EY660224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660224 vs. ExPASy Swiss-Prot
Match: CAO_ORYSJ (Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.192e-32 Identity = 59/68 (86.76%), Postives = 65/68 (95.59%), Query Frame = 3 Query: 459 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGELE*QNTRQCATHLQQLHECLPSSRNK 662 SLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG+LE ++T+QC+THL QLH CLPSSRNK Sbjct: 383 SLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHICLPSSRNK 450 HSP 2 Score: 27.335 bits (59), Expect = 9.192e-32 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 662 TRLLYRMSLDFA 697 TRLLYRMSLDFA Sbjct: 451 TRLLYRMSLDFA 462 HSP 3 Score: 21.1718 bits (43), Expect = 9.192e-32 Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 1 Query: 706 QHVPCMQYL*RDFAEPVLS 762 +HVP M L FAE VL+ Sbjct: 466 KHVPFMHILWSHFAEKVLN 484
BLAST of EY660224 vs. ExPASy Swiss-Prot
Match: CAO_ARATH (Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.205e-31 Identity = 57/68 (83.82%), Postives = 64/68 (94.12%), Query Frame = 3 Query: 459 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGELE*QNTRQCATHLQQLHECLPSSRNK 662 SLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISKPG+LE ++T+QCATHL QLH CLPSS+NK Sbjct: 384 SLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSKNK 451 HSP 2 Score: 30.0314 bits (66), Expect = 2.205e-31 Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 653 KK*TRLLYRMSLDFASVL 706 K TRLLYRMSLDFA +L Sbjct: 449 KNKTRLLYRMSLDFAPIL 466
BLAST of EY660224 vs. ExPASy Swiss-Prot
Match: CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.728e-15 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 492 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGE-LE*QNTRQCATHLQQLHECLPSSR 656 L G+WDPYPIDM F+PPCM LSTIG+++PG+ + QC HL QLH C+PS + Sbjct: 480 LSGFWDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKK 535 HSP 2 Score: 25.7942 bits (55), Expect = 3.728e-15 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 662 TRLLYRMSLDF 694 TRLLYRMSLDF Sbjct: 538 TRLLYRMSLDF 548
BLAST of EY660224 vs. ExPASy Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.176e-13 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 3 Query: 492 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGE-LE*QNTRQCATHLQQLHECLPS 650 L G WDPYPI M F PPC+ LSTIG+S+PG+ + +C HL QLH C+PS Sbjct: 309 LAGDWDPYPISMSFNPPCIALSTIGLSQPGKIMRGYKAEECKRHLHQLHVCMPS 362 HSP 2 Score: 25.7942 bits (55), Expect = 4.176e-13 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 662 TRLLYRMSLDF 694 TRLLYRMSLDF Sbjct: 367 TRLLYRMSLDF 377 The following BLAST results are available for this feature:
BLAST of EY660224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660224 ID=EY660224; Name=EY660224; organism=Citrus sinensis; type=EST; length=910bpback to top |