EY660230

Overview
NameEY660230
Unique NameEY660230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig936 contig Csv1_Contig936:17..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660230 vs. ExPASy Swiss-Prot
Match: ESYT3_XENTR (Extended synaptotagmin-3 OS=Xenopus tropicalis GN=esyt3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 42/137 (30.66%), Postives = 72/137 (52.55%), Query Frame = 2
Query:  209 LPEIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFP 613
            L ++P WV  PD +RV+WLNK +  MWPY+   + K  ++  +P++        +++  F  + LG   P   G+K Y    D++E+I++  L +  +  + + VK    KA V+ V  Q+    R+ L PL+P  P
Sbjct:  144 LQQLPAWVNFPDVERVEWLNKVVGQMWPYIGMYVEKMFQDKVEPLVRSS--SAHLKAFTFTKVHLGEKFPRINGVKSYTKNVDKREVILDLQLSYNGDVEINVEVKKM-CKAGVKGV--QLHGTLRVILAPLLPDLP 275          
BLAST of EY660230 vs. ExPASy Swiss-Prot
Match: EST2B_XENLA (Extended synaptotagmin-2-B OS=Xenopus laevis GN=esyt2-B PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 37/135 (27.41%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  215 EIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFP 613
            ++P WV  PD +R +WLNK ++ MWPY+ + I K  +   +P  A +     + +  F  + +G+ P    G+KVY    D++++I++  + +     + + VK +  +A V+   +Q+    R+ L+PL+   P
Sbjct:  114 DLPAWVHFPDIERAEWLNKTVKHMWPYICQFIEKLFRETIEP--AVRGANAHLSTFSFTKIDMGSQPLRINGVKVYTENVDKRQIILDLQISFVGETEIDLEVKRYFCRAGVK--SIQLHGTMRVILEPLIGDVP 244          
BLAST of EY660230 vs. ExPASy Swiss-Prot
Match: EST2A_XENLA (Extended synaptotagmin-2-A OS=Xenopus laevis GN=esyt2-A PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 37/135 (27.41%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  215 EIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFP 613
            ++P WV  PD +R +WLNK ++ MWPY+ + I K  +   +P  A +     + +  F  + +G+ P    G+KVY    D++++I++  + +     + + VK +  +A V+   +Q+    R+ L+PL+   P
Sbjct:  110 DLPAWVHFPDIERAEWLNKTVKHMWPYICQFIEKLFRETIEP--AVRGANAHLSTFNFTKIDMGSQPLRINGVKVYTENVDKRQIILDLQISFVGETEIDLEVKRYFCRAGVK--SIQLHGTMRVILEPLIGDVP 240          
BLAST of EY660230 vs. ExPASy Swiss-Prot
Match: ESYT2_HUMAN (Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 36/135 (26.67%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  215 EIPLWVKCPDYDRVDWLNKFLELMWPYLDKAICKTAKNIAKPIIAEQIPKYKIESVEFETLTLGTLPPTFQGMKVYV--TDEKELIMEPCLKWAANPNVTIGVKAFGLKATVQVVDLQVFAQPRITLKPLVPAFP 613
            ++P WV  PD +R +WLNK ++ MWP++ + I K  +   +P  A +     + +  F  + +G  P    G+KVY    D++++I++  + +  N  + + +K +  +A V+   +Q+    R+ L+PL+   P
Sbjct:  182 DLPAWVHFPDTERAEWLNKTVKHMWPFICQFIEKLFRETIEP--AVRGANTHLSTFSFTKVDVGQQPLRINGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYFCRAGVK--SIQIHGTMRVILEPLIGDMP 312          
The following BLAST results are available for this feature:
BLAST of EY660230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ESYT3_XENTR2.339e-1130.66Extended synaptotagmin-3 OS=Xenopus tropicalis GN=... [more]
EST2B_XENLA3.989e-1127.41Extended synaptotagmin-2-B OS=Xenopus laevis GN=es... [more]
EST2A_XENLA3.989e-1127.41Extended synaptotagmin-2-A OS=Xenopus laevis GN=es... [more]
ESYT2_HUMAN8.887e-1126.67Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660230 ID=EY660230; Name=EY660230; organism=Citrus sinensis; type=EST; length=852bp
AAAGGCTGTTTGGATACCGAGAAATTAACCGAGAAAGTGAGAAATGGGAG
TTATCAGTACAATCTTCGGTTTTTGTGGATTTGGCGTCGGGATTTCGTCG
GGGCTTGTGATTGGTTACTTCCTTTTCATCTACTTTCAACCAACCGACGT
GAAGAATCCTGAGATTCGCCCGTTGGTTGAGCGAGATTCTGAGACTCTGC
AGCAGATGCTTCCAGAGATACCTCTTTGGGTGAAATGTCCCGACTATGAT
CGCGTTGATTGGCTGAATAAGTTCCTTGAATTAATGTGGCCTTATCTTGA
CAAGGCTATTTGTAAGACTGCGAAGAATATTGCAAAGCCTATAATTGCAG
AACAAATTCCTAAGTATAAAATCGAGTCTGTTGAATTTGAAACTCTTACA
TTAGGGACTCTACCACCAACTTTTCAAGGTATGAAAGTTTATGTCACTGA
TGAGAAGGAGTTGATTATGGAACCATGCTTAAAGTGGGCTGCAAATCCTA
ATGTAACCATTGGTGTTAAAGCATTTGGTTTGAAGGCAACAGTTCAGGTG
GTGGATTTGCAAGTTTTTGCTCAACCACGCATTACTCTGAAGCCCTTGGT
CCCTGCTTTTCCTTGTTTTGCCGAATATTTATGTGTCTCTCATGGAGAAG
CCTCATGTTGACTTTGGACCTGAGCTAGTAGGGGCTGATCTTATGTCAAT
TCCTGGTCTCTATAGGTTTGCTCAGGAGCTTATCAAAACTCACGTGGCCA
ACATGTACCTGTGGCCCAAAACCCTAGAAGTACCATTTTTGATCCATCCA
AGCTTACCGGAGACTCGTGGAAATCTCCCATGTGACGTTGTGCAGCGCAT
GA
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