EY660232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660232 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.198e-23 Identity = 85/297 (28.62%), Postives = 129/297 (43.43%), Query Frame = 3 Query: 3 TRPKKANSETNITATLLDSGNLLVRQIGADGIAGPILWQSFDYPSNMLLPEMKLGINLKTGHEWYLSSWLSEQLPSPGAFRLGLNPNGSRELMVWRRGEVYWRSGEWKNGKFELAPELTEGTFTKQLDAYQFRFVTNENERYFSYSKKSNFILSRWLLNDLGQIEQFTRDTSGWIWET--TSP----CTTNYTMNATGVC-LNEKP-SNCRNGSEFFAPKK--------------GYMNVSFTGDQIDD--------------NAGLALSDCHAKCWTNCSCSAYSS--VFDNGTGC 779 T + N + A LL +GN ++R ++ A LWQSFDYP++ LLPEMKLG +LKTG +L+SW S PS G F L E +W RSG W +F PE ++L + F N E +++ +N I SR L+ G ++ T + S IW +SP C T C +N P NC G F P+ +S +GD + + + +C +C ++C+C+A+++ + + GTGC Sbjct: 120 TNLTRGNERLPVVAELLSNGNFVMRD-SSNNDASEYLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLPEFYLWHGIFPMHRSGPWNGVRFSGIPE------DQKLSYMVYNFTENSEEVAYTFRMTNNSIYSRLTLSSEGYFQRLTWNPSIGIWNRFWSSPVDPQCDTYIMCGPYAYCGVNTSPVCNCIQG---FNPRNIQQWDQRVWAGGCIRRTRLSCSGDGFTRMKNMKLPETTMAIVDRSIGVKECEKRCLSDCNCTAFANADIRNGGTGC 406
BLAST of EY660232 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23 Identity = 78/295 (26.44%), Postives = 128/295 (43.39%), Query Frame = 3 Query: 3 TRPKKANSETNITATLLDSGNLLVRQIGADGIAGPILWQSFDYPSNMLLPEMKLGINLKTGHEWYLSSWLSEQLPSPGAFRLGLNPNGSRELMVWRRGEVYWRSGEWKNGKFELAPELTEGTFTKQLDAYQFRFVTNENERYFSYSKKSNFILSRWLLNDLGQIEQFTRDTSGWIWETTSPCTTNYTMNATGVC-------LNEKP----------------------SNCRNGSEFFAPKKGY-----MNVSFTGDQIDDNAGLALSDCHAKCWTNCSCSAYSS--VFDNGTGC 779 T + N + + A LL +GN ++R + +G LWQSFDYP++ LLPEMKLG +L+TG +L+SW S PS G F L E +++ + RSG W F PE ++L + F N E +++ +N I SR ++ G E+ T S +W ++ + +C +N P CR + G+ M + T I D + + L +C +C ++C+C+A+++ + + GTGC Sbjct: 119 TNHTRGNERSPVVAELLANGNFVLRDSNKNDRSG-FLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEFYLFKDDFLVHRSGPWNGVGFSGMPE------DQKLSYMVYNFTQNSEEVAYTFLMTNNSIYSRLTISSSGYFERLTWTPSSGMWNVFWSSPEDFQCDVYKICGAYSYCDVNTSPVCNCIQRFDPSNVQEWGLRAWSGGCRRRTRLSCSGDGFTRMKKMKLPETTMAIVDRS-IGLKECEKRCLSDCNCTAFANADIRNGGTGC 405
BLAST of EY660232 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.861e-22 Identity = 84/309 (27.18%), Postives = 133/309 (43.04%), Query Frame = 3 Query: 3 TRPKKANSETNITATLLDSGNLLVRQIGADGIAGPILWQSFDYPSNMLLPEMKLGINLKTGHEWYLSSWLSEQLPSPGAFRLGLNPNGSRELMVWRRGEVYWRSGEWKNGKFELAPELTEGTFTKQLDAYQFRFVTNENERYFSYSKKSNFILSRWLLNDLGQIEQFTRDTSGWIWET--TSPCTTNYTMNATGVC-------LNEKP-SNCRNGSEFFAPKKGYM--------------NVSFTGDQIDD--------------NAGLALSDCHAKCWTNCSCSAYSS--VFDNGTGCEFLVREVQFI 809 T + N + + A LLD+GN ++R ++ A LWQSFDYP++ LLPEMKLG +LKTG +L+SW S PS G + L E + RSG W + PE ++L + F N E +++ +N SR ++ G E+ T S +W +SP N+ + +C +N P NC G F PK +S +GD + + L +C +C ++C+C+A+++ + + GTGC E++ I Sbjct: 120 TNVTRGNERSPVVAELLDNGNFVMRDSNSNN-ASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEFYLSSGSFRLHRSGPWNGFRISGIPE------DQKLSYMVYNFTENSEEAAYTFLMTNNSFYSRLTISSTGYFERLTWAPSSVVWNVFWSSP---NHQCDMYRMCGPYSYCDVNTSPVCNCIQG---FRPKNRQQWDLRIPTSGCIRRTRLSCSGDGFTRMKNMKLPETTMAIVHRSIGLKECEKRCLSDCNCTAFANADIRNRGTGCVIWTGELEDI 415
BLAST of EY660232 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.206e-21 Identity = 84/297 (28.28%), Postives = 128/297 (43.10%), Query Frame = 3 Query: 3 TRPKKANSETNITATLLDSGNLLVRQIGADGIAGPILWQSFDYPSNMLLPEMKLGINLKTGHEWYLSSWLSEQLPSPGAFRLGLNPNGSRELMVWRRGEVYWRSGEWKNGKFELAPELTEGTFTKQLDAYQFRFVTNENERYFSYSKKSNFILSRWLLNDLGQIEQFTRDTSGWIWET--TSP----CTTNYTMNATGVC-LNEKP-SNCRNGSEFFAPKK--------------GYMNVSFTGD--------------QIDDNAGLALSDCHAKCWTNCSCSAYSS--VFDNGTGC 779 T + N + + A LL +GN ++R ++ A LWQSFDYP++ LLPEMKLG NLKTG +L+SW S PS G F L E + R RSG W +F PE ++L + F+ N E +++ +N SR L G ++ T S IW +SP C T C +N P NC G F P+ +S +GD + + + +C +C ++C+C+A+++ + + G+GC Sbjct: 119 TNLTRGNERSPVVAELLANGNFVMRD-SSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRENFPMHRSGPWNGIRFSGIPE------DQKLSYMVYNFIENNEEVAYTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPYAYCDVNTSPVCNCIQG---FNPRNIQQWDQRVWAGGCIRRTQLSCSGDGFTRMKKMKLPETTMATVDRSIGVKECKKRCISDCNCTAFANADIRNGGSGC 405
BLAST of EY660232 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17 Identity = 77/303 (25.41%), Postives = 135/303 (44.55%), Query Frame = 3 Query: 3 TRPKKANSETNITATLLDSGNLLVRQIGADGIAGPILWQSFDYPSNMLLPEMKLGINLKTGHEWYLSSWLSEQLPSPGAFRLGLNPNGSRELMVWRRGEVYWRSGEWKNGKFELAPELTEGTFTKQLDAYQFRFVTNENERYFSYSKKSNFILSRWLLNDLGQIEQFTRDTSGWIWET------TSPCTT-------NY-TMNATGVC---LNEKPSNCR-----------------NGSEFFAPKKGYMNVSFTGDQIDDNAGLALSDCHAKCWTNCSCSAYSS--VFDNGTGCEFLVREVQ 803 T + N + + A +L +GN ++R + +G LWQSFD+P++ LLPEMKL +LKTG +L+S S PS G F L P E + + +RSG W +F P+ + ++ +++ + + + +N SR ++ G IEQ T + S +W + S C T +Y +N + +C PSN + +GS + M + T I D + + + +C +C +C+C+A+++ + + GTGC E++ Sbjct: 117 TNLTRGNERSPVVADVLANGNFVMRDSNNNDASG-FLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRLPEFYLSSGVFLLYRSGPWNGIRFSGLPDDQKLSYLV--------YISQDMRVAYKFRMTNNSFYSRLFVSFSGYIEQQTWNPSSQMWNSFWAFPLDSQCYTYRACGPYSYCVVNTSAICNCIQGFNPSNVQQWDQRVWAGGCIRRTRLSGSGDGFTRMKNMKLPETTMAIVDRS-IGVKECEKRCLNDCNCTAFANADIRNGGTGCVINTGELE 409
BLAST of EY660232 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16 Identity = 74/290 (25.52%), Postives = 125/290 (43.10%), Query Frame = 3 Query: 36 ITATLLDSGNLLVRQIGADGIAGPILWQSFDYPSNMLLPEMKLGINL-KTGHEWYLSSWLSEQLPSPGAFRLGLNPNG-SRELMVWRRGEVYWRSGEWKNGKFELAPELTEGTFTKQLDAYQFRFVTNENERYFSYSKKSNF-ILSRWLLNDLGQIE---------------QFTRDTSGWIWETTSPCT-----TNYTMNA-----------------TGVCLNEKPSNCRNGSEFFAPKKGYMNVSFTGDQIDDNAGLALSDCHAKCWTNCSCSAYSS--VFDNGTGC 779 +TA LL +GN ++R + + +WQSFDYP + LLPEMKLG NL + +E L+SW S PS G F L G E + + +R+G W +F P++ ++ F+ N E +S+ +N I +R+ ++ G ++ F DT +++ P T+ T N +G C+ +C G F + M + T + + D + L +C KC +C+C+ Y++ + + G+GC Sbjct: 134 VTAELLANGNFVLRDSKTNDL-DRFMWQSFDYPVDTLLPEMKLGRNLIGSENEKILTSWKSPTDPSSGDFSFILETEGFLHEFYLLKNEFKVYRTGPWNGVRFNGIPKMQNWSYIDN------SFIDNNEEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWSFPEDTCD-LYKVCGPYAYCDMHTSPTCNCIKGFVPKNAGRWDLRDMSGGCVRSSKLSCGEGDGFL--RMSQMKLPETSEAVVDKR-IGLKECREKCVRDCNCTGYANMDIMNGGSGC 412
BLAST of EY660232 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16 Identity = 73/290 (25.17%), Postives = 123/290 (42.41%), Query Frame = 3 Query: 36 ITATLLDSGNLLVRQIGADGIAGPILWQSFDYPSNMLLPEMKLGINLK-TGHEWYLSSWLSEQLPSPGAFRLGLNPNG-SRELMVWRRGEVYWRSGEWKNGKFELAPELTEGTFTKQLDAYQFRFVTNENERYFSYSKKSNF-ILSRWLLNDLGQIE---------------QFTRDTSGWIWETTSPCT-----TNYTMNA-----------------TGVCLNEKPSNCRNGSEFFAPKKGYMNVSFTGDQIDDNAGLALSDCHAKCWTNCSCSAYSS--VFDNGTGC 779 +TA LL +GN ++R + +WQSFDYP + LLPEMKLG N +G+E L+SW S PS G + L G E + +R+G W +F P++ ++ F+ N E +S+ +N I +R+ ++ G ++ F DT +++ P T+ T N +G C+ +C G F + M + T + + D + L +C KC +C+C+ Y++ + + G+GC Sbjct: 134 VTAELLANGNFVLRDSKTTAL-DRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILETEGFLHEFYLLNNEFKVYRTGPWNGVRFNGIPKMQNWSYIDN------SFIDNNKEVAYSFQVNNNHNIHTRFRMSSTGYLQVITWTKTVPQRNMFWSFPEDTCD-LYKVCGPYAYCDMHTSPTCNCIKGFVPKNAGRWDLRDMSGGCVRSSKLSCGEGDGFL--RMSQMKLPETSEAVVDKR-IGLKECREKCVRDCNCTGYANMDIMNGGSGC 412 The following BLAST results are available for this feature:
BLAST of EY660232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660232 ID=EY660232; Name=EY660232; organism=Citrus sinensis; type=EST; length=891bpback to top |