EY660219

Overview
NameEY660219
Unique NameEY660219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7546 contig Csv1_Contig7546:1..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SEC22_ARATH (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 1.237e-106
Identity = 179/188 (95.21%), Postives = 185/188 (98.40%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            MVKMT+IARVTDGLPLAEGLDDGRDL D++MYKQQVKALFKNLSRGQN+ASRMS+ETGPYVFHYIIEGRVCYLTMCDR+YPKKLAFQYLEDLKNEFERVNG  IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL
Sbjct:    1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 188          

HSP 2 Score: 48.1358 bits (113), Expect = 1.237e-106
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 2
Query:  686 KRFDRQALIRKWAPVAIXCGVVFIVFWLK 772
            K  +RQALIRKWAPVAI  GVVF++FW+K
Sbjct:  186 KDLNRQALIRKWAPVAIVFGVVFLLFWVK 214          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22B_RAT (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.310e-46
Identity = 94/189 (49.74%), Postives = 130/189 (68.78%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22B_PONAB (Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.310e-46
Identity = 94/189 (49.74%), Postives = 130/189 (68.78%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22B_MOUSE (Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.310e-46
Identity = 94/189 (49.74%), Postives = 130/189 (68.78%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22B_HUMAN (Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.310e-46
Identity = 94/189 (49.74%), Postives = 130/189 (68.78%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22B_CHICK (Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.323e-46
Identity = 93/189 (49.21%), Postives = 131/189 (69.31%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL++EF+  +G ++ T +RPY+FI+FDT+IQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFIEFDTYIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22B_CRIGR (Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 2.145e-45
Identity = 93/189 (49.21%), Postives = 129/189 (68.25%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++  G   FHYIIE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+  +N EL +V +IM  N++EVL  GE L  +   ++ L+S S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL 187          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: S22BB_DANRE (Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44
Identity = 90/192 (46.88%), Postives = 128/192 (66.67%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGLDDGRDL-RDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLIDR 704
            MV +TMIAR+ DGLPLA  + +   + RD + Y+ Q K LF+ L+  +   +R ++E G   FHY+IE  VCYL +C+  +PKKLAF YLEDL+ EF   +G ++ T +RPY+FI+FDT+IQKTKK Y D+R +RN++ +N EL +V +IM  N++EVL  GE L  +   +S L+S S+ Y   AK L  R
Sbjct:    1 MVLLTMIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLN--EQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQKTKKSYIDSRARRNLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTR 190          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: SC22B_XENTR (Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.901e-44
Identity = 90/189 (47.62%), Postives = 129/189 (68.25%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDL 695
            MV +TMIARV DGLPLA  + +D +  RD + Y+ Q K LF+ L+  +   +R ++E G   FHY+IE  VCYL +C+ A+PKKLAF YLEDL +EF+  +G ++ T +RPY+FI+FD +IQKTKK Y D+R +RN++ +N EL +V +IM  N++EVL  GE L  +   +S L++ S+ Y   AK L
Sbjct:    1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQNQAKQLFRKLN--EQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRPYSFIEFDNYIQKTKKSYIDSRARRNLSSVNTELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLSKKYRQDAKYL 187          
BLAST of EY660219 vs. ExPASy Swiss-Prot
Match: S22BA_DANRE (Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.102e-41
Identity = 88/192 (45.83%), Postives = 124/192 (64.58%), Query Frame = 3
Query:  132 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLIDR 704
            MV  TMI RV D LPLA  + +D +  RD + Y+ Q K L + L+  +   +R ++E G   FHY+IE  VCYL +C+  +PKKLAF YLEDL+ EF    GA++ + +RPY+FI+FDT+IQKT K Y D+R +RN+  +N EL++V +IM  N++EVL  GE L  +   +S L+S S+ Y   AK L  R
Sbjct:    1 MVLQTMIVRVADSLPLAASMQEDEQSGRDLQKYQSQAKQLCRKLN--EQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFSEQYGAKVPSVSRPYSFIEFDTYIQKTIKSYIDSRARRNLGNINSELHDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTR 190          
The following BLAST results are available for this feature:
BLAST of EY660219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SEC22_ARATH1.237e-10695.2125.3 kDa vesicle transport protein OS=Arabidopsis ... [more]
SC22B_RAT3.310e-4649.74Vesicle-trafficking protein SEC22b OS=Rattus norve... [more]
SC22B_PONAB3.310e-4649.74Vesicle-trafficking protein SEC22b OS=Pongo abelii... [more]
SC22B_MOUSE3.310e-4649.74Vesicle-trafficking protein SEC22b OS=Mus musculus... [more]
SC22B_HUMAN3.310e-4649.74Vesicle-trafficking protein SEC22b OS=Homo sapiens... [more]
SC22B_CHICK4.323e-4649.21Vesicle-trafficking protein SEC22b OS=Gallus gallu... [more]
SC22B_CRIGR2.145e-4549.21Vesicle-trafficking protein SEC22b OS=Cricetulus g... [more]
S22BB_DANRE3.098e-4446.88Vesicle-trafficking protein SEC22b-B OS=Danio reri... [more]
SC22B_XENTR6.901e-4447.62Vesicle-trafficking protein SEC22b OS=Xenopus trop... [more]
S22BA_DANRE1.102e-4145.83Vesicle-trafficking protein SEC22b-A OS=Danio reri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660219 ID=EY660219; Name=EY660219; organism=Citrus sinensis; type=EST; length=917bp
CCACGCGTCCGCTCTTTTCTCTCTGTCGATCCTTGTCTTCTCTCTTCTTC
AGATCGTTGAATTCGCGTAGAAAATCCCAAATGCAAAAAGGGTGATTTGG
TGTAGCAGAGGAATTTTAAAGTGAGGCAAAAATGGTGAAGATGACGATGA
TTGCCCGTGTTACTGATGGTCTTCCATTGGCGGAGGGACTGGATGATGGT
CGTGATTTGAGAGATGCTGAGATGTACAAGCAACAAGTCAAGGCCTTGTT
TAAGAATCTCTCGAGAGGCCAGAATGAGGCTTCAAGGATGTCAATTGAGA
CAGGACCTTATGTTTTCCATTATATCATTGAAGGACGTGTTTGTTACTTG
ACAATGTGCGACCGTGCTTATCCCAAAAAGCTGGCCTTTCAATACTTGGA
AGACCTCAAGAACGAATTTGAGCGTGTTAATGGGGCTCAGATTGAAACTG
CTGCCAGGCCTTATGCTTTCATAAAATTTGATACATTCATACAGAAAACA
AAGAAATTGTACCAGGACACACGTACCCAGCGGAATATTGCAAAGTTGAA
TGATGAACTTTATGAGGTCCACCAGATAATGACCCGGAATGTGCAGGAAG
TTCTTGGTGTTGGTGAAAAGTTGGACCAGGTCAGTGAAATGTCCAGTCGG
TTGACATCAGAGTCGCGCATTTATGCTGATAAGGCAAAAGATTTGATCGA
CAGGCTTTAATTCGGAAATGGGCTCCTGTGGCCATTGNNTGTGGGGTGGT
CTTCATTGTCTTTTGGCTCAAAAAAAGCTATGGTGATTCAGTTGCCCCTA
TGCCGNTCTAATAGTTGCACATTGTGCCTGGGTTCCTCTGCGTCAATGTG
GGGTGCTGGGTGTCCTGGCTCCGTGTCAACACTTCAAAGCATCAGATTTC
ATCGACACTTGTTCTGN
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