EY660227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.462e-30 Identity = 71/146 (48.63%), Postives = 88/146 (60.27%), Query Frame = 3 Query: 441 RLLLDTEPSTPPTNGSRTRSTVSNEANFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCSRRFAFE-------TPNETAARLAAR-GLKKSALRQIPVAVYGAAGVKIKATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWLM 854 RLLL+ + + P + + + N+ FDTNMV LNS +RC LR +RRF + N RLAA GLKK AL+QIPV +YG+ + +KAT+C ICL DF DGEKVRVLPKCNHG HVRCIDTWL+ Sbjct: 3 RLLLEPQANAPANANPKPKGGI-NDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLL 147
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL5A_ARATH (RING-H2 finger protein ATL5A OS=Arabidopsis thaliana GN=ATL5A PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.676e-28 Identity = 66/139 (47.48%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 438 HRLLLDTEPSTPPTNGSRTRSTVSNEANFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCSRRFAFETPNETAARLAARGLKKSALRQIPVAVYGAAGVKIKATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWLM 854 HRLLL++ T+GS + + NFD NMV GLNSI+RCA+RC + T A A GLKK L++ PVA YG+ VKI AT+CAICL +F DGE+VRVLP CNH H+ CIDTWL+ Sbjct: 2 HRLLLESHGGGNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVADRA--GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLV 138
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.399e-26 Identity = 65/131 (49.62%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 465 STPPTNGSRTRSTVSNEANFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCSRRFA-FETPNETAARLAARGLKKSALRQIPVAVYGAAGVKIKATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWLM 854 + P T G S N A+ DT+MV G+NS++RC LRC+RRF E P +T A +A +G+KK AL+ IPV Y +K+KAT+C ICL DF++GE VRVLPKCNHG HV+CIDTWL+ Sbjct: 19 ANPRTLGDSV-SNNKNIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVA-KGIKKRALKVIPVDSYSPE-LKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLL 146 HSP 2 Score: 22.7126 bits (47), Expect = 1.399e-26 Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2 Query: 854 AHSSCPTC 877 +HSSCPTC Sbjct: 147 SHSSCPTC 154
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL1L_ARATH (RING-H2 finger protein ATL1L OS=Arabidopsis thaliana GN=ATL1L PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.075e-18 Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 441 RLLLDTEPSTPPTNGSRTRSTVSNEANFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCSRRFAFETPNET-AARLAARGLKKSALRQIPVAVYGAA-GVKIKATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWL 851 +LL T +P + S + NFD N+V GLNSI+RCALRCS E + RL G+K+ AL+ Y + T+CAICL +F+ E+V++LP C+HG HVRCID WL Sbjct: 29 KLLFHTHDQSP----TPAPSPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWL 163 HSP 2 Score: 25.0238 bits (53), Expect = 1.075e-18 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 848 VDAHSSCPTCGGHCWI 895 + +HSSCPTC HC I Sbjct: 163 LSSHSSCPTC-RHCLI 177
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL1J_ARATH (RING-H2 finger protein ATL1J OS=Arabidopsis thaliana GN=ATL1J PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.811e-18 Identity = 49/122 (40.16%), Postives = 65/122 (53.28%), Query Frame = 3 Query: 504 VSNEANFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCSRRFAFETPNE---TAARLAARGLKKSALRQIPVAVYGAA-GVKIKATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWLMH 857 +++E N N++ GL+ I+RCA R S RF P T + +G+KK ALR PV Y + +C ICL DF+ GE++R+LPKCNHG HVRCID WL H Sbjct: 48 ITHENNLKGNVLMLLSVLICGIICCLGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQH 169
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL1K_ARATH (RING-H2 finger protein ATL1K OS=Arabidopsis thaliana GN=ATL1K PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.068e-17 Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 504 VSNEANFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCSRRFAFETPNETAARLAA---RGLKKSALRQIPVAVYGAAGVKIKATD--CAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWL 851 +++E N N++ GL+ I+RCALR S RF P + + +G+KK ALR PV Y + + D C ICL DF+ GE++R+LPKCNHG HVRCID WL Sbjct: 48 ITHENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPE-MNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWL 167
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL1I_ARATH (RING-H2 finger protein ATL1I OS=Arabidopsis thaliana GN=ATL1I PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15 Identity = 44/120 (36.67%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 504 VSNEANFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCSRRFAFETPN---ETAARLAARGLKKSALRQIPVAVYGAA-GVKIKATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWL 851 +++E N N++ GL+ I+RCA R + F P T + +G+ K ALR PV Y + +C ICL DF+ GE++R+LPKC+HG HVRCID WL Sbjct: 49 ITHENNLSGNVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWL 168
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL2A_ARATH (RING-H2 finger protein ATL2A OS=Arabidopsis thaliana GN=ATL2A PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15 Identity = 55/150 (36.67%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 432 RPHRLLLDTEPSTPPTNGSRTRSTVSNEANFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCSRRFAF--ETPNETAARLAARGLKKSALRQIPVAVY-------GAAGVKIKATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWLM 854 RP RLL E + PP S +++MV GL ++VRCA RRF ++P+ +GLKK AL+ +P + + GAA + +T+CAICL DF DGE++RVLP C H HV CID WL+ Sbjct: 3 RPSRLL---ETAAPPPQPSEEMIAA------ESDMVVILSALLCALICVAGLAAVVRCAWL--RRFTAGGDSPSPN------KGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLV 135
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL1R_ARATH (RING-H2 finger protein ATL1R OS=Arabidopsis thaliana GN=ATL1R PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.438e-13 Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 3 Query: 498 STVSNEAN--FDTNMVXXXXXXXXXXXXXXGLNSIVRCAL--RCSRRFAFETPNETAARLAARGLKKSALRQIPVAVYGAAGVKI-KATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWL 851 ST EA+ F++++V GL ++ RCA R + R + + A +GLKK LR +P Y K +CAICL +F G+++RVLP+C HG HV CIDTWL Sbjct: 14 STSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWL 136 HSP 2 Score: 21.1718 bits (43), Expect = 2.438e-13 Identity = 6/8 (75.00%), Postives = 8/8 (100.00%), Query Frame = 2 Query: 854 AHSSCPTC 877 +HSSCP+C Sbjct: 138 SHSSCPSC 145
BLAST of EY660227 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.144e-11 Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 3 Query: 642 PNETAARLAARGLKKSALRQIPVAVYGAAGVKIKATDCAICLVDFMDGEKVRVLPKCNHGVHVRCIDTWL 851 PN+T GL +S ++ I V Y ++++DC++CL +F + E +R+LPKCNH HV CIDTWL Sbjct: 122 PNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWL 191 The following BLAST results are available for this feature:
BLAST of EY660227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660227 ID=EY660227; Name=EY660227; organism=Citrus sinensis; type=EST; length=897bpback to top |