L ++ + +M++ RD E WM Y++ +W G DE +++ LP+ LRR IKR+LCL+L+++VPLF C+R++P +F++ I+RE DPV M+FI+RGR++ Sbjct: 361 IVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTFPGEVLFSIAIAIAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLE 548
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.243e-35 Identity = 72/188 (38.30%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRIK 703 ++SS + K + ++WGL LST G LE +++ EV+FSI + ++GL+LF LLIGN+Q +L ++ + +M++ RD E WM Y++ +W G DE L+++LP+ LRR IKR+LCL L+++VPLF C+R++P +F++ ++RE DPV MLFI+RGR++ Sbjct: 373 IVSSKNFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSITLAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLE 560
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 2.345e-34 Identity = 70/187 (37.43%), Postives = 111/187 (59.36%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRI 700 ++ S+ K Y +WGL LS G +L + E++F++ I +SGL+LF LLIGN+Q +L + ++ +M++ RD E WM YE+ +W G +E L+++LP+ LRR IKR+ CLDLLKKVPLF CD+++P++++++ IRE DPV MLF++RG++ Sbjct: 333 IVESDDFWKKFFYCFWWGLRNLSALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKL 519
BLAST of EY660237 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.164e-33 Identity = 69/187 (36.90%), Postives = 111/187 (59.36%), Query Frame = 2 Query: 140 VISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLWCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLLKKVPLFPXXXXXXXXXXCDRVRPLVFSKDGKIIRERDPVARMLFIVRGRI 700 V+ S K Y +WGL LS+ G +L+ +++ E+ F++ I ++GL+LF+ LIGN+Q +L + + +M++ RD E WM YE+ +W G DE L+ +LP+ LRR IKR+LCL LL +VP+F CDR++P++++++ I+RE DPV MLFI+RG++ Sbjct: 345 VVESQDFPQKFFYCFWWGLQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKL 531 The following BLAST results are available for this feature:
BLAST of EY660237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660237 ID=EY660237; Name=EY660237; organism=Citrus sinensis; type=EST; length=954bpback to top |